Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Habropoda_20laboriosa_20[refseq_20GCF_5F001263275.1_202015-08-13] 27,566 sequences; 296,954,667 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq284 91.5 2e-13 >seq284 Length=1419496 Score = 91.5 bits (100), Expect = 2e-13 Identities = 76/93 (82%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 36872 CATAACTCCCATTTTTTGATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCCTTC 36931 ||| |||||| ||||||||||||||||||| | | |||||||| || ||||| ||||| Sbjct 891059 CATCACTCCCCATTTTTGATATTCTCCAACTTTTTTCTCGAAAAAGTTCGTCTTACCTTC 891000 Query 36932 TAGTGATATATTTTCCATAAAATCAAATGGATT 36964 | || |||| |||||| ||||| |||||||| Sbjct 890999 CAAAGAAATATGTTCCATGAAATCGAATGGATT 890967 Score = 87.8 bits (96), Expect = 2e-12 Identities = 163/233 (70%), Gaps = 5/233 (2%) Strand=Plus/Minus Query 37195 AACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACCTCttt 37254 ||||| |||||||| || | ||||||| || || | |||||||| | ||||| | Sbjct 890560 AACCT-CATCTCTAGAAATGAGTTCATTACTGAATGTAAGGCCTGGCATAAGTCCTCTCT 890502 Query 37255 ttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAA 37314 | || | |||||| || || |||||| ||| ||||||||||||||| ||||| |||| Sbjct 890501 TCTTTAACCAAAAAATGGCAGCAAAACTACCACTAAAGAAAATACCTTCCACTGCAGCAA 890442 Query 37315 ATGCTACAAGACGTGTACCGAAA-GTTGAACTATAATCAGAAATCCAtttttttGTCCAA 37373 |||| | | |||| | |||| || | | | | || | ||||| ||| || |||| Sbjct 890441 ATGCAATTACACGT-TCGGGAAAGGTAGCAGTTTCATGATTTATCCAATTTAATGCCCAA 890383 Query 37374 TCTGCCTTTAATTTAACACA-TTCAATTGTTTCAATTGCTTTTAAGAGAAAGT 37425 | || ||| |||||| ||| | ||||||| || || || | ||||| Sbjct 890382 TTAGCTTTTCTCGCAACACACGGCAAAT-TTTCAATCGCATTAAATAAAAAGT 890331 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592112702438640