Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Habropoda_20laboriosa_20[refseq_20GCF_5F001263275.1_202015-08-13]
27,566 sequences; 296,954,667 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq381 215 4e-51
seq65 96.9 3e-15
seq49 93.3 3e-14
seq68 91.5 1e-13
>seq381
Length=631576
Score = 215 bits (238), Expect = 4e-51
Identities = 281/389 (72%), Gaps = 0/389 (0%)
Strand=Plus/Plus
Query 34255 CCGTGATAACCGCATGCTTTGCAGCCCTGACAGATAATGTTCTTTTTAGCGGACACGATG 34314
||||||||||||||||||||||| ||||| |||| | || || | | || ||
Sbjct 238286 CCGTGATAACCGCATGCTTTGCACCCCTGTGAGATCGTCCCTTTCTTCGAGCTGACCATC 238345
Query 34315 AGCTCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCA 34374
||||| || || ||||| || || |||| || | ||| | || || ||||| || |||
Sbjct 238346 AGCTCTGTTTCAGGGTTATCGCAGGCCGGGCAGAGCACGTATTTACGAATGAATCCGTCA 238405
Query 34375 AGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTG 34434
|| || |||||||| || || ||||| || || || || ||||||| ||||||||||
Sbjct 238406 AGGAGATCCTGTAATTTGGTGGCATCGTGAGAACCATTCACTATGAATCTTTCGTTTTTG 238465
Query 34435 TAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCC 34494
|||| | || || || || || ||||| || || ||||| || || ||||| | ||
Sbjct 238466 AAATCAAATTGGGTCTGTGCTCCTAGCTCACAGCCAAAGTATTTGGTGGGGTAGGTAGCG 238525
Query 34495 GGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTG 34554
|| | |||| || || || | ||| |||||| ||||| || || || || || ||
Sbjct 238526 GGTCTGCCAATAGCTTTTGCAACGTCGACCATGTTTACGATCACGGTTTTAATACCATTC 238585
Query 34555 CCCTTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGCC 34614
||||||||||| |||||||| ||| ||||||||||| ||||| || || || ||
Sbjct 238586 CCCTTTCCTTCTACCTTGGCTTGGATCCGCGGCATTTTATAGCGATAAAATGCATCGCTG 238645
Query 34615 ACATTGCGGTTAACGTTCACAGTCCCCAT 34643
|| || || || ||||| || |||||||
Sbjct 238646 ACGTTACGATTTACGTTGACGCTCCCCAT 238674
>seq65
Length=771584
Score = 96.9 bits (106), Expect = 3e-15
Identities = 160/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGA 110331
|||||| || |||||||| || | || || |||||||| ||| | ||| ||| ||
Sbjct 538721 AATGCAGATCTTTGTCAAGACGCTGACGGGGAAAACCATCACCCTGGAAGTTGAGGCTTC 538780
Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391
|| || | | | || ||| |||||| ||||||||||| | || || ||
Sbjct 538781 AGACACAATAGAGAACGTTAAAGCCAAGATTCAAGACAAAGAAGGAATCCCTCCTGACCA 538840
Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451
|| | | || | ||| |||||||||||||| |||| | || | | ||||||||
Sbjct 538841 GCAGCGTTTGATCTTTGCTGGTAAACAGCTGGAAGATGGTCGCACTCTTTCAGATTACAA 538900
Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAAA 110502
||| || ||||| || || ||||| ||||||| |||| ||||| |||||
Sbjct 538901 CATCCAGAAAGAGTCGACACTGCACTTGGTGTTGCGACTCCGAGGAGGAAA 538951
Score = 86.0 bits (94), Expect = 5e-12
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGA 110331
|||||| || ||||||||||| | || || |||||||| ||| | ||| ||| ||
Sbjct 538265 AATGCAGATCTTTGTCAAAACACTCACGGGGAAAACCATCACCCTGGAAGTTGAGGCTTC 538324
Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391
|| || | | | || || |||||| |||||||| || | || || ||
Sbjct 538325 AGACACAATAGATAACGTTAAGGCTAAGATTCAAGACAAAGAGGGAATCCCTCCCGACCA 538384
Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451
|| | | || | ||| || |||||| |||| |||| | || | | ||||||||
Sbjct 538385 GCAGCGTTTGATATTTGCTGGCAAACAGTTGGAAGATGGGCGCACTCTTTCAGATTACAA 538444
Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAA 110501
||| |||||||| || || ||||| ||||||| |||| ||||| ||||
Sbjct 538445 CATCCAAAAAGAGTCCACACTGCACTTGGTGTTGCGACTCCGAGGAGGAA 538494
Score = 82.4 bits (90), Expect = 6e-11
Identities = 156/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGA 110331
|||||| || || ||||| || | || || |||||||| || ||||| ||| ||
Sbjct 536897 AATGCAGATCTTCGTCAAGACGCTCACAGGGAAAACCATCACACTCGAAGTTGAGGCTTC 536956
Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391
|| || | | | || || |||||| ||||||||||| | || || ||
Sbjct 536957 AGACACAATAGAGAACGTTAAGGCCAAGATTCAAGACAAAGAAGGAATCCCTCCCGACCA 537016
Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451
|| | | || | ||| ||||||||| |||| |||| | ||| | | ||||||||
Sbjct 537017 GCAGCGTTTGATCTTTGCTGGTAAACAGTTGGAAGATGGGCGCACACTTTCAGATTACAA 537076
Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAA 110501
|| ||||| || || || ||||| ||||||| |||| ||||| ||||
Sbjct 537077 TATCCAAAAGGAGTCCACCCTGCACTTGGTGTTGCGACTCCGAGGAGGAA 537126
>seq49
Length=1886280
Score = 93.3 bits (102), Expect = 3e-14
Identities = 158/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
||||| || |||||||| || || || |||||||| || ||| |||| || | |
Sbjct 1163141 ATGCAGATCTTTGTCAAGACATTGACTGGCAAAACAATAACCCTCGAGGTTGAAGCATCC 1163082
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
||||| | | | || || || ||| ||||| || || | ||| |||||
Sbjct 1163081 GATACAATTGAAAATGTGAAGGCAAAAATTCAGGACAAGGAGGGAATTCCCCCAGATCAG 1163022
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
|||||| | |||| ||| || ||||| || || |||| |||||| | | |||||||||
Sbjct 1163021 CAAAGATTGATTTTTGCTGGCAAACAACTTGAAGATGGAAGAACACTCTCTGATTACAAC 1162962
Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAA 110501
||||||||||| || || | ||| | || | || || |||| ||||
Sbjct 1162961 ATTCAAAAAGAGTCAACACTTCACCTTGTACTTCGATTGAGAGGTGGAA 1162913
>seq68
Length=1848670
Score = 91.5 bits (100), Expect = 1e-13
Identities = 136/193 (70%), Gaps = 0/193 (0%)
Strand=Plus/Minus
Query 110270 AAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCT 110329
|||||||| ||||| || |||||||| || || |||||||||||| | ||| ||| |
Sbjct 813114 AAAATGCAGATATTCGTGAAAACTTTGACGGGTAAAACCATTACCCTTGAAGTGGAAGCA 813055
Query 110330 GACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGAT 110389
|||||| | | | || ||| || ||| || |||||||| | || |||
Sbjct 813054 TCGGATACTATTGAAAATGTGAAAGCAAAAATTCAGGATAAAGAAGGAATTCCACCCGAT 812995
Query 110390 CAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTAC 110449
|| ||| | || |||| ||| || |||||| | || |||| | || || | |||||
Sbjct 812994 CAGCAACGTCTCATTTTTGCTGGAAAACAGTTAGAAGATGGACGTACTCTGTCAGATTAT 812935
Query 110450 AACATTCAAAAAG 110462
|||||||||||||
Sbjct 812934 AACATTCAAAAAG 812922
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 412702901478038
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |