Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Habropoda_20laboriosa_20[refseq_20GCF_5F001263275.1_202015-08-13] 27,566 sequences; 296,954,667 total letters Query= NC_023611.1 Length=198533 Score E Sequences producing significant alignments: (Bits) Value seq66 91.5 2e-13 seq127 86.0 8e-12 >seq66 Length=2158695 Score = 91.5 bits (100), Expect = 2e-13 Identities = 138/194 (71%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 163001 AAGGTTGCTCAATTAAGTGGGTATGTTGCGGAACAAACAGACTATAAACACGGTGAACAA 163060 || || || |||||| ||| | |||||| ||||| ||| ||| | || |||||| Sbjct 994721 AAAGTGGCACAATTAGCTGGTTCTGTTGCTGAACATTCAGCGTATCATCATGGTGAAGTT 994780 Query 163061 AAT-TTATGTGAAACTATAATTAAGTTTGCCCAAGATTTTGTTGGTACAAATAATATAGC 163119 | |||||| | |||| ||||| |||| ||| ||||||| || | ||||| ||| Sbjct 994781 TCTCTTATGTCGA-CTATTATTAATCTTGCACAAAATTTTGTAGGAAGTAATAACATAAA 994839 Query 163120 ATTACTTGAACCTGATGGTCAATTTGGTACCAGATTAGAAGGAGGTAAAGATTCTGCGGC 163179 ||||| |||| |||||||||||||||| ||| | ||||| |||||| | ||| Sbjct 994840 TATACTTCAACCAAATGGTCAATTTGGTACGAGACTCACGGGAGGAAAAGATGCAGCGAG 994899 Query 163180 ATCAAGATATATTT 163193 | ||||||||| Sbjct 994900 TCCTCGATATATTT 994913 >seq127 Length=5433866 Score = 86.0 bits (94), Expect = 8e-12 Identities = 126/178 (71%), Gaps = 3/178 (2%) Strand=Plus/Plus Query 193019 TGGTATTAATGCTATTGTTGCTATAGCTTGCTATACTGGTTATAATCAAGAAGACAGTAT 193078 ||| |||||| ||| ||||||||| || ||||||||||||||||||||||| ||| | Sbjct 3558439 TGGAATTAATAGTATAGTTGCTATATTATGTTATACTGGTTATAATCAAGAAGATAGTGT 3558498 Query 193079 TATTTTAAATAAAGCTTCTATTGAAAGAGGATTATTTGGTACTATAACTTATAATACATA 193138 ||| || ||| | || |||||||||| || ||| | || || ||||| | || Sbjct 3558499 TATCTTGAATGCCAGTGCTGTTGAAAGAGGTTTCTTTCGATCTGTATTTTATAGATCTTA 3558558 Query 193139 TACAGTTGAAGAAACAAA---AAATGGAATTATAGAAGAAAAAATAGATATACCTGCT 193193 || || | ||| | || || |||| | ||||||| || | || | |||| || Sbjct 3558559 TAAAGATTCAGAGTCTAAGAGAATTGGAGATCAAGAAGAACAATTTGAGAAACCTACT 3558616 Score = 82.4 bits (90), Expect = 1e-10 Identities = 124/172 (72%), Gaps = 6/172 (3%) Strand=Plus/Plus Query 193440 CGTATACCTGAAATAGGGGATAAATTTTGTTCAGGA-ATGGCCCAAAAAGGAACTTGTGG 193498 ||||| || |||| || || |||||| ||| | |||| | ||||||| |||||||| Sbjct 3558969 CGTATTCCACAAATCGGTGACAAATTTGCTTCGCGTCATGGAC-AAAAAGGTACTTGTGG 3559027 Query 193499 TATGATTTATTCA--CAAGAAGATATGCCATTTACAGCTTCAGGTATGGTACCAGATATT 193556 || | || || |||||||||||||||||| || | ||| | ||||||||| Sbjct 3559028 AAT--TCAATACAGGCAAGAAGATATGCCATTTTCATGTGAAGGCCTTACACCAGATATA 3559085 Query 193557 ATTATTAATCCAAATTGTATTCCATCCAGAATGACCATTAATCAAATTATTG 193608 || |||||||| || ||||||||| | ||||| ||| ||| | |||| Sbjct 3559086 ATAATTAATCCCCATGCTATTCCATCACGTATGACTATTGGTCATTTAATTG 3559137 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 634958733678480