Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Habropoda_20laboriosa_20[refseq_20GCF_5F001263275.1_202015-08-13]
27,566 sequences; 296,954,667 total letters
Query= NC_023611.1
Length=198533
Score E
Sequences producing significant alignments: (Bits) Value
seq66 91.5 2e-13
seq127 86.0 8e-12
>seq66
Length=2158695
Score = 91.5 bits (100), Expect = 2e-13
Identities = 138/194 (71%), Gaps = 2/194 (1%)
Strand=Plus/Plus
Query 163001 AAGGTTGCTCAATTAAGTGGGTATGTTGCGGAACAAACAGACTATAAACACGGTGAACAA 163060
|| || || |||||| ||| | |||||| ||||| ||| ||| | || ||||||
Sbjct 994721 AAAGTGGCACAATTAGCTGGTTCTGTTGCTGAACATTCAGCGTATCATCATGGTGAAGTT 994780
Query 163061 AAT-TTATGTGAAACTATAATTAAGTTTGCCCAAGATTTTGTTGGTACAAATAATATAGC 163119
| |||||| | |||| ||||| |||| ||| ||||||| || | ||||| |||
Sbjct 994781 TCTCTTATGTCGA-CTATTATTAATCTTGCACAAAATTTTGTAGGAAGTAATAACATAAA 994839
Query 163120 ATTACTTGAACCTGATGGTCAATTTGGTACCAGATTAGAAGGAGGTAAAGATTCTGCGGC 163179
||||| |||| |||||||||||||||| ||| | ||||| |||||| | |||
Sbjct 994840 TATACTTCAACCAAATGGTCAATTTGGTACGAGACTCACGGGAGGAAAAGATGCAGCGAG 994899
Query 163180 ATCAAGATATATTT 163193
| |||||||||
Sbjct 994900 TCCTCGATATATTT 994913
>seq127
Length=5433866
Score = 86.0 bits (94), Expect = 8e-12
Identities = 126/178 (71%), Gaps = 3/178 (2%)
Strand=Plus/Plus
Query 193019 TGGTATTAATGCTATTGTTGCTATAGCTTGCTATACTGGTTATAATCAAGAAGACAGTAT 193078
||| |||||| ||| ||||||||| || ||||||||||||||||||||||| ||| |
Sbjct 3558439 TGGAATTAATAGTATAGTTGCTATATTATGTTATACTGGTTATAATCAAGAAGATAGTGT 3558498
Query 193079 TATTTTAAATAAAGCTTCTATTGAAAGAGGATTATTTGGTACTATAACTTATAATACATA 193138
||| || ||| | || |||||||||| || ||| | || || ||||| | ||
Sbjct 3558499 TATCTTGAATGCCAGTGCTGTTGAAAGAGGTTTCTTTCGATCTGTATTTTATAGATCTTA 3558558
Query 193139 TACAGTTGAAGAAACAAA---AAATGGAATTATAGAAGAAAAAATAGATATACCTGCT 193193
|| || | ||| | || || |||| | ||||||| || | || | |||| ||
Sbjct 3558559 TAAAGATTCAGAGTCTAAGAGAATTGGAGATCAAGAAGAACAATTTGAGAAACCTACT 3558616
Score = 82.4 bits (90), Expect = 1e-10
Identities = 124/172 (72%), Gaps = 6/172 (3%)
Strand=Plus/Plus
Query 193440 CGTATACCTGAAATAGGGGATAAATTTTGTTCAGGA-ATGGCCCAAAAAGGAACTTGTGG 193498
||||| || |||| || || |||||| ||| | |||| | ||||||| ||||||||
Sbjct 3558969 CGTATTCCACAAATCGGTGACAAATTTGCTTCGCGTCATGGAC-AAAAAGGTACTTGTGG 3559027
Query 193499 TATGATTTATTCA--CAAGAAGATATGCCATTTACAGCTTCAGGTATGGTACCAGATATT 193556
|| | || || |||||||||||||||||| || | ||| | |||||||||
Sbjct 3559028 AAT--TCAATACAGGCAAGAAGATATGCCATTTTCATGTGAAGGCCTTACACCAGATATA 3559085
Query 193557 ATTATTAATCCAAATTGTATTCCATCCAGAATGACCATTAATCAAATTATTG 193608
|| |||||||| || ||||||||| | ||||| ||| ||| | ||||
Sbjct 3559086 ATAATTAATCCCCATGCTATTCCATCACGTATGACTATTGGTCATTTAATTG 3559137
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 634958733678480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |