Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Habropoda_20laboriosa_20[refseq_20GCF_5F001263275.1_202015-08-13] 27,566 sequences; 296,954,667 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq68 118 1e-21 seq65 91.5 1e-13 >seq68 Length=1848670 Score = 118 bits (130), Expect = 1e-21 Identities = 140/190 (74%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 131934 CTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAATAGA 131993 ||||||||||||| || || || ||||| |||||| | |||||| || | | | | Sbjct 812922 CTTTTTGAATGTTATAATCTGACAGAGTACGTCCATCTTCTAACTGTTTTCCAGCAAAAA 812981 Query 131994 TTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAACTGTT 132053 | ||||| || ||||| || || || ||||||||||| ||||||| ||||| | || Sbjct 812982 TGAGACGTTGCTGATCGGGTGGAATTCCTTCTTTATCCTGAATTTTTGCTTTCACATTTT 813041 Query 132054 CCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTATGA 132113 | | |||||| | | |||||||| | || | |||||||| |||| |||||| | || Sbjct 813042 CAATAGTATCCGATGCTTCCACTTCAAGGGTAATGGTTTTACCCGTCAAAGTTTTCACGA 813101 Query 132114 AAATCTGCAT 132123 | |||||||| Sbjct 813102 ATATCTGCAT 813111 >seq65 Length=771584 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 ||||| ||||| || | | ||||||||||| || ||||| || | || ||| | Sbjct 536656 CGCAATACCAAGTGCAATGTGGACTCTTTTTGGATATTGTAATCTGAAAGAGTGCGCCCA 536597 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 ||||| | ||||||||| | | |||| | |||||| || || ||||| || |||||||| Sbjct 536596 TCTTCCAACTGTTTACCAGCAAAGATCAAACGCTGCTGGTCGGGAGGGATTCCTTCTTTG 536537 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || ||| || || | | ||| | || || | | ||| ||||||| || | Sbjct 536536 TCTTGAATCTTGGCCTTAACGTTTTCTATTGTGTCTGAAGCCTCAACTTCGAGTGTGATG 536477 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||||| || || || || || | ||| |||||||| Sbjct 536476 GTTTTCCCTGTGAGCGTCTTGACGAAGATCTGCAT 536442 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 ||||| ||||| || | | ||||||||||| || ||||| || | ||| ||| | Sbjct 537340 CGCAACACCAAGTGCAGTGTGGACTCTTTTTGGATATTGTAATCTGAAAGGGTGCGCCCA 537281 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 ||||| | ||||| || | | |||| | |||||| || || ||||| || |||||||| Sbjct 537280 TCTTCCAATTGTTTGCCAGCAAAGATCAAACGCTGCTGGTCGGGAGGGATACCTTCTTTG 537221 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || ||| || || | | ||| | || || | | ||| ||||||| || | Sbjct 537220 TCTTGAATCTTGGCCTTAACGTTTTCTATTGTGTCTGAAGCCTCAACTTCGAGTGTGATG 537161 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||||| || ||||| || || | ||| |||||||| Sbjct 537160 GTTTTCCCCGTCAGCGTCTTAACGAAGATCTGCAT 537126 Score = 86.0 bits (94), Expect = 6e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 ||||| ||||| || | | |||||||| || |||||||| || | || || | Sbjct 538936 CGCAACACCAAGTGCAGTGTCGACTCTTTCTGGATGTTGTAATCTGAAAGAGTGCGACCA 538877 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 ||||| ||||||||||| | | |||| | |||||| || || ||||| || |||||||| Sbjct 538876 TCTTCCAGCTGTTTACCAGCAAAGATCAAACGCTGCTGGTCAGGAGGGATTCCTTCTTTG 538817 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || ||| || ||| | | || | || || | | ||| ||||| | || | Sbjct 538816 TCTTGAATCTTGGCTTTAACGTTCTCTATTGTGTCTGAAGCCTCAACTTCCAGGGTGATG 538757 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||||| || ||||| || || | || |||||||| Sbjct 538756 GTTTTCCCCGTCAGCGTCTTGACAAAGATCTGCAT 538722 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 ||||| ||||| || | | ||||||||||| || ||||| || | || ||| | Sbjct 536884 CGCAACACCAAGTGCAGTGTGGACTCTTTTTGGATATTGTAATCTGAAAGTGTGCGCCCA 536825 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 ||||| | ||||| || | | |||| | |||||| || || ||||| || |||||||| Sbjct 536824 TCTTCCAATTGTTTGCCAGCAAAGATCAAACGCTGCTGGTCGGGAGGGATTCCTTCTTTG 536765 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || ||| || || | | ||| | || || | | ||| ||||||| || | Sbjct 536764 TCTTGAATCTTGGCCTTAACGTTTTCTATTGTGTCTGAAGCCTCAACTTCGAGTGTGATG 536705 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||||| || || || || || | ||| |||||||| Sbjct 536704 GTTTTCCCTGTGAGCGTCTTGACGAAGATCTGCAT 536670 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476446971695760