Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Habropoda_20laboriosa_20[refseq_20GCF_5F001263275.1_202015-08-13] 27,566 sequences; 296,954,667 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq66 89.7 1e-12 >seq66 Length=2158695 Score = 89.7 bits (98), Expect = 1e-12 Identities = 184/269 (68%), Gaps = 6/269 (2%) Strand=Plus/Minus Query 297437 GTGAAAATATATCGTGCACTCGCGTGATCCTTACCACCCTGCAATCTCGAACCGAACTGG 297496 |||||||||||||| | |||||| ||| || || ||| | ||||| ||| || || Sbjct 994917 GTGAAAATATATCGAGGACTCGCTGCATCTTTTCCTCCCGTGAGTCTCGTACCAAATTGA 994858 Query 297497 CCCTCCGGCAACAACCAGTTGATGTTATTGCTTCCGACATAATCCTGTGCAAGGTTCACG 297556 || | || | || |||||||| ||||| ||| ||| |||||||| || | Sbjct 994857 CCATTTGGTTGAAGTATATTTATGTTATTACTTCCTACAAAATTTTGTGCAAGATTAATA 994798 Query 297557 ATGGTCCCTTGCAGAGATGCTTCGCCATGGTGATAGGCGCTATGCTCTGCAACGTAACC- 297615 || ||| ||||| |||| ||||| ||||| || ||| || ||||| |||| Sbjct 994797 ATAGTCGACATAAGAGAAACTTCACCATGATGATACGCTGAATGTTCAGCAACAGAACCA 994738 Query 297616 GCTGAACTGTGCAACCTTCACGT--CGGTCGTCAAATTGCGCTTGAAAGCTGAATATATC 297673 ||| || ||||| || ||||| | || | || || || || ||| | ||| | | Sbjct 994737 GCT-AATTGTGCCACTTTCACTTCACGTTTATC--GTTACGTTTTAAACAAGTATACACC 994681 Query 297674 ACTTTCCGTTGAGAAGGTTTGAAACCATC 297702 ||||||| || ||||||||||||||| Sbjct 994680 ACTTTCCTCTGGCCAGGTTTGAAACCATC 994652 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102490474502100