Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Habropoda_20laboriosa_20[refseq_20GCF_5F001263275.1_202015-08-13] 27,566 sequences; 296,954,667 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq78 120 4e-22 >seq78 Length=1244926 Score = 120 bits (132), Expect = 4e-22 Identities = 171/241 (71%), Gaps = 0/241 (0%) Strand=Plus/Minus Query 154864 TGTCATGTATTATGATTACATACCCATCTACACATGGTGTATTTGAAACTAACATTAGAC 154923 |||| || | ||||| || || ||||| || |||| || |||||| | ||| | Sbjct 229761 TGTCTTGCTTGATGATAACTTATCCATCGACGAATGGCGTGTTTGAAGAGACGATTGGCG 229702 Query 154924 AGATATGTAAGATCGTTCATGACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAA 154983 | || ||| || |||||||| ||||||||| || ||||| ||||| || ||| | | Sbjct 229701 ATATTTGTTCTATGGTTCATGAAGCTGGTGGTCAAGTGTATCTGGATGGGGCTAATATGA 229642 Query 154984 ATGCACAGGTAGGACTAGCAAAACCATGTGAGTATGGTGCAGATGTATGTCATCTAAACT 155043 |||| || || ||| || || |||| ||||| ||||| | ||| | |||| Sbjct 229641 ATGCTCAAGTTGGATTATGTCGTCCTGGTGATTATGGCAGCGATGTCTCACATTTGAACT 229582 Query 155044 TACATAAAACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTG 155103 |||||||||| |||||||| || ||||| |||||||| ||||| | || || || || | Sbjct 229581 TACATAAAACGTTCTGTATACCTCATGGTGGTGGAGGACCTGGAATGGGACCCATTGGAG 229522 Query 155104 T 155104 | Sbjct 229521 T 229521 Score = 93.3 bits (102), Expect = 5e-14 Identities = 199/292 (68%), Gaps = 8/292 (3%) Strand=Plus/Minus Query 153741 GGATTTGATATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTCCTATGGGATATGGAGGT 153800 ||| ||||||| ||| |||| | || | ||||| | || | || ||||| || Sbjct 230969 GGAGTTGATATATGTGTCGGTACGAGTCAGCGTTTTGGAGTACCACTTGGGTATGGTGGA 230910 Query 153801 CCTCATGCTGCATTCTTTGCAACAACAGACAAGTATAAGA--GAAAGATACCTGGCAGAA 153858 |||||||||| ||||| ||| ||||| || || || ||| ||||| |||| Sbjct 230909 CCTCATGCTGGGTTCTTCGCATGTC--GACAAAAATTAGTACGATTGATGCCTGGTAGAA 230852 Query 153859 TTGTAGGTCAGTCAGTAGATAGT-GAA-GGTAATAAAGCATACAGATTAGCACTACAGAC 153916 | | ||| || | | | | | ||| ||| | | || || | || || || || || Sbjct 230851 TGATTGGT--GTTACCAAAGATTCGAATGGTCAGGATGCGTATCGTTTGGCTCTTCAAAC 230794 Query 153917 TAGAGAGCAGCATATCAGGAGAGACAAAGCAACCAGTAACATCTGCACAGCTCAGGCACT 153976 | || |||||||| ||||| |||||||| ||||| || ||||||||||| || ||| | Sbjct 230793 CCGCGAACAGCATATTAGGAGGGACAAAGCTACCAGCAATATCTGCACAGCACAAGCATT 230734 Query 153977 GCTGGCTAATATGTCTGGATTCTATGCAGCATATCATGGTGCAGATGGACTA 154028 |||| |||||||||| | || || | |||||||| | || ||| || Sbjct 230733 ATTGGCAAATATGTCTGCTATGTACGCCGTGTATCATGGATCCGAAGGAATA 230682 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579013217749440