Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Habropoda_20laboriosa_20[refseq_20GCF_5F001263275.1_202015-08-13] 27,566 sequences; 296,954,667 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq59 163 3e-35 seq284 147 2e-30 >seq59 Length=4191719 Score = 163 bits (180), Expect = 3e-35 Identities = 176/233 (76%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 47232 TGAATAGATCCTCCgttttctataattttgttttttaattcatttgaccaaagttttcgt 47291 |||||||| || ||| ||||||||| ||||| | || | |||||| | || | Sbjct 764807 TGAATAGAACCGTTATTTGCTATAATTTCATTTTTCATGTCCTGATCCCAAAGATCTCTT 764748 Query 47292 tcagttaatgtttttaaAAGATGAGGATTAACAATTTGAAATTCTCCAGATAGTACTCTA 47351 ||||| | ||| | |||||||||||||| |||||| |||||||| | ||||| Sbjct 764747 TCAGTAAGATCCCGTAACAAATGAGGATTAACAACTTGAAACTCTCCAGACAAAACTCTT 764688 Query 47352 CGGCTATATATATTACTTGTATATGGTTCTATAGATTCATTATTTCCAAAAATTTGAGCA 47411 | |||| |||||| | ||||| |||||||| || ||||||||||| |||||||| ||| Sbjct 764687 CTTGTATAAATATTATTAGTATAGGGTTCTATGGACTCATTATTTCCTAAAATTTGCGCA 764628 Query 47412 GTTGATGCTGTAGGCATGGATGCAACTAATAAGCTATTTCTTACTCCATATTT 47464 || |||||||| ||||| | ||||| ||| || |||||| ||||||| ||| Sbjct 764627 GTAGATGCTGTTGGCATAGGTGCAATTAACAAAGAATTTCTAACTCCATGTTT 764575 Score = 159 bits (176), Expect = 4e-34 Identities = 222/311 (71%), Gaps = 0/311 (0%) Strand=Plus/Minus Query 48270 TTGCCACTATTCCTTTTAAGTTCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAA 48329 || ||| |||| ||||||| || | ||| || | || || |||||||||||||||||| Sbjct 763288 TTACCAGTATTTTTTTTAAGGTCCAAAAATTCAAAAATGTCTGCATGCCATGGTTCTAAA 763229 Query 48330 TATATTGCCATTACACCTGGTCGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTG 48389 |||| || | | | ||||||| |||||| ||||||||||| | ||||| |||||||| Sbjct 763228 TATAGGGCAAATGCTCCTGGTCTTTTATTCCCTCCTTGATCAACATATCGAGCAGTATTA 763169 Query 48390 TTATAAACTCTTAACATTGGGACAATACCATTTGATATACCATTGGTTCCCGAAATATAA 48449 ||||| ||||| | |||||| || | |||||| |||| |||| || || || Sbjct 763168 TTATATACTCTAATCATTGGAACTAAACCATTAGATACACCAAATGTACCACCTATTGGT 763109 Query 48450 CTTCCACTAGCTCTTATATTACTAATTGAAATACCTATACCACCTGCCATTTTAGATATT 48509 | || | |||| ||| | || || || |||||||| || ||| ||| Sbjct 763108 GTACCTTTTGCTCGAATACAATGTATGTTAAGTCCAATACCACCAGCAGATTTGCTAATT 763049 Query 48510 AGAGCACACCGTTTAAGGGTATCATAAATTCCTTCTATACTATCATCTATCATATTTAAT 48569 || ||||| | || | ||||||||||||||||| || ||||| |||| ||| | Sbjct 763048 AGTGCACATCTCTTTAATGTATCATAAATTCCTTCAATGCTATCTGAACTCATTGTTAGT 762989 Query 48570 AGAAAACAACT 48580 ||||||||||| Sbjct 762988 AGAAAACAACT 762978 Score = 107 bits (118), Expect = 2e-18 Identities = 191/277 (69%), Gaps = 4/277 (1%) Strand=Plus/Minus Query 48563 ATTTAATAGAAAACAACTAGACATTTGCGGATGACAAGTTCCTGAATTAAATAATGTTGG 48622 |||| | | || | | |||||||||||| | || ||| | || | ||| | ||||| Sbjct 762911 ATTTCAGAAAATATACCTAGACATTTGCTGTTGCTTAGTACATGCAGCAAAAAGAGTTGG 762852 Query 48623 AGATGCATGAATAAACCATTTCTCTGATAACAATTTATATGTTTCAATAACAGAATCTAT 48682 || ||||| |||| | |||||||| || ||||||||||| ||| | || || Sbjct 762851 TGAAGCATGTGTAAAATAACGTTCTGATAAGAAATTATATGTTTCTATAGCTCTGTCAAT 762792 Query 48683 ATCCCATTGATGTATACCTATAGATACACGCATTAACATATATTGAGGTCTTTCAACAAT 48742 ||| ||| ||| | | | || | ||||||||| | || || || ||||||| Sbjct 762791 ATCATCACCATGGATAGCAACTGCAACTCTCATTAACATGTGCTGTGGCCTCTCAACAAC 762732 Query 48743 TTTGTTATTTATTTTCAAAAGATATGATTTTTCCAATGTTTTAAAACCAAAATAGTTGTA 48802 ||| || ||| || || | ||| | |||| | |||||| ||||||||||| ||||| Sbjct 762731 TTTTCCATATATCTTTAATAAATAGCTTCTTTCAAGTGTTTTGAAACCAAAATAATTGTA 762672 Query 48803 --TGAAAAGTCGTTATCATTAATAATTGATGAATTTA 48837 ||||| || |||||| ||| |||| ||||||| Sbjct 762671 ACTGAAA--TCTCTATCATAAATTATTGCAGAATTTA 762637 Score = 87.8 bits (96), Expect = 2e-12 Identities = 130/189 (69%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 47540 TCCTTTACTTATCGGAGAACCATTATATGTTTTATAAGGACCGTATAGTTTAGCGAGTTC 47599 |||||| || | ||| ||| ||||| |||| || ||||| | || ||| | ||| Sbjct 764429 TCCTTTGCTAACTGGACTACCTTTATACGTTTCGTATGGACCTTTCTCTTCAGCAATTTC 764370 Query 47600 ACAACTTGCTTCCAATGCACTATAATATATTGTTTCAAATATTTTTATGTTTAGATTCCT 47659 |||||| ||||| || ||||||||||||| ||||||||||||| || || || || Sbjct 764369 ACAACTGGCTTCTAAAGCACTATAATATAGCGTTTCAAATATTTGGATATTAAGTATCTG 764310 Query 47660 TGCTTCTGATGATTCAAAAGGATANNNNNNNNNNNNNAATGTATCTGCCAATCCTTGAAC 47719 ||||| | |||||| ||||| || | |||||| | ||||||| Sbjct 764309 TGCTTTTTCACTTTCAAACGGATATCGCATTAAGAGGAAAGCATCTGCGAGACCTTGAAT 764250 Query 47720 ACCAATACC 47728 |||||||| Sbjct 764249 TCCAATACC 764241 Score = 86.0 bits (94), Expect = 7e-12 Identities = 113/154 (73%), Gaps = 6/154 (4%) Strand=Plus/Minus Query 48916 CACTAAATAttttttttGTTTCTTTATGAAGATTAGATATAGATATTCTAGCAGCTAATA 48975 ||||||| |||| || |||||||| |||||||| || || | ||||| || ||||||| Sbjct 762440 CACTAAAGGTTTTCTTCGTTTCTTTGTGAAGATTGGAGATTGCAATTCTTGCTGCTAATA 762381 Query 48976 TAGCATAATCTGGATGAATTGTTGTACATGTACTAGAT---ATTTCTGCTGCTAATATAT 49032 ||||||||||||||| | || || || |||| | | |||| ||||| | ||| Sbjct 762380 CAGCATAATCTGGATGTTTGGTAGT-CA--TACTTGCTGCAGTTTCAGCTGCAAGATTAT 762324 Query 49033 CTAATTCTTTAGTAGTTACACCTGTATATATTCC 49066 |||| || || || ||||||| ||||| || Sbjct 762323 CTAACTCAACTGTGGTAACACCTGAGTATATACC 762290 >seq284 Length=1419496 Score = 147 bits (162), Expect = 2e-30 Identities = 165/218 (76%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 19224 ATCTTTAACATATGCATCTATCAATAAACTGTACATTTCTGAATGAATATTTTCTATAGC 19283 |||| || ||||| ||| || || ||| |||||||||||| || | |||||| || || Sbjct 890242 ATCTGCAATATATGTATCGATTAACAAAGAGTACATTTCTGAGTGCACATTTTCCATTGC 890183 Query 19284 CATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGTACTTCACTACAAAATCTTTC 19343 | ||||| || ||||| || | ||| |||||||| || || || | ||||| ||| Sbjct 890182 AACTTGAAAGCCATAAAAGCAACGTGCCTCTGTTATTTGCACCTCCTGGCTAAATCGTTC 890123 Query 19344 GACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAAAATGCTAATACATGTTTAAT 19403 || | ||||||||| || ||||||||| ||| ||||||||||||||||||||| || Sbjct 890122 AACAAGATTTTCATTGACAATTCCATCAGAAGCAGCAAAAAATGCTAATACATGTGATAT 890063 Query 19404 AAAATGTTTTTCATCTGA-GGTTAATGTATTCCAATCA 19440 ||| | ||| ||| |||| ||||| | ||||| ||| Sbjct 890062 AAATTTTTTCTCA-CTGATAGTTAAACTGTTCCAGTCA 890026 Score = 113 bits (124), Expect = 5e-20 Identities = 162/225 (72%), Gaps = 10/225 (4%) Strand=Plus/Minus Query 18766 tttttGAATCCTAATTCTAATAGTAGTCTATCCGCTACAAATTTAATATATGTGTTCATC 18825 |||| | | |||||||||| || | ||| ||||| ||||||| ||||||| | ||| Sbjct 890878 TTTTGGCAACCTAATTCTACAAGCAATCTGTCCGCAACAAATTCAATATATTGGCACATG 890819 Query 18826 ATATCACAATTCATTCCTATTAATTTAACAGGTAGTGCATCTGTAAGAAATTCTTGTTCT 18885 | | ||| ||||| ||||| | || ||| |||| || || || | |||||||||||| Sbjct 890818 AGTTTACAGTTCATGCCTATCATTTCAACGGGTAAAGCGTCAGTTAAAAATTCTTGTTCA 890759 Query 18886 ATATTTACTGCCTCTGATATAATAGATACAACTCTATCTTCATTAGGAGG-----GTATA 18940 || | || || ||| ||||| ||| || | |||||| | ||| |||| Sbjct 890758 ATTTGGACCGCGTCTTTAATAATTGATGTGACGC---GTTCATTCGAAGGTTTCTGTAT- 890703 Query 18941 GAAGATGTTTAAACATCAAACATGCAAAATCACAATGTAGTCCCT 18985 || | ||||||||||| || ||||||||||| ||||| | ||||| Sbjct 890702 GATG-TGTTTAAACATTAAGCATGCAAAATCGCAATGCAATCCCT 890659 Score = 104 bits (114), Expect = 3e-17 Identities = 98/125 (78%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 19450 TTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTTTATACATGTTC 19509 ||||| | |||||||| || ||||||||||| || || ||||||||||| ||||| | | Sbjct 889928 TTAGAAAGGTCTACTTCCTCCACTGTCCAAAAGGAGGCTTCTGCTTTTTTGTACATTTGC 889869 Query 19510 CATATATCACGATATTGTATAGGAAATATAACAAATCTATTTTTATTTTCTTTAAGAATA 19569 || || ||| | |||| |||||||| | |||||||||| | ||||||||| || | Sbjct 889868 CAAATGTCAGGCCATTGGATAGGAAAAACAACAAATCTACGTGGATTTTCTTTTAGCAGT 889809 Query 19570 GGTTC 19574 ||||| Sbjct 889808 GGTTC 889804 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 561915111360240