Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Habropoda_20laboriosa_20[refseq_20GCF_5F001263275.1_202015-08-13] 27,566 sequences; 296,954,667 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq206 95.1 2e-14 >seq206 Length=1639385 Score = 95.1 bits (104), Expect = 2e-14 Identities = 165/236 (70%), Gaps = 12/236 (5%) Strand=Plus/Plus Query 47843 CCTCGACATAATCTCTGGCATGTCCCCAGTCACGAAGTGCATCAAGATTTCCTAGAT-AT 47901 |||| ||||||||||| ||||||||||| ||||| ||||| | |||||||| | | Sbjct 34478 CCTCAACATAATCTCTTGCATGTCCCCAATCACGTTTAGCATCTAAATTTCCTAATTCAA 34537 Query 47902 AAACAGTCTTGCTTACCTTCAGAGATTG---CTTT--TAATGCTCTTGTAATCTTACGAG 47956 |||| ||||| |||| |||| |||| || | |||||| | ||| | | Sbjct 34538 GAACA-TCTTGTAAACCT-----AATTGTATCTTTGCTATAGATCTTGTTACCTTTCTGG 34591 Query 47957 TTACAAAAGTTTCACCACGTCTTGGAGATTCATGATTAAAAAGAATACCACTACAGGCAT 48016 | |||||| |||| || | | ||| ||||||||| || | |||||| |||| ||| Sbjct 34592 TAACAAAATTTTCTCCTCTACGAGGACTTTCATGATTGAACAATATACCATTACATGCAA 34651 Query 48017 ACATTCCGTATGATTCACGATAGTTCTTTACTATCCAGTACCCATAGAGTTTTGCA 48072 |||| |||| ||| | |||||| |||||||| | | ||| | ||||||| Sbjct 34652 ACATATTATATGCTTCCCTATAGTTTACCACTATCCAAAAACTATATAATTTTGCA 34707 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665265087267120