Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Habropoda_20laboriosa_20[refseq_20GCF_5F001263275.1_202015-08-13]
27,566 sequences; 296,954,667 total letters
Query= NC_016924.1
Length=185139
Score E
Sequences producing significant alignments: (Bits) Value
seq284 91.5 2e-13
>seq284
Length=1419496
Score = 91.5 bits (100), Expect = 2e-13
Identities = 76/93 (82%), Gaps = 0/93 (0%)
Strand=Plus/Minus
Query 36872 CATAACTCCCATTTTTTGATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCCTTC 36931
||| |||||| ||||||||||||||||||| | | |||||||| || ||||| |||||
Sbjct 891059 CATCACTCCCCATTTTTGATATTCTCCAACTTTTTTCTCGAAAAAGTTCGTCTTACCTTC 891000
Query 36932 TAGTGATATATTTTCCATAAAATCAAATGGATT 36964
| || |||| |||||| ||||| ||||||||
Sbjct 890999 CAAAGAAATATGTTCCATGAAATCGAATGGATT 890967
Score = 87.8 bits (96), Expect = 2e-12
Identities = 163/233 (70%), Gaps = 5/233 (2%)
Strand=Plus/Minus
Query 37195 AACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACCTCttt 37254
||||| |||||||| || | ||||||| || || | |||||||| | ||||| |
Sbjct 890560 AACCT-CATCTCTAGAAATGAGTTCATTACTGAATGTAAGGCCTGGCATAAGTCCTCTCT 890502
Query 37255 ttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAA 37314
| || | |||||| || || |||||| ||| ||||||||||||||| ||||| ||||
Sbjct 890501 TCTTTAACCAAAAAATGGCAGCAAAACTACCACTAAAGAAAATACCTTCCACTGCAGCAA 890442
Query 37315 ATGCTACAAGACGTGTACCGAAA-GTTGAACTATAATCAGAAATCCAtttttttGTCCAA 37373
|||| | | |||| | |||| || | | | | || | ||||| ||| || ||||
Sbjct 890441 ATGCAATTACACGT-TCGGGAAAGGTAGCAGTTTCATGATTTATCCAATTTAATGCCCAA 890383
Query 37374 TCTGCCTTTAATTTAACACA-TTCAATTGTTTCAATTGCTTTTAAGAGAAAGT 37425
| || ||| |||||| ||| | ||||||| || || || | |||||
Sbjct 890382 TTAGCTTTTCTCGCAACACACGGCAAAT-TTTCAATCGCATTAAATAAAAAGT 890331
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 592112702438640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |