Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Habropoda_20laboriosa_20[refseq_20GCF_5F001263275.1_202015-08-13]
27,566 sequences; 296,954,667 total letters
Query= NC_015284.1
Length=183806
Score E
Sequences producing significant alignments: (Bits) Value
seq78 114 2e-20
>seq78
Length=1244926
Score = 114 bits (126), Expect = 2e-20
Identities = 170/241 (71%), Gaps = 0/241 (0%)
Strand=Plus/Minus
Query 159539 TGTCATGTATTATGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATCAGAC 159598
|||| || | ||||| || |||||||| || |||| || |||||| | || |
Sbjct 229761 TGTCTTGCTTGATGATAACTTATCCATCGACGAATGGCGTGTTTGAAGAGACGATTGGCG 229702
Query 159599 AGATATGTAAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAA 159658
| || ||| || |||||||| ||||||||| || ||||| ||||| || ||| | |
Sbjct 229701 ATATTTGTTCTATGGTTCATGAAGCTGGTGGTCAAGTGTATCTGGATGGGGCTAATATGA 229642
Query 159659 ATGCACAGGTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAACT 159718
|||| || || || || || |||| ||||| ||||| | ||| | ||||
Sbjct 229641 ATGCTCAAGTTGGATTATGTCGTCCTGGTGATTATGGCAGCGATGTCTCACATTTGAACT 229582
Query 159719 TACATAAGACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTG 159778
||||||| || |||||||| || ||||| |||||||| ||||| | || || ||||| |
Sbjct 229581 TACATAAAACGTTCTGTATACCTCATGGTGGTGGAGGACCTGGAATGGGACCCATTGGAG 229522
Query 159779 T 159779
|
Sbjct 229521 T 229521
Score = 89.7 bits (98), Expect = 6e-13
Identities = 197/291 (68%), Gaps = 6/291 (2%)
Strand=Plus/Minus
Query 158416 GGATTTGACATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTCCTATGGGATACGGAGGT 158475
||| |||| || ||| |||| | || | ||||| | || | || || || ||
Sbjct 230969 GGAGTTGATATATGTGTCGGTACGAGTCAGCGTTTTGGAGTACCACTTGGGTATGGTGGA 230910
Query 158476 CCTCATGCTGCATTCTTTGCAACAACAGACAAGTATAAGA--GAAAGATACCTGGCAGAA 158533
|||||||||| ||||| ||| ||||| || || || ||| ||||| ||||
Sbjct 230909 CCTCATGCTGGGTTCTTCGCATGTC--GACAAAAATTAGTACGATTGATGCCTGGTAGAA 230852
Query 158534 TTGTAGGTCAGTCAGTAGATAGCGAA-GGTAATAAAGCATACAGATTAGCACTACAGACT 158592
| | ||| | |||| |||| ||| | | || || | || || || || ||
Sbjct 230851 TGATTGGTGTTACCAAAGATT-CGAATGGTCAGGATGCGTATCGTTTGGCTCTTCAAACC 230793
Query 158593 AGAGAGCAGCATATCAGAAGAGACAAAGCAACCAGTAACATCTGCACAGCACAAGCACTG 158652
| || |||||||| || || |||||||| ||||| || |||||||||||||||||| |
Sbjct 230792 CGCGAACAGCATATTAGGAGGGACAAAGCTACCAGCAATATCTGCACAGCACAAGCATTA 230733
Query 158653 CTGGCTAATATGTCTGGGTTCTATGCAGCATATCATGGTGCAGATGGACTA 158703
|||| |||||||||| | || || | |||||||| | || ||| ||
Sbjct 230732 TTGGCAAATATGTCTGCTATGTACGCCGTGTATCATGGATCCGAAGGAATA 230682
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 587848572257760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |