Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Habropoda_20laboriosa_20[refseq_20GCF_5F001263275.1_202015-08-13]
27,566 sequences; 296,954,667 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq66 89.7 1e-12
>seq66
Length=2158695
Score = 89.7 bits (98), Expect = 1e-12
Identities = 184/269 (68%), Gaps = 6/269 (2%)
Strand=Plus/Minus
Query 297437 GTGAAAATATATCGTGCACTCGCGTGATCCTTACCACCCTGCAATCTCGAACCGAACTGG 297496
|||||||||||||| | |||||| ||| || || ||| | ||||| ||| || ||
Sbjct 994917 GTGAAAATATATCGAGGACTCGCTGCATCTTTTCCTCCCGTGAGTCTCGTACCAAATTGA 994858
Query 297497 CCCTCCGGCAACAACCAGTTGATGTTATTGCTTCCGACATAATCCTGTGCAAGGTTCACG 297556
|| | || | || |||||||| ||||| ||| ||| |||||||| || |
Sbjct 994857 CCATTTGGTTGAAGTATATTTATGTTATTACTTCCTACAAAATTTTGTGCAAGATTAATA 994798
Query 297557 ATGGTCCCTTGCAGAGATGCTTCGCCATGGTGATAGGCGCTATGCTCTGCAACGTAACC- 297615
|| ||| ||||| |||| ||||| ||||| || ||| || ||||| ||||
Sbjct 994797 ATAGTCGACATAAGAGAAACTTCACCATGATGATACGCTGAATGTTCAGCAACAGAACCA 994738
Query 297616 GCTGAACTGTGCAACCTTCACGT--CGGTCGTCAAATTGCGCTTGAAAGCTGAATATATC 297673
||| || ||||| || ||||| | || | || || || || ||| | ||| | |
Sbjct 994737 GCT-AATTGTGCCACTTTCACTTCACGTTTATC--GTTACGTTTTAAACAAGTATACACC 994681
Query 297674 ACTTTCCGTTGAGAAGGTTTGAAACCATC 297702
||||||| || |||||||||||||||
Sbjct 994680 ACTTTCCTCTGGCCAGGTTTGAAACCATC 994652
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102490474502100
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |