Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Habropoda_20laboriosa_20[refseq_20GCF_5F001263275.1_202015-08-13]
27,566 sequences; 296,954,667 total letters
Query= NC_019945.1
Length=132978
Score E
Sequences producing significant alignments: (Bits) Value
seq49 104 2e-17
seq65 102 7e-17
seq394 100 2e-16
seq68 100 2e-16
>seq49
Length=1886280
Score = 104 bits (114), Expect = 2e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613
||||| || ||||| || ||||| || || ||||| || ||| ||| ||| | ||
Sbjct 1163141 ATGCAGATCTTTGTCAAGACATTGACTGGCAAAACAATAACCCTCGAGGTTGAAGCATCC 1163082
Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673
|| || | | || | ||| |||||| ||||| |||||| | ||| ||||||
Sbjct 1163081 GATACAATTGAAAATGTGAAGGCAAAAATTCAGGACAAGGAGGGAATTCCCCCAGATCAG 1163022
Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733
|| ||| | || ||||| ||||||||| | |||||| | ||| | | ||||| |||
Sbjct 1163021 CAAAGATTGATTTTTGCTGGCAAACAACTTGAAGATGGAAGAACACTCTCTGATTACAAC 1162962
Query 28734 ATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783
||||||||||| || || || ||| | ||| | |||| |||| || ||
Sbjct 1162961 ATTCAAAAAGAGTCAACACTTCACCTTGTACTTCGATTGAGAGGTGGAAT 1162912
>seq65
Length=771584
Score = 102 bits (112), Expect = 7e-17
Identities = 161/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612
|||||| || ||||| |||||| | ||||| |||||||| ||| ||| || ||||
Sbjct 538265 AATGCAGATCTTTGTCAAAACACTCACGGGGAAAACCATCACCCTGGAAGTTGAGGCTTC 538324
Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672
||| || | | | | ||| || || |||||||||||| | || || ||
Sbjct 538325 AGACACAATAGATAACGTTAAGGCTAAGATTCAAGACAAAGAGGGAATCCCTCCCGACCA 538384
Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732
||| | | || ||||| |||||||| ||||||||| ||| | | ||||| ||
Sbjct 538385 GCAGCGTTTGATATTTGCTGGCAAACAGTTGGAAGATGGGCGCACTCTTTCAGATTACAA 538444
Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783
||| |||||||| || || |||||| |||| || || | |||||||| ||
Sbjct 538445 CATCCAAAAAGAGTCCACACTGCACTTGGTGTTGCGACTCCGAGGAGGAAT 538495
Score = 98.7 bits (108), Expect = 8e-16
Identities = 162/234 (69%), Gaps = 0/234 (0%)
Strand=Plus/Plus
Query 28550 AAAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACC 28609
||| ||||| || || || ||||| | || ||||||||||| ||| || ||| |
Sbjct 536210 AAATATGCAGATCTTCGTCAAAACCCTCACAGGTAAAACCATCACCTTGGAGGTAGAAGC 536269
Query 28610 TTCAGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGA 28669
||||| || | | || | ||| || ||| |||||||| ||| | || ||
Sbjct 536270 CTCAGACACAATAGAGAATGTGAAGGCCAAGATCCAAGACAAAGAAGGAATCCCTCCCGA 536329
Query 28670 TCAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTA 28729
|| ||| | | |||||||| || ||||| ||||||||| | ||| | | |||||
Sbjct 536330 CCAGCAGCGTTTGATCTTTGCTGGGAAACAGTTGGAAGATGGTCGCACTCTTTCAGATTA 536389
Query 28730 TAACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783
|| || |||||||| || || |||||| ||||||| || | |||||||| ||
Sbjct 536390 CAATATCCAAAAAGAGTCCACACTGCACTTGGTATTGCGACTCCGAGGAGGAAT 536443
Score = 96.9 bits (106), Expect = 3e-15
Identities = 160/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612
|||||| || || || ||||| | | || |||||||| ||| || || ||||
Sbjct 538037 AATGCAGATCTTCGTCAAAACGCTCAATGGGAAAACCATCACCCTGGACGTTGAGGCTTC 538096
Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672
||| || || | | || ||| || |||| |||||||| ||| | || |||
Sbjct 538097 AGACACAGTAGAGAACCTTAAGGCCAAGATCGTAGACAAAGAAGGAATCCCTTCTGATAT 538156
Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732
||| | | |||||||| || ||||| ||||||||| | ||| | | ||||||||
Sbjct 538157 GCAGCGTTTGATCTTTGCTGGGAAACAGTTGGAAGATGGTCGCACTCTTTCAGATTATAA 538216
Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783
||| |||||||| ||||| |||||| | || || || | |||||||| ||
Sbjct 538217 CATCCAAAAAGAGTCTACACTGCACTTAGTGTTGCGACTCCGAGGAGGAAT 538267
Score = 82.4 bits (90), Expect = 6e-11
Identities = 159/233 (68%), Gaps = 4/233 (2%)
Strand=Plus/Plus
Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612
|||||| || || || || || | || || |||||||| || |||| || ||||
Sbjct 536669 AATGCAGATCTTCGTCAAGACGCTCACAGGGAAAACCATCACACTCGAAGTTGAGGCTTC 536728
Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672
||| || | | | | ||| || || |||||||| ||| | || || ||
Sbjct 536729 AGACACAATAGAAAACGTTAAGGCCAAGATTCAAGACAAAGAAGGAATCCCTCCCGACCA 536788
Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGAT--TCTAAAACTATGGCCGATTAT 28730
||| | | |||||||| |||||||||||||||||| | | ||| | | |||||
Sbjct 536789 GCAGCGTTTGATCTTTGCTGGCAAACAATTGGAAGATGGGCGCACACTTT--CAGATTAC 536846
Query 28731 AACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783
|| || |||||||| || || |||||| |||| || || | |||||||| ||
Sbjct 536847 AATATCCAAAAAGAGTCCACACTGCACTTGGTGTTGCGACTCCGAGGAGGAAT 536899
>seq394
Length=4544675
Score = 100 bits (110), Expect = 2e-16
Identities = 90/113 (80%), Gaps = 0/113 (0%)
Strand=Plus/Plus
Query 28668 GATCAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGAT 28727
||||| |||||| | |||||||| ||||||||||| |||||| || |||| | | |||
Sbjct 4399695 GATCAGCAGAGATTAATCTTTGCTGGCAAACAATTAGAAGATGGTAGAACTTTATCAGAT 4399754
Query 28728 TATAACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGG 28780
||||||||||| || |||||||| | || |||||||| | ||| |||| ||
Sbjct 4399755 TATAACATTCAGAAGGAATCTACATTACATTTGGTATTACGTTTAAGAGGTGG 4399807
>seq68
Length=1848670
Score = 100 bits (110), Expect = 2e-16
Identities = 140/194 (72%), Gaps = 2/194 (1%)
Strand=Plus/Minus
Query 28551 AAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCT 28610
|||||||| ||||| || ||||| || |||||||||||||||||| ||| |||| |
Sbjct 813114 AAAATGCAGATATTCGTGAAAACTTTGACGGGTAAAACCATTACCCTTGAAGTGGAAGCA 813055
Query 28611 TCAGAGACGGTGGCCGATCTCAA-GCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGA 28669
|| || || | | || | || ||||||| || || ||||| ||| | || ||
Sbjct 813054 TCGGATACTATTGAAAATGTGAAAGCAAAAATTCAG-GATAAAGAAGGAATTCCACCCGA 812996
Query 28670 TCAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTA 28729
||| || | || || ||||| || ||||| || |||||| ||| || | |||||
Sbjct 812995 TCAGCAACGTCTCATTTTTGCTGGAAAACAGTTAGAAGATGGACGTACTCTGTCAGATTA 812936
Query 28730 TAACATTCAAAAAG 28743
||||||||||||||
Sbjct 812935 TAACATTCAAAAAG 812922
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 425261880737514
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |