Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Habropoda_20laboriosa_20[refseq_20GCF_5F001263275.1_202015-08-13] 27,566 sequences; 296,954,667 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq59 181 1e-40 seq284 134 2e-26 >seq59 Length=4191719 Score = 181 bits (200), Expect = 1e-40 Identities = 213/288 (74%), Gaps = 0/288 (0%) Strand=Plus/Minus Query 68643 TATAATTATATTCTTGATCTCATCATTCCACAATTTTCTCTCCGTTAAAACTCTAAGGAG 68702 ||||||| ||| || || || | || ||| | | ||| || || | | | | | | Sbjct 764787 TATAATTTCATTTTTCATGTCCTGATCCCAAAGATCTCTTTCAGTAAGATCCCGTAACAA 764728 Query 68703 ATGCGGATTAACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGT 68762 ||| |||||||| | |||||| || ||||| || ||||| | || ||||||||| | || Sbjct 764727 ATGAGGATTAACAACTTGAAACTCTCCAGACAAAACTCTTCTTGTATAAATATTATTAGT 764668 Query 68763 ATATGGTTCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGG 68822 ||| ||||| | || ||||||||||| | |||||| ||||| ||||| ||||||||||| Sbjct 764667 ATAGGGTTCTATGGACTCATTATTTCCTAAAATTTGCGCAGTAGATGCTGTTGGCATAGG 764608 Query 68823 TGCCACCAATAAACTATTTCTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTTCCA 68882 ||| | || ||| |||||||| |||||| | ||||| || |||| | ||| Sbjct 764607 TGCAATTAACAAAGAATTTCTAACTCCATGTTTAGCAATTTTTTCCTTTAAAGCAGCCCA 764548 Query 68883 ATCCCAAAGATCAGATGGTACAACATTCCAAAGATCGTATTGTAGAAT 68930 |||||| | ||||| |||| ||||||||| | ||||||||||| ||| Sbjct 764547 ATCCCATAAATCAGTTGGTGTAACATTCCACATATCGTATTGTAAAAT 764500 Score = 147 bits (162), Expect = 3e-30 Identities = 219/311 (70%), Gaps = 0/311 (0%) Strand=Plus/Minus Query 69661 TTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGA 69720 || || |||||||||||||| || | ||| || | ||| || | |||||||||||||| | Sbjct 763288 TTACCAGTATTTTTTTTAAGGTCCAAAAATTCAAAAATGTCTGCATGCCATGGTTCTAAA 763229 Query 69721 TATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTA 69780 |||| || | |||| |||| |||||| ||||| ||||| | |||| ||||| ||| Sbjct 763228 TATAGGGCAAATGCTCCTGGTCTTTTATTCCCTCCTTGATCAACATATCGAGCAGTATTA 763169 Query 69781 TTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAA 69840 ||||| ||||| | ||| |||| | |||||||||| |||| ||| ||| || Sbjct 763168 TTATATACTCTAATCATTGGAACTAAACCATTAGATACACCAAATGTACCACCTATTGGT 763109 Query 69841 CTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATT 69900 | ||| |||| |||||| | || || || || || || || ||| ||| Sbjct 763108 GTACCTTTTGCTCGAATACAATGTATGTTAAGTCCAATACCACCAGCAGATTTGCTAATT 763049 Query 69901 AGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGA 69960 || ||||| | || ||||| ||||| || || || |||||||| |||| | || Sbjct 763048 AGTGCACATCTCTTTAATGTATCATAAATTCCTTCAATGCTATCTGAACTCATTGTTAGT 762989 Query 69961 AGAAAACAGCT 69971 |||||||| || Sbjct 762988 AGAAAACAACT 762978 Score = 132 bits (146), Expect = 7e-26 Identities = 133/169 (79%), Gaps = 4/169 (2%) Strand=Plus/Minus Query 69501 TTGTGTATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATT 69560 ||||||| | || ||| |||||||| |||||||||||||| || |||||| |||| | Sbjct 763517 TTGTGTAAAGTGC--TTCAAATTCATCACCCCAAACATCATCTAAACCAGGAGATTCGTG 763460 Query 69561 TGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAAT 69620 ||| ||||| || | ||| | | ||| ||| ||||||||||||||| ||||| ||||| Sbjct 763459 TGGGCACATTAAAGTCCAAATACCATTTTCCAAAACTCGTTTCATAAAAAGATCAGGAAT 763400 Query 69621 CCAAAGAGCTATA-AAGAGATCTCTGGTTCTATTTTCTTCATTTCCTGT 69668 ||| | ||| ||| || | ||||| | |||||||||||| || ||||| Sbjct 763399 CCATAAAGC-ATAGAATAATTCTCTTGCTCTATTTTCTTCTTTACCTGT 763352 >seq284 Length=1419496 Score = 134 bits (148), Expect = 2e-26 Identities = 160/217 (74%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 39877 ATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGAATGGATGTTTTCAATCGC 39936 |||| || ||||||||| ||||||| | ||||||||||| || | ||||| || || Sbjct 890242 ATCTGCAATATATGTATCGATTAACAAAGAGTACATTTCTGAGTGCACATTTTCCATTGC 890183 Query 39937 CATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTACCTCTGAACAAAATCTTTC 39996 | ||||| || ||||| || | ||| || || ||||| ||||| | ||||| ||| Sbjct 890182 AACTTGAAAGCCATAAAAGCAACGTGCCTCTGTTATTTGCACCTCCTGGCTAAATCGTTC 890123 Query 39997 CGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAATGCCAATACATGTTTAAT 40056 | | ||||||||| || ||||||||| ||| ||||||||||| ||||||||| || Sbjct 890122 AACAAGATTTTCATTGACAATTCCATCAGAAGCAGCAAAAAATGCTAATACATGTGATAT 890063 Query 40057 AAAATATTTTTCATCGGGTGTCAATTTATTCCAGTCA 40093 ||| | ||| ||| | || || | ||||||||| Sbjct 890062 AAATTTTTTCTCACTGATAGTTAAACTGTTCCAGTCA 890026 Score = 111 bits (122), Expect = 2e-19 Identities = 159/221 (72%), Gaps = 5/221 (2%) Strand=Plus/Minus Query 39639 CCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTT 39698 ||||||||||| ||| | ||| ||| ||||| || || ||||| || || | ||| | Sbjct 890558 CCTCATCTCTAGAAATGAGTTCATTACTGAATGTAAGGCCTGGCATAAGTCCTCTCTTCT 890499 Query 39699 TGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATG 39758 | | |||||| |||||||||||| ||| |||||| || ||||| ||||| ||||||| Sbjct 890498 TTAACCAAAAAATGGCAGCAAAACTACCACTAAAGAAAATACCTTCCACTGCAGCAAATG 890439 Query 39759 CA---ACAAG-TCTCTCTCCGTAACTTGTATCATTATGTATCCACTTCTGTGCCCAATCA 39814 || ||| | || ||| | || |||| || |||||| || |||||||| | Sbjct 890438 CAATTACACGTTCGGGAAAGGTAGC-AGTTTCATGATTTATCCAATTTAATGCCCAATTA 890380 Query 39815 GCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAA 39855 ||||| || ||||| |||| |||| || |||||||| Sbjct 890379 GCTTTTCTCGCAACACACGGCAAATTTTCAATCGCATTAAA 890339 Score = 102 bits (112), Expect = 1e-16 Identities = 149/211 (71%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 39431 CCTAATTCTGAAATCAATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAA 39490 ||||||||| || |||||| || ||||||||||| || ||| ||| | || ||| Sbjct 890869 CCTAATTCTACAAGCAATCTGTCCGCAACAAATTCAATATATTGGCACATGAGTTTACAG 890810 Query 39491 TTCATTCCTATGAGTTTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACG 39550 ||||| ||||| | || ||| |||| ||| || |||| ||| |||| ||| || | || Sbjct 890809 TTCATGCCTATCATTTCAACGGGTAAAGCGTCAGTTAAAAATTCTTGTTCAATTTGGACC 890750 Query 39551 GCCTCTGTTATTATCGATGTTACTACCTCATCACTCGGTGGATGCAATAAATGTTTAAAC 39610 || ||| | || || ||||| || |||| ||| || | | ||||||||| Sbjct 890749 GCGTCTTTAATAATTGATGTGACGCGTTCATTCGAAGGTTTCTGTATGATGTGTTTAAAC 890690 Query 39611 ATTAAGCAGGCGAAGTCACAATGTAGGCCCT 39641 |||||||| || || || ||||| | |||| Sbjct 890689 ATTAAGCATGCAAAATCGCAATGCAATCCCT 890659 Score = 98.7 bits (108), Expect = 1e-15 Identities = 106/138 (77%), Gaps = 3/138 (2%) Strand=Plus/Minus Query 39271 TTAAAAGTCAACATCTAAAGAAAAATGATTATCT-TCTTGT--GACATAACTCCCATTTT 39327 |||||||||| ||| | | ||||| | ||| | |||| | ||| |||||| ||| Sbjct 891104 TTAAAAGTCAGCATTAACTGTAAAATTGCTCTCTATTTTGTTTGCCATCACTCCCCATTT 891045 Query 39328 TTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTC 39387 ||| ||||| ||||| |||||||||||| || || || |||||||| || |||| ||| Sbjct 891044 TTGATATTCTCCAACTTTTTTCTCGAAAAAGTTCGTCTTACCTTCCAAAGAAATATGTTC 890985 Query 39388 CATGAAATCAAACGGATT 39405 ||||||||| || ||||| Sbjct 890984 CATGAAATCGAATGGATT 890967 Score = 95.1 bits (104), Expect = 2e-14 Identities = 81/100 (81%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 40112 TCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTACATGTTCCATATATCA 40171 |||||||| || |||||||||| || || ||||| ||||||||||| | ||| || ||| Sbjct 889919 TCTACTTCCTCCACTGTCCAAAAGGAGGCTTCTGCTTTTTTGTACATTTGCCAAATGTCA 889860 Query 40172 CGATATTGTATTGGAAAAATAACAAATCTATTTGGATTTT 40211 | |||| || ||||||| |||||||||| |||||||| Sbjct 889859 GGCCATTGGATAGGAAAAACAACAAATCTACGTGGATTTT 889820 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686672108400240