Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Habropoda_20laboriosa_20[refseq_20GCF_5F001263275.1_202015-08-13] 27,566 sequences; 296,954,667 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq65 95.1 1e-14 seq49 89.7 4e-13 seq68 84.2 2e-11 >seq65 Length=771584 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/232 (69%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614 |||||| || |||||||| || | || || |||||||| ||| | ||| |||||| Sbjct 538721 AATGCAGATCTTTGTCAAGACGCTGACGGGGAAAACCATCACCCTGGAAGTTGAGGCTTC 538780 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 || || | | | || ||| |||||| || |||||||| | || || || Sbjct 538781 AGACACAATAGAGAACGTTAAAGCCAAGATTCAAGACAAAGAAGGAATCCCTCCTGACCA 538840 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 |||| | | || | ||| |||||||||||||| || | || | | || ||||| Sbjct 538841 GCAGCGTTTGATCTTTGCTGGTAAACAGCTGGAAGATGGTCGCACTCTTTCAGATTACAA 538900 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAAAT 107786 ||| || || ||||| || ||||| |||||||| || | ||||| |||||| Sbjct 538901 CATCCAGAAAGAGTCGACACTGCACTTGGTGTTGCGACTCCGAGGAGGAAAT 538952 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614 |||||| || || ||||| || | ||||| |||||||| || ||||| |||||| Sbjct 536897 AATGCAGATCTTCGTCAAGACGCTCACAGGGAAAACCATCACACTCGAAGTTGAGGCTTC 536956 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 || || | | | || || |||||| || |||||||| | || || || Sbjct 536957 AGACACAATAGAGAACGTTAAGGCCAAGATTCAAGACAAAGAAGGAATCCCTCCCGACCA 537016 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 |||| | | || | ||| ||||||||| |||| || | ||| | | || ||||| Sbjct 537017 GCAGCGTTTGATCTTTGCTGGTAAACAGTTGGAAGATGGGCGCACACTTTCAGATTACAA 537076 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAA 107784 || ||||||||||| || ||||| |||||||| || | ||||| |||| Sbjct 537077 TATCCAAAAGGAGTCCACCCTGCACTTGGTGTTGCGACTCCGAGGAGGAA 537126 Score = 82.4 bits (90), Expect = 6e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614 |||||| || ||||||||||| | || || |||||||| ||| | ||| |||||| Sbjct 538265 AATGCAGATCTTTGTCAAAACACTCACGGGGAAAACCATCACCCTGGAAGTTGAGGCTTC 538324 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 || || | | | || || |||||| || ||||| || | || || || Sbjct 538325 AGACACAATAGATAACGTTAAGGCTAAGATTCAAGACAAAGAGGGAATCCCTCCCGACCA 538384 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 |||| | | || | ||| || |||||| |||| || | || | | || ||||| Sbjct 538385 GCAGCGTTTGATATTTGCTGGCAAACAGTTGGAAGATGGGCGCACTCTTTCAGATTACAA 538444 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAA 107784 ||| ||||| ||||| || ||||| |||||||| || | ||||| |||| Sbjct 538445 CATCCAAAAAGAGTCCACACTGCACTTGGTGTTGCGACTCCGAGGAGGAA 538494 Score = 82.4 bits (90), Expect = 6e-11 Identities = 159/234 (68%), Gaps = 8/234 (3%) Strand=Plus/Plus Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614 |||||| || || ||||| || | || || |||||||| ||| | ||| |||||| Sbjct 538493 AATGCAGATCTTCGTCAAGACGCTCACGGGGAAAACCATCACCCTGGAAGTTGAGGCTTC 538552 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 || || | | | || ||| || || | || |||||||| | || || || Sbjct 538553 AGACACAATAGAGAACGTTAAAGCCAAAATCGTAGACAAAGAAGGAATCCCTTCTGACCA 538612 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGA----GGACGCCAAAACAATGGCGGACT 107730 |||| | || || | ||| || || ||| |||| |||||| || | | || | Sbjct 538613 GCAGCGTCTGATCTTTGCTGGGAAGCAGTTGGAAGATGGACGC----ACTCTTTCAGATT 538668 Query 107731 ACAACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAA 107784 ||||||| ||||||||||| || ||||| |||||||| || | ||||| |||| Sbjct 538669 ACAACATCCAAAAGGAGTCCACACTGCACTTGGTGTTGCGACTCCGAGGAGGAA 538722 >seq49 Length=1886280 Score = 89.7 bits (98), Expect = 4e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || |||||||| || || || |||||||| || ||| |||| || || | Sbjct 1163141 ATGCAGATCTTTGTCAAGACATTGACTGGCAAAACAATAACCCTCGAGGTTGAAGCATCC 1163082 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 ||||| | | | || || ||| ||| || || || || | ||| |||||| Sbjct 1163081 GATACAATTGAAAATGTGAAGGCAAAAATTCAGGACAAGGAGGGAATTCCCCCAGATCAG 1163022 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 || ||| | |||| ||| || ||||| || || || | | |||| | | || |||||| Sbjct 1163021 CAAAGATTGATTTTTGCTGGCAAACAACTTGAAGATGGAAGAACACTCTCTGATTACAAC 1162962 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAA 107784 |||||||| ||||| || | ||| | || | ||||| |||| |||| Sbjct 1162961 ATTCAAAAAGAGTCAACACTTCACCTTGTACTTCGATTGAGAGGTGGAA 1162913 >seq68 Length=1848670 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 107553 AAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCT 107612 |||||||| || || || |||||||| || || |||||||||||| | ||| ||| || Sbjct 813114 AAAATGCAGATATTCGTGAAAACTTTGACGGGTAAAACCATTACCCTTGAAGTGGAAGCA 813055 Query 107613 GGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGAT 107672 |||||| | | | || ||| ||| ||| ||||||||||| | || ||| Sbjct 813054 TCGGATACTATTGAAAATGTGAAAGCAAAAATTCAGGATAAAGAAGGAATTCCACCCGAT 812995 Query 107673 CAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTAC 107732 ||||| | || |||| ||| || |||||| | || || | || || | || || Sbjct 812994 CAGCAACGTCTCATTTTTGCTGGAAAACAGTTAGAAGATGGACGTACTCTGTCAGATTAT 812935 Query 107733 AACATTCAAAA 107743 ||||||||||| Sbjct 812934 AACATTCAAAA 812924 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398742793100974