Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Habropoda_20laboriosa_20[refseq_20GCF_5F001263275.1_202015-08-13] 27,566 sequences; 296,954,667 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq65 93.3 4e-14 seq59 82.4 8e-11 >seq65 Length=771584 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || ||||| | ||||| || || || | | ||||| ||||| || ||||| || Sbjct 537352 CCTCCTCGGAGTCGCAACACCAAGTGCAGTGTGGACTCTTTTTGGATATTGTAATCTGAA 537293 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || ||| || || | |||||| || | | |||| | |||||| ||||| ||||| Sbjct 537292 AGGGTGCGCCCATCTTCCAATTGTTTGCCAGCAAAGATCAAACGCTGCTGGTCGGGAGGG 537233 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA-TTGTTCCACGGTGTCGGTCGACTCCAC 138566 |||||||||||||| ||| | || | |||| | ||| | ||||| | | ||| || Sbjct 537232 ATACCTTCTTTGTC-TTGAATCTTGGCCTTAACGTTTTCTATTGTGTCTGAAGCCTCAAC 537174 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| || | ||||| || ||||| || || || || |||||||| Sbjct 537173 TTCGAGTGTGATGGTTTTCCCCGTCAGCGTCTTAACGAAGATCTGCAT 537126 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || ||||| | ||||| || || || | | ||||| || || |||||||| || Sbjct 538948 CCTCCTCGGAGTCGCAACACCAAGTGCAGTGTCGACTCTTTCTGGATGTTGTAATCTGAA 538889 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| || || || || |||||||| | | |||| | |||||| ||||| ||||| Sbjct 538888 AGAGTGCGACCATCTTCCAGCTGTTTACCAGCAAAGATCAAACGCTGCTGGTCAGGAGGG 538829 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA-TTGTTCCACGGTGTCGGTCGACTCCAC 138566 || ||||||||||| ||| | || | ||||| | || | ||||| | | ||| || Sbjct 538828 ATTCCTTCTTTGTC-TTGAATCTTGGCTTTAACGTTCTCTATTGTGTCTGAAGCCTCAAC 538770 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | ||||| || ||||| || || ||||| |||||||| Sbjct 538769 TTCCAGGGTGATGGTTTTCCCCGTCAGCGTCTTGACAAAGATCTGCAT 538722 Score = 89.7 bits (98), Expect = 5e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || ||||| | ||||| || || || | | | ||||||||||| || ||||| || Sbjct 537124 CCTCCTCGGAGTCGCAACACCAAGTGCAGGGTGGACTCCTTTTGGATATTGTAATCTGAA 537065 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || ||| || || | |||||||| | | |||| | |||||| ||||| ||||| Sbjct 537064 AGTGTGCGCCCATCTTCCAACTGTTTACCAGCAAAGATCAAACGCTGCTGGTCGGGAGGG 537005 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA-TTGTTCCACGGTGTCGGTCGACTCCAC 138566 || ||||||||||| ||| | || | |||| | || | ||||| | | ||| || Sbjct 537004 ATTCCTTCTTTGTC-TTGAATCTTGGCCTTAACGTTCTCTATTGTGTCTGAAGCCTCAAC 536946 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| || | ||||| || || || || || || || |||||||| Sbjct 536945 TTCGAGTGTGATGGTTTTCCCTGTGAGCGTCTTGACGAAGATCTGCAT 536898 Score = 89.7 bits (98), Expect = 5e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || ||||| | ||||| || || || | | ||||| ||||| |||||||| || Sbjct 537580 CCTCCTCGGAGTCGCAACACCAAGTGCAGTGTGGACTCTTTTTGGATGTTGTAATCTGAA 537521 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| ||| || || | ||||| || | | |||||| |||||| ||||| ||||| Sbjct 537520 AGAGTGCGCCCATCTTCCAACTGTTTGCCAGCAAAGATTAAACGCTGCTGGTCGGGAGGG 537461 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA-TTGTTCCACGGTGTCGGTCGACTCCAC 138566 || ||||||||||| ||| | || | |||| | || | ||||| | | || || Sbjct 537460 ATTCCTTCTTTGTC-TTGAATCTTGGCCTTAACGTTCTCTATTGTGTCTGAGGCTTCTAC 537402 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||| | || | ||||| || || || || || ||||| |||||||| Sbjct 537401 CTCCAAGGTGATGGTTTTCCCTGTGAGCGTCTTGACAAAGATCTGCAT 537354 Score = 89.7 bits (98), Expect = 5e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || ||||| | ||||| || ||||| | | | || |||||||| ||||| || || Sbjct 537808 CCTCCTCGGAGTCGCAACACCAAATGCAGGGTGGATTCCTTTTGGATGTTATAATCTGAA 537749 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| ||| || || | ||||| || | | |||| | |||||| ||||| ||||| Sbjct 537748 AGAGTGCGCCCATCTTCTAACTGTTTGCCAGCAAAGATCAAACGCTGCTGGTCGGGAGGG 537689 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA-TTGTTCCACGGTGTCGGTCGACTCCAC 138566 || ||||||||||| ||| | || | |||| | || | ||||| | | || || Sbjct 537688 ATTCCTTCTTTGTC-TTGAATCTTGGCCTTAACGTTCTCTATTGTGTCTGAGGCTTCTAC 537630 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||| | || | ||||| || || || || || ||||| |||||||| Sbjct 537629 CTCCAAGGTGATGGTTTTCCCTGTGAGCGTCTTGACAAAGATCTGCAT 537582 Score = 89.7 bits (98), Expect = 5e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 ||||| || | ||||| ||||| || | | ||||||||||| ||||| || || Sbjct 538036 CCGCCACGGAGTCGCAACACTAAGTGCAGTGTGGACTCCTTTTGGATGTTATAATCTGAA 537977 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || ||| || || | ||||| || | | |||| | |||||| ||||| ||||| Sbjct 537976 AGTGTGCGCCCATCTTCCAACTGTTTGCCAGCAAAGATCAAACGCTGCTGGTCGGGAGGG 537917 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA-TTGTTCCACGGTGTCGGTCGACTCCAC 138566 || ||||||||||| ||| | || | |||| | || | ||||| | | ||| || Sbjct 537916 ATTCCTTCTTTGTC-TTGAATCTTGGCCTTAACGTTCTCTATTGTGTCTGAAGCCTCAAC 537858 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | ||||| || || || ||||| ||||| |||||||| Sbjct 537857 GTCCAGGGTGATGGTTTTCCCCGTGAGCGTTTTGACAAAGATCTGCAT 537810 Score = 86.0 bits (94), Expect = 6e-12 Identities = 150/216 (69%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 138400 CGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAG 138459 ||||| || || || | | ||||| ||||| || ||||| || | ||| ||| Sbjct 536656 CGCAATACCAAGTGCAATGTGGACTCTTTTTGGATATTGTAATCTGAAAGAGTGCGCCCA 536597 Query 138460 TCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTG 138519 || || | |||||||| | | |||| | |||||| ||||| ||||| || ||||||||| Sbjct 536596 TCTTCCAACTGTTTACCAGCAAAGATCAAACGCTGCTGGTCGGGAGGGATTCCTTCTTTG 536537 Query 138520 TCGGTGATTTTTTGTTTTAA-TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAG 138578 || ||| | || | |||| | ||| | ||||| | | ||| || |||| || | Sbjct 536536 TC-TTGAATCTTGGCCTTAACGTTTTCTATTGTGTCTGAAGCCTCAACTTCGAGTGTGAT 536478 Query 138579 CGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||| || || || || || || || |||||||| Sbjct 536477 GGTTTTCCCTGTGAGCGTCTTGACGAAGATCTGCAT 536442 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || ||||| | ||||| || || || | | ||||| ||||| || ||||| || Sbjct 536896 CCTCCTCGGAGTCGCAACACCAAGTGCAGTGTGGACTCTTTTTGGATATTGTAATCTGAA 536837 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || ||| || || | |||||| || | | |||| | |||||| ||||| ||||| Sbjct 536836 AGTGTGCGCCCATCTTCCAATTGTTTGCCAGCAAAGATCAAACGCTGCTGGTCGGGAGGG 536777 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA-TTGTTCCACGGTGTCGGTCGACTCCAC 138566 || ||||||||||| ||| | || | |||| | ||| | ||||| | | ||| || Sbjct 536776 ATTCCTTCTTTGTC-TTGAATCTTGGCCTTAACGTTTTCTATTGTGTCTGAAGCCTCAAC 536718 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||| || | ||||| || || || || || || || |||||||| Sbjct 536717 TTCGAGTGTGATGGTTTTCCCTGTGAGCGTCTTGACGAAGATCTGCAT 536670 >seq59 Length=4191719 Score = 82.4 bits (90), Expect = 8e-11 Identities = 149/218 (68%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 153030 TTGACCACTTGAAACTCGCCCGCCAACACTCGTCTCAAATATACATTGCTAGTGAAAGGT 153089 || || ||||||||||| || | ||| |||| ||| ||| | ||| |||| | ||| Sbjct 764720 TTAACAACTTGAAACTCTCCAGACAAAACTCTTCTTGTATAAATATTATTAGTATAGGGT 764661 Query 153090 TCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTTGCGGTCGGCATGTACGCCACC 153149 || | ||| || ||||| |||| ||||| || || | ||| || ||||| || | Sbjct 764660 TCTATGGACTCATTATTTCCTAAAATTTGCGCAGTAGATGCTGTTGGCATAGGTGCAATT 764601 Query 153150 AACAAAGAATTCCGCAAGCCGTGCGCTCGAATGTCGTCCTTCAACGCCTGCCAATCCCAC 153209 ||||||||||| | | || || ||| | ||||| || || ||||||||| Sbjct 764600 AACAAAGAATTTCTAACTCCATGTTTAGCAATTTTTTCCTTTAAAGCAGCCCAATCCCAT 764541 Query 153210 AGCGCCGACGGTGTCGCGTTCCACATGTCGTACTGTAA 153247 | | | ||||| | |||||||| ||||| ||||| Sbjct 764540 AAATCAGTTGGTGTAACATTCCACATATCGTATTGTAA 764503 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496091400383520