Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Habropoda_20laboriosa_20[refseq_20GCF_5F001263275.1_202015-08-13]
27,566 sequences; 296,954,667 total letters
Query= NC_026268.1
Length=139132
Score E
Sequences producing significant alignments: (Bits) Value
seq49 127 2e-24
seq284 96.9 3e-15
seq68 96.9 3e-15
>seq49
Length=1886280
Score = 127 bits (140), Expect = 2e-24
Identities = 166/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 25174 CATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAA 25233
|||||| | ||||| || ||||| || || ||| | || || |||| || |||||
Sbjct 1163142 CATGCAGATCTTTGTCAAGACATTGACTGGCAAAACAATAACCCTCGAGGTTGAAGCATC 1163083
Query 25234 CGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCA 25293
|||||| || || | || || ||||||| || || ||||| || || || |||||
Sbjct 1163082 CGATACAATTGAAAATGTGAAGGCAAAAATTCAGGACAAGGAGGGAATTCCCCCAGATCA 1163023
Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAA 25353
||||||| | |||| | ||||||||||| ||||||| |||| || ||||||||
Sbjct 1163022 GCAAAGATTGATTTTTGCTGGCAAACAACTTGAAGATGGAAGAACACTCTCTGATTACAA 1162963
Query 25354 TATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGGAA 25403
||||||||||| || || |||| | || | |||||||||| ||||
Sbjct 1162962 CATTCAAAAAGAGTCAACACTTCACCTTGTACTTCGATTGAGAGGTGGAA 1162913
Score = 107 bits (118), Expect = 2e-18
Identities = 142/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
|||||| | || || || || | || ||||| ||||||| | ||||| |||||
Sbjct 1162913 ATGCAAATTTTCGTCAAGACCCTTACGGGAAAGACGATCACTTTAGAAGTTGAAGCTTCA 1162854
Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294
||||| ||||| | || ||| ||||||| ||||| |||||||| || || || ||
Sbjct 1162853 GATACCATCGAAAATGTTAAAGCAAAAATTCAAGATAAGGAGGGTATTCCACCAGACCAA 1162794
Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354
|| ||| | |||| || || || ||||| ||||||| | | || |||||||||
Sbjct 1162793 CAGAGATTGATTTTCGCTGGTAAGCAACTTGAAGATGGACGCACACTCTCTGATTACAAT 1162734
Query 25355 ATTCAAAAAGAATCCAC 25371
|||||||||||||| ||
Sbjct 1162733 ATTCAAAAAGAATCAAC 1162717
Score = 93.3 bits (102), Expect = 4e-14
Identities = 158/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
|||||| | || || ||||| | || ||||| ||||||| | ||||| |||||
Sbjct 1161099 ATGCAAATTTTCGTCAAAACCCTTACTGGAAAGACGATCACTTTAGAAGTTGAAGCTTCA 1161040
Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294
||||| || || | || ||| |||||| ||||| ||||| || || || ||||||
Sbjct 1161039 GATACCATTGAAAATGTTAAAGCAAAAATCCAAGATAAGGAGGGCATTCCCCCAGATCAG 1160980
Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354
|||||| | |||| || || || || || ||||| | | | | || || |||
Sbjct 1160979 CAAAGATTGATTTTCGCTGGTAAGCAGCTTGAAGACGGACGCACACTTGCAGACTATAAT 1160920
Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGGAA 25403
||||| || ||||| || | ||| | || | |||||||||| ||||
Sbjct 1160919 ATTCAGAAGGAATCAACTCTCCATCTTGTACTTCGATTGAGAGGTGGAA 1160871
Score = 89.7 bits (98), Expect = 5e-13
Identities = 157/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
|||||| | || || ||||| | || |||||| | || || | ||||| |||||
Sbjct 1161327 ATGCAAATTTTCGTCAAAACCCTTACTGGAAAAACTATTACTTTAGAAGTTGAAGCTTCT 1161268
Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294
||||| || ||| | || || ||||||| || || ||||| || || || ||||||
Sbjct 1161267 GATACGATTGAGAATGTGAAGGCAAAAATTCAGGACAAGGAGGGCATTCCCCCAGATCAG 1161208
Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354
|||||| | |||| || || || ||||| ||||||| | | | || || |||
Sbjct 1161207 CAAAGATTGATTTTCGCTGGTAAGCAACTTGAAGATGGACGCACACTTTCTGACTATAAT 1161148
Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGGAA 25403
|||||||| || || || | ||| | || | || | |||||||||
Sbjct 1161147 ATTCAAAAGGAGTCAACTCTCCATCTTGTACTTCGACTCCGAGGAGGAA 1161099
>seq284
Length=1419496
Score = 96.9 bits (106), Expect = 3e-15
Identities = 99/127 (78%), Gaps = 2/127 (2%)
Strand=Plus/Minus
Query 110135 CCCAATTCGAATAGCAATCGATCCGCCACAAATTCAATATACTCGCACATGGACTGTAC- 110193
|| ||||| | ||||||| ||||| |||||||||||||| | ||||||| | | |||
Sbjct 890869 CCTAATTCTACAAGCAATCTGTCCGCAACAAATTCAATATATTGGCACATG-AGTTTACA 890811
Query 110194 GTTCATGCCTAACATGGCAACTGGTAGAGCGGTAGTaaaaaaaTCCTTTTCAATGTCGAC 110253
||||||||||| ||| |||| |||| |||| ||| ||||| || | |||||| | |||
Sbjct 890810 GTTCATGCCTATCATTTCAACGGGTAAAGCGTCAGTTAAAAATTCTTGTTCAATTTGGAC 890751
Query 110254 AGCCTCT 110260
|| |||
Sbjct 890750 CGCGTCT 890744
>seq68
Length=1848670
Score = 96.9 bits (106), Expect = 3e-15
Identities = 140/196 (71%), Gaps = 4/196 (2%)
Strand=Plus/Minus
Query 25171 CAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGC 25230
||| ||||| | || || ||||| || || || ||| | || || | ||||| |||||
Sbjct 813115 CAAAATGCAGATATTCGTGAAAACTTTGACGGGTAAAACCATTACCCTTGAAGTGGAAGC 813056
Query 25231 CAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGA 25290
|||||||| || | || ||| ||||||| |||||||| || || || |||||
Sbjct 813055 ATCGGATACTATTGAAAATGTGAAAGCAAAAATTCAGGATAAAGAAGGAATTCCACCCGA 812996
Query 25291 TCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAA--ATGTCAGCGAT 25348
||||||| | ||||||| | || ||||| | ||||||| | | ||||| |||
Sbjct 812995 TCAGCAACGTCTCATTTTTGCTGGAAAACAGTTAGAAGATGGACGTACTCTGTCA--GAT 812938
Query 25349 TACAATATTCAAAAAG 25364
|| || ||||||||||
Sbjct 812937 TATAACATTCAAAAAG 812922
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 444941031597120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |