Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Habropoda_20laboriosa_20[refseq_20GCF_5F001263275.1_202015-08-13]
27,566 sequences; 296,954,667 total letters
Query= NC_021247.1
Length=228750
Score E
Sequences producing significant alignments: (Bits) Value
seq49 140 5e-28
seq68 118 2e-21
seq284 96.9 5e-15
>seq49
Length=1886280
Score = 140 bits (154), Expect = 5e-28
Identities = 156/206 (76%), Gaps = 2/206 (1%)
Strand=Plus/Minus
Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881
||||||||| || | ||||| | ||||||||||||||||| |||||||| |||| |||
Sbjct 1161556 AATGCAAATTTTCGTCAAAACCCTTACTGGAAAAACTATTACTTTAGAAGTTGAAGCTTC 1161497
Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941
||||| ||| || ||||| ||||| || || || || ||||| || ||||| ||
Sbjct 1161496 TGATACGATTGAGAATGTGAAGGCAAAAATTCAGGACAAGGAGGGCATTCCACCAGACCA 1161437
Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001
|||||||||||||| || |||||||| || |||||| | || | || || |||||
Sbjct 1161436 ACAAAGATTGATTTTCGCTGGTAAGCAACTTGAAGATGGACGCACACTTTCGGACTATAA 1161377
Query 156002 TATATCCAAA-GAGGCGACGCTTCAT 156026
|| || ||| ||| | || ||||||
Sbjct 1161376 CAT-TCAAAAGGAGTCAACTCTTCAT 1161352
Score = 134 bits (148), Expect = 2e-26
Identities = 155/206 (75%), Gaps = 2/206 (1%)
Strand=Plus/Minus
Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881
||||||||| || | ||||| | ||||||||||||||||| |||||||| |||| |||
Sbjct 1161328 AATGCAAATTTTCGTCAAAACCCTTACTGGAAAAACTATTACTTTAGAAGTTGAAGCTTC 1161269
Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941
||||| ||| || ||||| ||||| || || || || ||||| || ||||| ||
Sbjct 1161268 TGATACGATTGAGAATGTGAAGGCAAAAATTCAGGACAAGGAGGGCATTCCCCCAGATCA 1161209
Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001
||||||||||||| || |||||||| || |||||| | || | || || |||||
Sbjct 1161208 GCAAAGATTGATTTTCGCTGGTAAGCAACTTGAAGATGGACGCACACTTTCTGACTATAA 1161149
Query 156002 TATATCCAAA-GAGGCGACGCTTCAT 156026
||| || ||| ||| | || || |||
Sbjct 1161148 TAT-TCAAAAGGAGTCAACTCTCCAT 1161124
Score = 131 bits (144), Expect = 2e-25
Identities = 173/239 (72%), Gaps = 2/239 (1%)
Strand=Plus/Minus
Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881
||||||||| || | ||||| | |||||||| || || || |||||||| |||| |||
Sbjct 1161100 AATGCAAATTTTCGTCAAAACCCTTACTGGAAAGACGATCACTTTAGAAGTTGAAGCTTC 1161041
Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941
|||| ||| ||| || ||| ||||| |||||||| || ||||| || ||||| ||
Sbjct 1161040 AGATACCATTGAAAATGTTAAAGCAAAAATCCAAGATAAGGAGGGCATTCCCCCAGATCA 1160981
Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001
||||||||||||| || ||||||||||| ||||| | || | |||| |||||
Sbjct 1160980 GCAAAGATTGATTTTCGCTGGTAAGCAGCTTGAAGACGGACGCACACTTGCAGACTATAA 1160921
Query 156002 TATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGG--TGTAAAATT 156058
||| || || | || || ||| | || | |||| ||||| || |||||| ||
Sbjct 1160920 TATTCAGAAGGAATCAACTCTCCATCTTGTACTTCGATTGAGAGGTGGAATGTAAATTT 1160862
Score = 123 bits (136), Expect = 4e-23
Identities = 152/205 (74%), Gaps = 2/205 (1%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| || | || || | || |||||||||||||| |||||||| || | |||
Sbjct 1162001 ATGCAAATTTTCGTCAAGACCCTTACCGGAAAAACTATTACTTTAGAAGTTGAGGCTTCA 1161942
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|||| ||| ||| || || ||||| |||||||| || || || || ||||| |||
Sbjct 1161941 GATACCATTGAAAATGTAAAGGCAAAAATCCAAGATAAGGAGGGTATTCCACCAGACCAA 1161882
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
||||||||||||| || |||||||| || |||||| | || | || || ||||||
Sbjct 1161881 CAAAGATTGATTTTCGCTGGTAAGCAACTTGAAGATGGACGCACACTTTCTGACTATAAT 1161822
Query 156003 ATATCCAAA-GAGGCGACGCTTCAT 156026
|| || ||| ||| | || || |||
Sbjct 1161821 AT-TCAAAAGGAGTCAACTCTCCAT 1161798
Score = 120 bits (132), Expect = 4e-22
Identities = 120/156 (77%), Gaps = 0/156 (0%)
Strand=Plus/Minus
Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881
||||||||| || | ||||| | || |||||||||||||| |||||||| |||| |||
Sbjct 1162458 AATGCAAATTTTCGTCAAAACCCTTACGGGAAAAACTATTACTTTAGAAGTTGAAGCTTC 1162399
Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941
||||| ||| || ||||| ||||| || || || ||||| || || || || ||
Sbjct 1162398 TGATACGATTGAGAATGTGAAGGCAAAAATTCAGGACAAGGAAGGTATTCCACCTGATCA 1162339
Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGA 155977
||| |||||||||| || || |||||||| |||||
Sbjct 1162338 ACAGAGATTGATTTTCGCTGGAAAGCAGCTTGAAGA 1162303
Score = 114 bits (126), Expect = 2e-20
Identities = 119/156 (76%), Gaps = 0/156 (0%)
Strand=Plus/Minus
Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881
||||||||| || ||||||| | || ||||| || || || |||||||| |||| |||
Sbjct 1162230 AATGCAAATTTTCGTTAAAACTCTCACGGGAAAGACAATCACTTTAGAAGTTGAAGCTTC 1162171
Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941
||||| ||| || ||||| ||||| || || || ||||| || || || || ||
Sbjct 1162170 TGATACAATTGAGAATGTGAAGGCAAAAATTCAGGACAAGGAAGGTATTCCACCTGATCA 1162111
Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGA 155977
||| |||||||||| || ||||||||||| |||||
Sbjct 1162110 ACAGAGATTGATTTTCGCTGGTAAGCAGCTTGAAGA 1162075
Score = 113 bits (124), Expect = 7e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
||||| || ||| | || ||||||||||| ||||| || || | || || |||| ||
Sbjct 1163141 ATGCAGATCTTTGTCAAGACATTGACTGGCAAAACAATAACCCTCGAGGTTGAAGCATCC 1163082
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|||| ||| ||| ||||| ||||| || || || || || || || ||||| ||
Sbjct 1163081 GATACAATTGAAAATGTGAAGGCAAAAATTCAGGACAAGGAGGGAATTCCCCCAGATCAG 1163022
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
||||||||||||| ||| || || || || |||||| ||||| | || ||||| ||
Sbjct 1163021 CAAAGATTGATTTTTGCTGGCAAACAACTTGAAGATGGAAGAACACTCTCTGATTACAAC 1162962
Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGG 156049
|| |||||| | || ||||| | || | |||| ||||| ||
Sbjct 1162961 ATTCAAAAAGAGTCAACACTTCACCTTGTACTTCGATTGAGAGGTGG 1162915
Score = 107 bits (118), Expect = 3e-18
Identities = 148/206 (72%), Gaps = 12/206 (6%)
Strand=Plus/Minus
Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881
||||||||| || | ||||| | ||||| ||||||||||| ||||| ||
Sbjct 1161774 AATGCAAATTTTCGTCAAAACCCTTACTGGGAAAACTATTACTTTAGA----------TC 1161725
Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941
|||| || ||| || ||| ||||| |||||||| || || || || ||||| ||
Sbjct 1161724 AGATACCATCGAAAATGTTAAAGCAAAAATTCAAGATAAGGAGGGTATTCCACCAGACCA 1161665
Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAA 156001
|||||||||||||| || |||||||| || |||||| | || | || || |||||
Sbjct 1161664 ACAAAGATTGATTTTCGCTGGTAAGCAACTTGAAGATGGACGCACACTTTCTGACTATAA 1161605
Query 156002 TATATCCAAA-GAGGCGACGCTTCAT 156026
||| || ||| ||| | || ||||||
Sbjct 1161604 TAT-TCAAAAGGAGTCAACTCTTCAT 1161580
>seq68
Length=1848670
Score = 118 bits (130), Expect = 2e-21
Identities = 137/185 (74%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 155820 AAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGAT 155879
|||||||| ||||| | ||||| ||||| || ||||| ||||| | ||||| ||||
Sbjct 813114 AAAATGCAGATATTCGTGAAAACTTTGACGGGTAAAACCATTACCCTTGAAGTGGAAGCA 813055
Query 155880 TCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939
|| |||| |||| ||| |||||| ||||| || ||||||||||| || || || ||
Sbjct 813054 TCGGATACTATTGAAAATGTGAAAGCAAAAATTCAGGATAAAGAAGGAATTCCACCCGAT 812995
Query 155940 CAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTAT 155999
|| ||| | | |||| ||| || || ||| | |||||| | ||| | |||||||||
Sbjct 812994 CAGCAACGTCTCATTTTTGCTGGAAAACAGTTAGAAGATGGACGTACTCTGTCAGATTAT 812935
Query 156000 AATAT 156004
|| ||
Sbjct 812934 AACAT 812930
>seq284
Length=1419496
Score = 96.9 bits (106), Expect = 5e-15
Identities = 167/239 (70%), Gaps = 8/239 (3%)
Strand=Plus/Minus
Query 18411 TTTCTTTGGAATCTTTTATATAAGTGTCGATTAACAAAGAATACATTTCAGAATGTATGC 18470
||||||| | |||| ||||| || |||||||||||||| |||||||| || || |
Sbjct 890252 TTTCTTTAGCATCTGCAATATATGTATCGATTAACAAAGAGTACATTTCTGAGTGCACAT 890193
Query 18471 TTTCCATAGCTATCTGAAAACTATAAAACGATCTAGCCTCGGGATATTGAATCTC---GC 18527
||||||| || | ||||| | |||||| | | ||||| | ||| | ||| ||
Sbjct 890192 TTTCCATTGCAACTTGAAAGCCATAAAAGCAACGTGCCTCTGTTATTTGCACCTCCTGGC 890133
Query 18528 TATAAAATCTTTCTACCAAATTCTCATTAACTATACCGTCAGCAGATGCGAAAAATGCCA 18587
| ||||| ||| || | ||| ||||| || || || |||| || || |||||||| |
Sbjct 890132 T---AAATCGTTCAACAAGATTTTCATTGACAATTCCATCAGAAGCAGCAAAAAATGCTA 890076
Query 18588 AAACATATTTAATGAAATGTTTTTCA-TTATCCTTGAGATTGTTCCATTCATCTATATC 18645
| |||| | || || | ||| ||| | || || | | ||||||| ||| || |||
Sbjct 890075 ATACATGTGATATAAATTTTTTCTCACTGATAGTT-AAACTGTTCCAGTCAAATAAATC 890018
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 731619815205600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |