Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Habropoda_20laboriosa_20[refseq_20GCF_5F001263275.1_202015-08-13]
27,566 sequences; 296,954,667 total letters
Query= NC_023177.1
Length=124688
Score E
Sequences producing significant alignments: (Bits) Value
seq65 95.1 1e-14
seq49 89.7 4e-13
seq68 84.2 2e-11
>seq65
Length=771584
Score = 95.1 bits (104), Expect = 1e-14
Identities = 160/232 (69%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614
|||||| || |||||||| || | || || |||||||| ||| | ||| ||||||
Sbjct 538721 AATGCAGATCTTTGTCAAGACGCTGACGGGGAAAACCATCACCCTGGAAGTTGAGGCTTC 538780
Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674
|| || | | | || ||| |||||| || |||||||| | || || ||
Sbjct 538781 AGACACAATAGAGAACGTTAAAGCCAAGATTCAAGACAAAGAAGGAATCCCTCCTGACCA 538840
Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734
|||| | | || | ||| |||||||||||||| || | || | | || |||||
Sbjct 538841 GCAGCGTTTGATCTTTGCTGGTAAACAGCTGGAAGATGGTCGCACTCTTTCAGATTACAA 538900
Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAAAT 107786
||| || || ||||| || ||||| |||||||| || | ||||| ||||||
Sbjct 538901 CATCCAGAAAGAGTCGACACTGCACTTGGTGTTGCGACTCCGAGGAGGAAAT 538952
Score = 91.5 bits (100), Expect = 1e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614
|||||| || || ||||| || | ||||| |||||||| || ||||| ||||||
Sbjct 536897 AATGCAGATCTTCGTCAAGACGCTCACAGGGAAAACCATCACACTCGAAGTTGAGGCTTC 536956
Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674
|| || | | | || || |||||| || |||||||| | || || ||
Sbjct 536957 AGACACAATAGAGAACGTTAAGGCCAAGATTCAAGACAAAGAAGGAATCCCTCCCGACCA 537016
Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734
|||| | | || | ||| ||||||||| |||| || | ||| | | || |||||
Sbjct 537017 GCAGCGTTTGATCTTTGCTGGTAAACAGTTGGAAGATGGGCGCACACTTTCAGATTACAA 537076
Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAA 107784
|| ||||||||||| || ||||| |||||||| || | ||||| ||||
Sbjct 537077 TATCCAAAAGGAGTCCACCCTGCACTTGGTGTTGCGACTCCGAGGAGGAA 537126
Score = 82.4 bits (90), Expect = 6e-11
Identities = 156/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614
|||||| || ||||||||||| | || || |||||||| ||| | ||| ||||||
Sbjct 538265 AATGCAGATCTTTGTCAAAACACTCACGGGGAAAACCATCACCCTGGAAGTTGAGGCTTC 538324
Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674
|| || | | | || || |||||| || ||||| || | || || ||
Sbjct 538325 AGACACAATAGATAACGTTAAGGCTAAGATTCAAGACAAAGAGGGAATCCCTCCCGACCA 538384
Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734
|||| | | || | ||| || |||||| |||| || | || | | || |||||
Sbjct 538385 GCAGCGTTTGATATTTGCTGGCAAACAGTTGGAAGATGGGCGCACTCTTTCAGATTACAA 538444
Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAA 107784
||| ||||| ||||| || ||||| |||||||| || | ||||| ||||
Sbjct 538445 CATCCAAAAAGAGTCCACACTGCACTTGGTGTTGCGACTCCGAGGAGGAA 538494
Score = 82.4 bits (90), Expect = 6e-11
Identities = 159/234 (68%), Gaps = 8/234 (3%)
Strand=Plus/Plus
Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614
|||||| || || ||||| || | || || |||||||| ||| | ||| ||||||
Sbjct 538493 AATGCAGATCTTCGTCAAGACGCTCACGGGGAAAACCATCACCCTGGAAGTTGAGGCTTC 538552
Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674
|| || | | | || ||| || || | || |||||||| | || || ||
Sbjct 538553 AGACACAATAGAGAACGTTAAAGCCAAAATCGTAGACAAAGAAGGAATCCCTTCTGACCA 538612
Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGA----GGACGCCAAAACAATGGCGGACT 107730
|||| | || || | ||| || || ||| |||| |||||| || | | || |
Sbjct 538613 GCAGCGTCTGATCTTTGCTGGGAAGCAGTTGGAAGATGGACGC----ACTCTTTCAGATT 538668
Query 107731 ACAACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAA 107784
||||||| ||||||||||| || ||||| |||||||| || | ||||| ||||
Sbjct 538669 ACAACATCCAAAAGGAGTCCACACTGCACTTGGTGTTGCGACTCCGAGGAGGAA 538722
>seq49
Length=1886280
Score = 89.7 bits (98), Expect = 4e-13
Identities = 157/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615
||||| || |||||||| || || || |||||||| || ||| |||| || || |
Sbjct 1163141 ATGCAGATCTTTGTCAAGACATTGACTGGCAAAACAATAACCCTCGAGGTTGAAGCATCC 1163082
Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675
||||| | | | || || ||| ||| || || || || | ||| ||||||
Sbjct 1163081 GATACAATTGAAAATGTGAAGGCAAAAATTCAGGACAAGGAGGGAATTCCCCCAGATCAG 1163022
Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735
|| ||| | |||| ||| || ||||| || || || | | |||| | | || ||||||
Sbjct 1163021 CAAAGATTGATTTTTGCTGGCAAACAACTTGAAGATGGAAGAACACTCTCTGATTACAAC 1162962
Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAA 107784
|||||||| ||||| || | ||| | || | ||||| |||| ||||
Sbjct 1162961 ATTCAAAAAGAGTCAACACTTCACCTTGTACTTCGATTGAGAGGTGGAA 1162913
>seq68
Length=1848670
Score = 84.2 bits (92), Expect = 2e-11
Identities = 133/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 107553 AAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCT 107612
|||||||| || || || |||||||| || || |||||||||||| | ||| ||| ||
Sbjct 813114 AAAATGCAGATATTCGTGAAAACTTTGACGGGTAAAACCATTACCCTTGAAGTGGAAGCA 813055
Query 107613 GGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGAT 107672
|||||| | | | || ||| ||| ||| ||||||||||| | || |||
Sbjct 813054 TCGGATACTATTGAAAATGTGAAAGCAAAAATTCAGGATAAAGAAGGAATTCCACCCGAT 812995
Query 107673 CAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTAC 107732
||||| | || |||| ||| || |||||| | || || | || || | || ||
Sbjct 812994 CAGCAACGTCTCATTTTTGCTGGAAAACAGTTAGAAGATGGACGTACTCTGTCAGATTAT 812935
Query 107733 AACATTCAAAA 107743
|||||||||||
Sbjct 812934 AACATTCAAAA 812924
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 398742793100974
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |