Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Habropoda_20laboriosa_20[refseq_20GCF_5F001263275.1_202015-08-13]
27,566 sequences; 296,954,667 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq966 143 6e-29
seq66 102 2e-16
seq59 89.7 1e-12
seq400 86.0 1e-11
seq165 84.2 5e-11
>seq966
Length=245293
Score = 143 bits (158), Expect = 6e-29
Identities = 124/151 (82%), Gaps = 2/151 (1%)
Strand=Plus/Plus
Query 305336 TTCAATAGGCAACCATCACTGCATAAAATGTCTATGATGGCTCATAAAGTCAAAGTATTA 305395
||||||||||||||||| | |||||| || ||| ||||| ||||||| |||||||||
Sbjct 130617 TTCAATAGGCAACCATCTTTACATAAATTGAGTATTATGGCACATAAAGCAAAAGTATTA 130676
Query 305396 TCTGGATTG-ACATTTCGATTAAATGTAAGTGCTTGTACGCCTTATAATGCGGATTTTGA 305454
| || | |||||| |||| |||| | ||| |||||| ||||||||||| ||||||||
Sbjct 130677 GAT-CATAGAACATTTAGATTTAATGAATGTGTTTGTACTCCTTATAATGCTGATTTTGA 130735
Query 305455 TGGAGATGAAATGAATATGCATGTACCTCAA 305485
||| |||||||||||| | ||| ||||||||
Sbjct 130736 TGGTGATGAAATGAATTTACATTTACCTCAA 130766
>seq66
Length=2158695
Score = 102 bits (112), Expect = 2e-16
Identities = 179/256 (70%), Gaps = 6/256 (2%)
Strand=Plus/Plus
Query 279838 TAATTATGATGTTCATCGTTCTATTCCTCATTTAATGGATGGTTTGAAACCTTCACAGCG 279897
|||||||||| | || ||||| ||| || | || |||||||| |||||| ||| |
Sbjct 994615 TAATTATGATAATGTGCGATCTATACCTAATATGATCGATGGTTTCAAACCTGGCCAGAG 994674
Query 279898 TAAGATTATATTCAGTTGTTTCAAAAGAAAATTGGTAAAGG--AAATTCGTGTTGCTCAG 279955
|| | | | | |||||| ||| | || | |||| | || | || || ||
Sbjct 994675 GAAAGTGGTGTATACTTGTTTAAAACGTAAC--GATAAACGTGAAGTGAAAGTGGCACAA 994732
Query 279956 TTAGCAGGTTATGTTTCAGAACATGCAGGTTATCATCACGGTGAAGCGTCTCTTCAAGGT 280015
||||| |||| |||| | |||||| ||| |||||||| ||||||| |||||| | |
Sbjct 994733 TTAGCTGGTTCTGTTGCTGAACATTCAGCGTATCATCATGGTGAAGTTTCTCTT-ATGTC 994791
Query 280016 G-CTATTGTAGGTCTTGCCCAAGATTTTATGGCTTCAAACAACTTAAATCTGCTTTCACC 280074
| ||||| | |||||| ||| ||||| | | || ||| ||||| | ||| |||
Sbjct 994792 GACTATTATTAATCTTGCACAAAATTTTGTAGGAAGTAATAACATAAATATACTTCAACC 994851
Query 280075 AAATGGTCAATTTGGT 280090
||||||||||||||||
Sbjct 994852 AAATGGTCAATTTGGT 994867
>seq59
Length=4191719
Score = 89.7 bits (98), Expect = 1e-12
Identities = 79/99 (80%), Gaps = 0/99 (0%)
Strand=Plus/Plus
Query 111057 CAAGTTGAAACTGGAACTCCTTATATTTTGTATAAAGATCATATTAATCGCAAATCTAAT 111116
||||||||||| ||||||||||| || | ||||||||||| ||||| ||||| |||
Sbjct 763867 CAAGTTGAAACAGGAACTCCTTACATGCTTTATAAAGATCACTGCAATCGTAAATCAAAT 763926
Query 111117 CAAATGAATTTAGGAACAATTAAGTCTAGTAATTTGTGC 111155
|| ||| |||||||||| |||| ||| ||||| |||
Sbjct 763927 CATCAAAATATAGGAACAATCAAGTGTAGCAATTTATGC 763965
>seq400
Length=2387259
Score = 86.0 bits (94), Expect = 1e-11
Identities = 115/156 (74%), Gaps = 8/156 (5%)
Strand=Plus/Minus
Query 305336 TTCAATAGGCAACCATCACTGCATAAAATGTCTATGATGGCTCATAAAGTCAAAGTATTA 305395
|| ||| | ||||| | |||| |||||| |||||||| ||| | ||| ||||| |||
Sbjct 1055098 TTTAATCGTCAACCGACTTTGCACAAAATGAGTATGATGGGTCACAGAGTGAAAGTTTTA 1055039
Query 305396 TC-TGGATTGACATTTCGATTAAATGTAAGTGCTTGTACG---CCTTATAATGCGGATTT 305451
| |||| | ||||| || | ||| | || ||||| || |||||||| |||||
Sbjct 1055038 CCATGGAGT-ACATTCCGTATGAATCTTAGC---TGTACCTCACCGTATAATGCCGATTT 1054983
Query 305452 TGATGGAGATGAAATGAATATGCATGTACCTCAATC 305487
||| || |||||||||||| |||| ||||| || ||
Sbjct 1054982 TGACGGCGATGAAATGAATTTGCACGTACCACAGTC 1054947
>seq165
Length=882089
Score = 84.2 bits (92), Expect = 5e-11
Identities = 134/190 (71%), Gaps = 2/190 (1%)
Strand=Plus/Minus
Query 72220 GTAATGAAGAATTGCGAGTTATTTGAATCAGGACCCGAGTTAGCCATAGAAACCAAACCT 72279
||||| ||||| || | ||| | ||||||||| | || |||||||||| | |||
Sbjct 61920 GTAATAAAGAACTGGCTGCCATTAGTATCAGGACCAGCATTTGCCATAGAAAGAATACCA 61861
Query 72280 GCTTCTGAATGCTTTAATAAGAAATTCTCATCTTCAAAAGTTTCTCCATATATAC-TTTG 72338
| ||| | |||||| || ||||| |||||||| | ||| || |||||| || |||
Sbjct 61860 GGTTCAGTATGCTTCAAAAAGAAGTTCTCATCATTAAATTTTGTTCCATAAATGGATTTT 61801
Query 72339 ACCTGAGCTTCCATCAAAGTTCACAATATCACCTCCTTGAACCATAAAATTATTAATTAC 72398
|| || | |||| | ||| | |||||||||||| ||| ||||| ||| ||
Sbjct 61800 CCCCCAG-TGCCATTATGGTTAGTGAAATCACCTCCTTGGCACATGAAATTTGGAATCAC 61742
Query 72399 TCTATGGAAA 72408
|||||| |||
Sbjct 61741 TCTATGAAAA 61732
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186393630328926
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |