Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Habropoda_20laboriosa_20[refseq_20GCF_5F001263275.1_202015-08-13]
27,566 sequences; 296,954,667 total letters
Query= NC_026430.1
Length=125767
Score E
Sequences producing significant alignments: (Bits) Value
seq49 96.9 3e-15
seq394 86.0 5e-12
>seq49
Length=1886280
Score = 96.9 bits (106), Expect = 3e-15
Identities = 143/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319
||||| || ||||| || |||||||||||||| || || ||| | || ||| | |
Sbjct 1163141 ATGCAGATCTTTGTCAAGACATTGACTGGCAAAACAATAACCCTCGAGGTTGAAGCATCC 1163082
Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379
||| | ||| | ||||| ||||||| ||||| || || | ||| |||||
Sbjct 1163081 GATACAATTGAAAATGTGAAGGCAAAAATTCAGGACAAGGAGGGAATTCCCCCAGATCAG 1163022
Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439
||||| | |||| ||| ||||||||| | |||||| | ||| | |||||||||
Sbjct 1163021 CAAAGATTGATTTTTGCTGGCAAACAACTTGAAGATGGAAGAACACTCTCTGATTACAAC 1162962
Query 106440 ATACAAAAAGAATCTACACTACA 106462
|| |||||||| || ||||| ||
Sbjct 1162961 ATTCAAAAAGAGTCAACACTTCA 1162939
>seq394
Length=4544675
Score = 86.0 bits (94), Expect = 5e-12
Identities = 88/115 (77%), Gaps = 0/115 (0%)
Strand=Plus/Plus
Query 106373 TGATCAACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGA 106432
|||||| || || | || | ||| |||||||||||||||||| || |||| | ||
Sbjct 4399694 TGATCAGCAGAGATTAATCTTTGCTGGCAAACAATTAGAAGATGGTAGAACTTTATCAGA 4399753
Query 106433 TTACAACATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGGA 106487
||| ||||| || || ||||||||| ||||||| ||||| | ||| |||| |||
Sbjct 4399754 TTATAACATTCAGAAGGAATCTACATTACATTTGGTATTACGTTTAAGAGGTGGA 4399808
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 402194433096128
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |