Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Habropoda_20laboriosa_20[refseq_20GCF_5F001263275.1_202015-08-13]
27,566 sequences; 296,954,667 total letters
Query= NC_023615.1
Length=196456
Score E
Sequences producing significant alignments: (Bits) Value
seq66 100 4e-16
seq127 82.4 1e-10
>seq66
Length=2158695
Score = 100 bits (110), Expect = 4e-16
Identities = 140/194 (72%), Gaps = 2/194 (1%)
Strand=Plus/Plus
Query 165163 AAAGTTGCTCAATTAAGTGGGTATGTTGCAGAACAAACAGATTATAAACATGGTGAACAA 165222
||||| || |||||| ||| | |||||| ||||| ||| ||| | |||||||||
Sbjct 994721 AAAGTGGCACAATTAGCTGGTTCTGTTGCTGAACATTCAGCGTATCATCATGGTGAAGTT 994780
Query 165223 AAT-TTATGTGAAACTATAATTAAGTTTGCCCAAGATTTTGTTGGTACAAATAATATAGC 165281
| |||||| | |||| ||||| |||| ||| ||||||| || | ||||| |||
Sbjct 994781 TCTCTTATGTCGA-CTATTATTAATCTTGCACAAAATTTTGTAGGAAGTAATAACATAAA 994839
Query 165282 ATTACTTGAACCTGATGGTCAATTTGGTACCAGATTAGAAGGAGGTAAAGATTCTGCGGC 165341
||||| |||| |||||||||||||||| ||| | ||||| |||||| | |||
Sbjct 994840 TATACTTCAACCAAATGGTCAATTTGGTACGAGACTCACGGGAGGAAAAGATGCAGCGAG 994899
Query 165342 ATCAAGATATATTT 165355
| |||||||||
Sbjct 994900 TCCTCGATATATTT 994913
>seq127
Length=5433866
Score = 82.4 bits (90), Expect = 1e-10
Identities = 124/172 (72%), Gaps = 6/172 (3%)
Strand=Plus/Plus
Query 192993 CGTATACCTGAAATAGGGGATAAATTTTGTTCGGGA-ATGGCCCAAAAAGGAACTTGTGG 193051
||||| || |||| || || |||||| |||| | |||| | ||||||| ||||||||
Sbjct 3558969 CGTATTCCACAAATCGGTGACAAATTTGCTTCGCGTCATGGAC-AAAAAGGTACTTGTGG 3559027
Query 193052 TATGATTTATTCA--CAAGAAGATATGCCATTTACAACTTCAGGTATGGTACCAGATATT 193109
|| | || || |||||||||||||||||| || | ||| | |||||||||
Sbjct 3559028 AAT--TCAATACAGGCAAGAAGATATGCCATTTTCATGTGAAGGCCTTACACCAGATATA 3559085
Query 193110 ATTATTAATCCAAATTGTATTCCGTCCAGAATGACCATTAATCAAATTATTG 193161
|| |||||||| || |||||| || | ||||| ||| ||| | ||||
Sbjct 3559086 ATAATTAATCCCCATGCTATTCCATCACGTATGACTATTGGTCATTTAATTG 3559137
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628314623861760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |