Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Habropoda_20laboriosa_20[refseq_20GCF_5F001263275.1_202015-08-13] 27,566 sequences; 296,954,667 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq68 138 2e-27 seq394 120 5e-22 seq49 111 2e-19 >seq68 Length=1848670 Score = 138 bits (152), Expect = 2e-27 Identities = 146/190 (77%), Gaps = 2/190 (1%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAA-CATAAC 146090 |||| |||||| | ||||| || || || ||||| ||||| |||| || ||| ||| Sbjct 813110 TGCAGATATTCGTGAAAACTTTGACGGGTAAAACCATTACCCTTGAAGTGGAAGCATCG- 813052 Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 ||||||||| ||||||| ||| ||||| || ||||||||| |||||||||||||| Sbjct 813051 GATACTATTGAAAATGTGAAAGCAAAAATTCAGGATAAAGAAGGAATTCCACCCGATCAG 812992 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210 ||| | ||||||||||| || ||||| ||||| ||| | || | |||||||||| Sbjct 812991 CAACGTCTCATTTTTGCTGGAAAACAGTTAGAAGATGGACGTACTCTGTCAGATTATAAC 812932 Query 146211 ATACAAAAAG 146220 || ||||||| Sbjct 812931 ATTCAAAAAG 812922 >seq394 Length=4544675 Score = 120 bits (132), Expect = 5e-22 Identities = 102/126 (81%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 146132 AGGCATTCCACCCGATCAACAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAG 146191 |||||||||||| ||||| || ||| | || ||||| || ||||||||||| ||| ||| Sbjct 4399682 AGGCATTCCACCTGATCAGCAGAGATTAATCTTTGCTGGCAAACAATTAGAAGATGGTAG 4399741 Query 146192 AACGTTAACAGATTATAATATACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAG 146251 ||| ||| |||||||||| || || || ||||| || | ||||| |||||||| ||||| Sbjct 4399742 AACTTTATCAGATTATAACATTCAGAAGGAATCTACATTACATTTGGTATTACGTTTAAG 4399801 Query 146252 AGGAGG 146257 ||| || Sbjct 4399802 AGGTGG 4399807 >seq49 Length=1886280 Score = 111 bits (122), Expect = 2e-19 Identities = 160/226 (71%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| ||| | || || | || ||||| || || ||| | || || ||| | | Sbjct 1162912 TGCAAATTTTCGTCAAGACCCTTACGGGAAAGACGATCACTTTAGAAGTTGAAGCTTCAG 1162853 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| || ||||||| ||| ||||| ||| ||| || || |||||||| || |||| Sbjct 1162852 ATACCATCGAAAATGTTAAAGCAAAAATTCAAGATAAGGAGGGTATTCCACCAGACCAAC 1162793 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | ||| | ||||| || ||||| ||| | || ||| | || | | ||||| |||| Sbjct 1162792 AGAGATTGATTTTCGCTGGTAAGCAACTTGAAGATGGACGCACACTCTCTGATTACAATA 1162733 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257 | ||||||||||| ||| ||||| | ||| | ||| | |||| || Sbjct 1162732 TTCAAAAAGAATCAACTCTCCATCTTGTACTTCGACTCCGAGGTGG 1162687 Score = 102 bits (112), Expect = 1e-16 Identities = 158/226 (70%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| ||| | ||||| | || |||||||| |||||| | || || ||| | | Sbjct 1161554 TGCAAATTTTCGTCAAAACCCTTACTGGAAAAACTATTACTTTAGAAGTTGAAGCTTCTG 1161495 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| ||| | ||||| || ||||| || || || ||||||||||| || |||| Sbjct 1161494 ATACGATTGAGAATGTGAAGGCAAAAATTCAGGACAAGGAGGGCATTCCACCAGACCAAC 1161435 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 ||||| | ||||| || ||||| ||| | || ||| | || | | || ||||| | Sbjct 1161434 AAAGATTGATTTTCGCTGGTAAGCAACTTGAAGATGGACGCACACTTTCGGACTATAACA 1161375 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257 | ||||| || || ||| | ||| | || | ||| | ||||||| Sbjct 1161374 TTCAAAAGGAGTCAACTCTTCATCTCGTTCTGCGACTCCGAGGAGG 1161329 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 785895506712720