Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Habropoda_20laboriosa_20[refseq_20GCF_5F001263275.1_202015-08-13] 27,566 sequences; 296,954,667 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq78 114 2e-20 >seq78 Length=1244926 Score = 114 bits (126), Expect = 2e-20 Identities = 170/241 (71%), Gaps = 0/241 (0%) Strand=Plus/Minus Query 159539 TGTCATGTATTATGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATCAGAC 159598 |||| || | ||||| || |||||||| || |||| || |||||| | || | Sbjct 229761 TGTCTTGCTTGATGATAACTTATCCATCGACGAATGGCGTGTTTGAAGAGACGATTGGCG 229702 Query 159599 AGATATGTAAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAA 159658 | || ||| || |||||||| ||||||||| || ||||| ||||| || ||| | | Sbjct 229701 ATATTTGTTCTATGGTTCATGAAGCTGGTGGTCAAGTGTATCTGGATGGGGCTAATATGA 229642 Query 159659 ATGCACAGGTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAACT 159718 |||| || || || || || |||| ||||| ||||| | ||| | |||| Sbjct 229641 ATGCTCAAGTTGGATTATGTCGTCCTGGTGATTATGGCAGCGATGTCTCACATTTGAACT 229582 Query 159719 TACATAAGACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTG 159778 ||||||| || |||||||| || ||||| |||||||| ||||| | || || ||||| | Sbjct 229581 TACATAAAACGTTCTGTATACCTCATGGTGGTGGAGGACCTGGAATGGGACCCATTGGAG 229522 Query 159779 T 159779 | Sbjct 229521 T 229521 Score = 89.7 bits (98), Expect = 6e-13 Identities = 197/291 (68%), Gaps = 6/291 (2%) Strand=Plus/Minus Query 158416 GGATTTGACATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTCCTATGGGATACGGAGGT 158475 ||| |||| || ||| |||| | || | ||||| | || | || || || || Sbjct 230969 GGAGTTGATATATGTGTCGGTACGAGTCAGCGTTTTGGAGTACCACTTGGGTATGGTGGA 230910 Query 158476 CCTCATGCTGCATTCTTTGCAACAACAGACAAGTATAAGA--GAAAGATACCTGGCAGAA 158533 |||||||||| ||||| ||| ||||| || || || ||| ||||| |||| Sbjct 230909 CCTCATGCTGGGTTCTTCGCATGTC--GACAAAAATTAGTACGATTGATGCCTGGTAGAA 230852 Query 158534 TTGTAGGTCAGTCAGTAGATAGCGAA-GGTAATAAAGCATACAGATTAGCACTACAGACT 158592 | | ||| | |||| |||| ||| | | || || | || || || || || Sbjct 230851 TGATTGGTGTTACCAAAGATT-CGAATGGTCAGGATGCGTATCGTTTGGCTCTTCAAACC 230793 Query 158593 AGAGAGCAGCATATCAGAAGAGACAAAGCAACCAGTAACATCTGCACAGCACAAGCACTG 158652 | || |||||||| || || |||||||| ||||| || |||||||||||||||||| | Sbjct 230792 CGCGAACAGCATATTAGGAGGGACAAAGCTACCAGCAATATCTGCACAGCACAAGCATTA 230733 Query 158653 CTGGCTAATATGTCTGGGTTCTATGCAGCATATCATGGTGCAGATGGACTA 158703 |||| |||||||||| | || || | |||||||| | || ||| || Sbjct 230732 TTGGCAAATATGTCTGCTATGTACGCCGTGTATCATGGATCCGAAGGAATA 230682 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 587848572257760