Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Habropoda_20laboriosa_20[refseq_20GCF_5F001263275.1_202015-08-13]
27,566 sequences; 296,954,667 total letters
Query= NC_023426.1
Length=245717
Score E
Sequences producing significant alignments: (Bits) Value
seq68 138 2e-27
seq394 120 5e-22
seq49 111 2e-19
>seq68
Length=1848670
Score = 138 bits (152), Expect = 2e-27
Identities = 146/190 (77%), Gaps = 2/190 (1%)
Strand=Plus/Minus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAA-CATAAC 146090
|||| |||||| | ||||| || || || ||||| ||||| |||| || ||| |||
Sbjct 813110 TGCAGATATTCGTGAAAACTTTGACGGGTAAAACCATTACCCTTGAAGTGGAAGCATCG- 813052
Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150
||||||||| ||||||| ||| ||||| || ||||||||| ||||||||||||||
Sbjct 813051 GATACTATTGAAAATGTGAAAGCAAAAATTCAGGATAAAGAAGGAATTCCACCCGATCAG 812992
Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210
||| | ||||||||||| || ||||| ||||| ||| | || | ||||||||||
Sbjct 812991 CAACGTCTCATTTTTGCTGGAAAACAGTTAGAAGATGGACGTACTCTGTCAGATTATAAC 812932
Query 146211 ATACAAAAAG 146220
|| |||||||
Sbjct 812931 ATTCAAAAAG 812922
>seq394
Length=4544675
Score = 120 bits (132), Expect = 5e-22
Identities = 102/126 (81%), Gaps = 0/126 (0%)
Strand=Plus/Plus
Query 146132 AGGCATTCCACCCGATCAACAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAG 146191
|||||||||||| ||||| || ||| | || ||||| || ||||||||||| ||| |||
Sbjct 4399682 AGGCATTCCACCTGATCAGCAGAGATTAATCTTTGCTGGCAAACAATTAGAAGATGGTAG 4399741
Query 146192 AACGTTAACAGATTATAATATACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAG 146251
||| ||| |||||||||| || || || ||||| || | ||||| |||||||| |||||
Sbjct 4399742 AACTTTATCAGATTATAACATTCAGAAGGAATCTACATTACATTTGGTATTACGTTTAAG 4399801
Query 146252 AGGAGG 146257
||| ||
Sbjct 4399802 AGGTGG 4399807
>seq49
Length=1886280
Score = 111 bits (122), Expect = 2e-19
Identities = 160/226 (71%), Gaps = 0/226 (0%)
Strand=Plus/Minus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
||||||| ||| | || || | || ||||| || || ||| | || || ||| | |
Sbjct 1162912 TGCAAATTTTCGTCAAGACCCTTACGGGAAAGACGATCACTTTAGAAGTTGAAGCTTCAG 1162853
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
|||| || ||||||| ||| ||||| ||| ||| || || |||||||| || ||||
Sbjct 1162852 ATACCATCGAAAATGTTAAAGCAAAAATTCAAGATAAGGAGGGTATTCCACCAGACCAAC 1162793
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
| ||| | ||||| || ||||| ||| | || ||| | || | | ||||| ||||
Sbjct 1162792 AGAGATTGATTTTCGCTGGTAAGCAACTTGAAGATGGACGCACACTCTCTGATTACAATA 1162733
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257
| ||||||||||| ||| ||||| | ||| | ||| | |||| ||
Sbjct 1162732 TTCAAAAAGAATCAACTCTCCATCTTGTACTTCGACTCCGAGGTGG 1162687
Score = 102 bits (112), Expect = 1e-16
Identities = 158/226 (70%), Gaps = 0/226 (0%)
Strand=Plus/Minus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
||||||| ||| | ||||| | || |||||||| |||||| | || || ||| | |
Sbjct 1161554 TGCAAATTTTCGTCAAAACCCTTACTGGAAAAACTATTACTTTAGAAGTTGAAGCTTCTG 1161495
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
|||| ||| | ||||| || ||||| || || || ||||||||||| || ||||
Sbjct 1161494 ATACGATTGAGAATGTGAAGGCAAAAATTCAGGACAAGGAGGGCATTCCACCAGACCAAC 1161435
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
||||| | ||||| || ||||| ||| | || ||| | || | | || ||||| |
Sbjct 1161434 AAAGATTGATTTTCGCTGGTAAGCAACTTGAAGATGGACGCACACTTTCGGACTATAACA 1161375
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257
| ||||| || || ||| | ||| | || | ||| | |||||||
Sbjct 1161374 TTCAAAAGGAGTCAACTCTTCATCTCGTTCTGCGACTCCGAGGAGG 1161329
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 785895506712720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |