Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Habropoda_20laboriosa_20[refseq_20GCF_5F001263275.1_202015-08-13]
27,566 sequences; 296,954,667 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq68 118 1e-21
seq65 91.5 1e-13
>seq68
Length=1848670
Score = 118 bits (130), Expect = 1e-21
Identities = 140/190 (74%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 131934 CTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAATAGA 131993
||||||||||||| || || || ||||| |||||| | |||||| || | | | |
Sbjct 812922 CTTTTTGAATGTTATAATCTGACAGAGTACGTCCATCTTCTAACTGTTTTCCAGCAAAAA 812981
Query 131994 TTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAACTGTT 132053
| ||||| || ||||| || || || ||||||||||| ||||||| ||||| | ||
Sbjct 812982 TGAGACGTTGCTGATCGGGTGGAATTCCTTCTTTATCCTGAATTTTTGCTTTCACATTTT 813041
Query 132054 CCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTATGA 132113
| | |||||| | | |||||||| | || | |||||||| |||| |||||| | ||
Sbjct 813042 CAATAGTATCCGATGCTTCCACTTCAAGGGTAATGGTTTTACCCGTCAAAGTTTTCACGA 813101
Query 132114 AAATCTGCAT 132123
| ||||||||
Sbjct 813102 ATATCTGCAT 813111
>seq65
Length=771584
Score = 91.5 bits (100), Expect = 1e-13
Identities = 149/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968
||||| ||||| || | | ||||||||||| || ||||| || | || ||| |
Sbjct 536656 CGCAATACCAAGTGCAATGTGGACTCTTTTTGGATATTGTAATCTGAAAGAGTGCGCCCA 536597
Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028
||||| | ||||||||| | | |||| | |||||| || || ||||| || ||||||||
Sbjct 536596 TCTTCCAACTGTTTACCAGCAAAGATCAAACGCTGCTGGTCGGGAGGGATTCCTTCTTTG 536537
Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088
|| ||| || || | | ||| | || || | | ||| ||||||| || |
Sbjct 536536 TCTTGAATCTTGGCCTTAACGTTTTCTATTGTGTCTGAAGCCTCAACTTCGAGTGTGATG 536477
Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
||||| || || || || || | ||| ||||||||
Sbjct 536476 GTTTTCCCTGTGAGCGTCTTGACGAAGATCTGCAT 536442
Score = 91.5 bits (100), Expect = 1e-13
Identities = 149/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968
||||| ||||| || | | ||||||||||| || ||||| || | ||| ||| |
Sbjct 537340 CGCAACACCAAGTGCAGTGTGGACTCTTTTTGGATATTGTAATCTGAAAGGGTGCGCCCA 537281
Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028
||||| | ||||| || | | |||| | |||||| || || ||||| || ||||||||
Sbjct 537280 TCTTCCAATTGTTTGCCAGCAAAGATCAAACGCTGCTGGTCGGGAGGGATACCTTCTTTG 537221
Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088
|| ||| || || | | ||| | || || | | ||| ||||||| || |
Sbjct 537220 TCTTGAATCTTGGCCTTAACGTTTTCTATTGTGTCTGAAGCCTCAACTTCGAGTGTGATG 537161
Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
||||| || ||||| || || | ||| ||||||||
Sbjct 537160 GTTTTCCCCGTCAGCGTCTTAACGAAGATCTGCAT 537126
Score = 86.0 bits (94), Expect = 6e-12
Identities = 148/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968
||||| ||||| || | | |||||||| || |||||||| || | || || |
Sbjct 538936 CGCAACACCAAGTGCAGTGTCGACTCTTTCTGGATGTTGTAATCTGAAAGAGTGCGACCA 538877
Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028
||||| ||||||||||| | | |||| | |||||| || || ||||| || ||||||||
Sbjct 538876 TCTTCCAGCTGTTTACCAGCAAAGATCAAACGCTGCTGGTCAGGAGGGATTCCTTCTTTG 538817
Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088
|| ||| || ||| | | || | || || | | ||| ||||| | || |
Sbjct 538816 TCTTGAATCTTGGCTTTAACGTTCTCTATTGTGTCTGAAGCCTCAACTTCCAGGGTGATG 538757
Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
||||| || ||||| || || | || ||||||||
Sbjct 538756 GTTTTCCCCGTCAGCGTCTTGACAAAGATCTGCAT 538722
Score = 82.4 bits (90), Expect = 7e-11
Identities = 147/215 (68%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968
||||| ||||| || | | ||||||||||| || ||||| || | || ||| |
Sbjct 536884 CGCAACACCAAGTGCAGTGTGGACTCTTTTTGGATATTGTAATCTGAAAGTGTGCGCCCA 536825
Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028
||||| | ||||| || | | |||| | |||||| || || ||||| || ||||||||
Sbjct 536824 TCTTCCAATTGTTTGCCAGCAAAGATCAAACGCTGCTGGTCGGGAGGGATTCCTTCTTTG 536765
Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088
|| ||| || || | | ||| | || || | | ||| ||||||| || |
Sbjct 536764 TCTTGAATCTTGGCCTTAACGTTTTCTATTGTGTCTGAAGCCTCAACTTCGAGTGTGATG 536705
Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
||||| || || || || || | ||| ||||||||
Sbjct 536704 GTTTTCCCTGTGAGCGTCTTGACGAAGATCTGCAT 536670
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476446971695760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |