Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Habropoda_20laboriosa_20[refseq_20GCF_5F001263275.1_202015-08-13] 27,566 sequences; 296,954,667 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq381 215 4e-51 seq65 96.9 3e-15 seq49 93.3 3e-14 seq68 91.5 1e-13 >seq381 Length=631576 Score = 215 bits (238), Expect = 4e-51 Identities = 281/389 (72%), Gaps = 0/389 (0%) Strand=Plus/Plus Query 34255 CCGTGATAACCGCATGCTTTGCAGCCCTGACAGATAATGTTCTTTTTAGCGGACACGATG 34314 ||||||||||||||||||||||| ||||| |||| | || || | | || || Sbjct 238286 CCGTGATAACCGCATGCTTTGCACCCCTGTGAGATCGTCCCTTTCTTCGAGCTGACCATC 238345 Query 34315 AGCTCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCA 34374 ||||| || || ||||| || || |||| || | ||| | || || ||||| || ||| Sbjct 238346 AGCTCTGTTTCAGGGTTATCGCAGGCCGGGCAGAGCACGTATTTACGAATGAATCCGTCA 238405 Query 34375 AGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTG 34434 || || |||||||| || || ||||| || || || || ||||||| |||||||||| Sbjct 238406 AGGAGATCCTGTAATTTGGTGGCATCGTGAGAACCATTCACTATGAATCTTTCGTTTTTG 238465 Query 34435 TAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCC 34494 |||| | || || || || || ||||| || || ||||| || || ||||| | || Sbjct 238466 AAATCAAATTGGGTCTGTGCTCCTAGCTCACAGCCAAAGTATTTGGTGGGGTAGGTAGCG 238525 Query 34495 GGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTG 34554 || | |||| || || || | ||| |||||| ||||| || || || || || || Sbjct 238526 GGTCTGCCAATAGCTTTTGCAACGTCGACCATGTTTACGATCACGGTTTTAATACCATTC 238585 Query 34555 CCCTTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGCC 34614 ||||||||||| |||||||| ||| ||||||||||| ||||| || || || || Sbjct 238586 CCCTTTCCTTCTACCTTGGCTTGGATCCGCGGCATTTTATAGCGATAAAATGCATCGCTG 238645 Query 34615 ACATTGCGGTTAACGTTCACAGTCCCCAT 34643 || || || || ||||| || ||||||| Sbjct 238646 ACGTTACGATTTACGTTGACGCTCCCCAT 238674 >seq65 Length=771584 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGA 110331 |||||| || |||||||| || | || || |||||||| ||| | ||| ||| || Sbjct 538721 AATGCAGATCTTTGTCAAGACGCTGACGGGGAAAACCATCACCCTGGAAGTTGAGGCTTC 538780 Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391 || || | | | || ||| |||||| ||||||||||| | || || || Sbjct 538781 AGACACAATAGAGAACGTTAAAGCCAAGATTCAAGACAAAGAAGGAATCCCTCCTGACCA 538840 Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451 || | | || | ||| |||||||||||||| |||| | || | | |||||||| Sbjct 538841 GCAGCGTTTGATCTTTGCTGGTAAACAGCTGGAAGATGGTCGCACTCTTTCAGATTACAA 538900 Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAAA 110502 ||| || ||||| || || ||||| ||||||| |||| ||||| ||||| Sbjct 538901 CATCCAGAAAGAGTCGACACTGCACTTGGTGTTGCGACTCCGAGGAGGAAA 538951 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGA 110331 |||||| || ||||||||||| | || || |||||||| ||| | ||| ||| || Sbjct 538265 AATGCAGATCTTTGTCAAAACACTCACGGGGAAAACCATCACCCTGGAAGTTGAGGCTTC 538324 Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391 || || | | | || || |||||| |||||||| || | || || || Sbjct 538325 AGACACAATAGATAACGTTAAGGCTAAGATTCAAGACAAAGAGGGAATCCCTCCCGACCA 538384 Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451 || | | || | ||| || |||||| |||| |||| | || | | |||||||| Sbjct 538385 GCAGCGTTTGATATTTGCTGGCAAACAGTTGGAAGATGGGCGCACTCTTTCAGATTACAA 538444 Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAA 110501 ||| |||||||| || || ||||| ||||||| |||| ||||| |||| Sbjct 538445 CATCCAAAAAGAGTCCACACTGCACTTGGTGTTGCGACTCCGAGGAGGAA 538494 Score = 82.4 bits (90), Expect = 6e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGA 110331 |||||| || || ||||| || | || || |||||||| || ||||| ||| || Sbjct 536897 AATGCAGATCTTCGTCAAGACGCTCACAGGGAAAACCATCACACTCGAAGTTGAGGCTTC 536956 Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391 || || | | | || || |||||| ||||||||||| | || || || Sbjct 536957 AGACACAATAGAGAACGTTAAGGCCAAGATTCAAGACAAAGAAGGAATCCCTCCCGACCA 537016 Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451 || | | || | ||| ||||||||| |||| |||| | ||| | | |||||||| Sbjct 537017 GCAGCGTTTGATCTTTGCTGGTAAACAGTTGGAAGATGGGCGCACACTTTCAGATTACAA 537076 Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAA 110501 || ||||| || || || ||||| ||||||| |||| ||||| |||| Sbjct 537077 TATCCAAAAGGAGTCCACCCTGCACTTGGTGTTGCGACTCCGAGGAGGAA 537126 >seq49 Length=1886280 Score = 93.3 bits (102), Expect = 3e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| || |||||||| || || || |||||||| || ||| |||| || | | Sbjct 1163141 ATGCAGATCTTTGTCAAGACATTGACTGGCAAAACAATAACCCTCGAGGTTGAAGCATCC 1163082 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 ||||| | | | || || || ||| ||||| || || | ||| ||||| Sbjct 1163081 GATACAATTGAAAATGTGAAGGCAAAAATTCAGGACAAGGAGGGAATTCCCCCAGATCAG 1163022 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 |||||| | |||| ||| || ||||| || || |||| |||||| | | ||||||||| Sbjct 1163021 CAAAGATTGATTTTTGCTGGCAAACAACTTGAAGATGGAAGAACACTCTCTGATTACAAC 1162962 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAA 110501 ||||||||||| || || | ||| | || | || || |||| |||| Sbjct 1162961 ATTCAAAAAGAGTCAACACTTCACCTTGTACTTCGATTGAGAGGTGGAA 1162913 >seq68 Length=1848670 Score = 91.5 bits (100), Expect = 1e-13 Identities = 136/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 110270 AAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCT 110329 |||||||| ||||| || |||||||| || || |||||||||||| | ||| ||| | Sbjct 813114 AAAATGCAGATATTCGTGAAAACTTTGACGGGTAAAACCATTACCCTTGAAGTGGAAGCA 813055 Query 110330 GACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGAT 110389 |||||| | | | || ||| || ||| || |||||||| | || ||| Sbjct 813054 TCGGATACTATTGAAAATGTGAAAGCAAAAATTCAGGATAAAGAAGGAATTCCACCCGAT 812995 Query 110390 CAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTAC 110449 || ||| | || |||| ||| || |||||| | || |||| | || || | ||||| Sbjct 812994 CAGCAACGTCTCATTTTTGCTGGAAAACAGTTAGAAGATGGACGTACTCTGTCAGATTAT 812935 Query 110450 AACATTCAAAAAG 110462 ||||||||||||| Sbjct 812934 AACATTCAAAAAG 812922 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412702901478038