Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Habropoda_20laboriosa_20[refseq_20GCF_5F001263275.1_202015-08-13]
27,566 sequences; 296,954,667 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq59 181 1e-40
seq284 134 2e-26
>seq59
Length=4191719
Score = 181 bits (200), Expect = 1e-40
Identities = 213/288 (74%), Gaps = 0/288 (0%)
Strand=Plus/Minus
Query 68643 TATAATTATATTCTTGATCTCATCATTCCACAATTTTCTCTCCGTTAAAACTCTAAGGAG 68702
||||||| ||| || || || | || ||| | | ||| || || | | | | | |
Sbjct 764787 TATAATTTCATTTTTCATGTCCTGATCCCAAAGATCTCTTTCAGTAAGATCCCGTAACAA 764728
Query 68703 ATGCGGATTAACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGT 68762
||| |||||||| | |||||| || ||||| || ||||| | || ||||||||| | ||
Sbjct 764727 ATGAGGATTAACAACTTGAAACTCTCCAGACAAAACTCTTCTTGTATAAATATTATTAGT 764668
Query 68763 ATATGGTTCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGG 68822
||| ||||| | || ||||||||||| | |||||| ||||| ||||| |||||||||||
Sbjct 764667 ATAGGGTTCTATGGACTCATTATTTCCTAAAATTTGCGCAGTAGATGCTGTTGGCATAGG 764608
Query 68823 TGCCACCAATAAACTATTTCTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTTCCA 68882
||| | || ||| |||||||| |||||| | ||||| || |||| | |||
Sbjct 764607 TGCAATTAACAAAGAATTTCTAACTCCATGTTTAGCAATTTTTTCCTTTAAAGCAGCCCA 764548
Query 68883 ATCCCAAAGATCAGATGGTACAACATTCCAAAGATCGTATTGTAGAAT 68930
|||||| | ||||| |||| ||||||||| | ||||||||||| |||
Sbjct 764547 ATCCCATAAATCAGTTGGTGTAACATTCCACATATCGTATTGTAAAAT 764500
Score = 147 bits (162), Expect = 3e-30
Identities = 219/311 (70%), Gaps = 0/311 (0%)
Strand=Plus/Minus
Query 69661 TTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGA 69720
|| || |||||||||||||| || | ||| || | ||| || | |||||||||||||| |
Sbjct 763288 TTACCAGTATTTTTTTTAAGGTCCAAAAATTCAAAAATGTCTGCATGCCATGGTTCTAAA 763229
Query 69721 TATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTA 69780
|||| || | |||| |||| |||||| ||||| ||||| | |||| ||||| |||
Sbjct 763228 TATAGGGCAAATGCTCCTGGTCTTTTATTCCCTCCTTGATCAACATATCGAGCAGTATTA 763169
Query 69781 TTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAA 69840
||||| ||||| | ||| |||| | |||||||||| |||| ||| ||| ||
Sbjct 763168 TTATATACTCTAATCATTGGAACTAAACCATTAGATACACCAAATGTACCACCTATTGGT 763109
Query 69841 CTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATT 69900
| ||| |||| |||||| | || || || || || || || ||| |||
Sbjct 763108 GTACCTTTTGCTCGAATACAATGTATGTTAAGTCCAATACCACCAGCAGATTTGCTAATT 763049
Query 69901 AGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGA 69960
|| ||||| | || ||||| ||||| || || || |||||||| |||| | ||
Sbjct 763048 AGTGCACATCTCTTTAATGTATCATAAATTCCTTCAATGCTATCTGAACTCATTGTTAGT 762989
Query 69961 AGAAAACAGCT 69971
|||||||| ||
Sbjct 762988 AGAAAACAACT 762978
Score = 132 bits (146), Expect = 7e-26
Identities = 133/169 (79%), Gaps = 4/169 (2%)
Strand=Plus/Minus
Query 69501 TTGTGTATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATT 69560
||||||| | || ||| |||||||| |||||||||||||| || |||||| |||| |
Sbjct 763517 TTGTGTAAAGTGC--TTCAAATTCATCACCCCAAACATCATCTAAACCAGGAGATTCGTG 763460
Query 69561 TGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAAT 69620
||| ||||| || | ||| | | ||| ||| ||||||||||||||| ||||| |||||
Sbjct 763459 TGGGCACATTAAAGTCCAAATACCATTTTCCAAAACTCGTTTCATAAAAAGATCAGGAAT 763400
Query 69621 CCAAAGAGCTATA-AAGAGATCTCTGGTTCTATTTTCTTCATTTCCTGT 69668
||| | ||| ||| || | ||||| | |||||||||||| || |||||
Sbjct 763399 CCATAAAGC-ATAGAATAATTCTCTTGCTCTATTTTCTTCTTTACCTGT 763352
>seq284
Length=1419496
Score = 134 bits (148), Expect = 2e-26
Identities = 160/217 (74%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 39877 ATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGAATGGATGTTTTCAATCGC 39936
|||| || ||||||||| ||||||| | ||||||||||| || | ||||| || ||
Sbjct 890242 ATCTGCAATATATGTATCGATTAACAAAGAGTACATTTCTGAGTGCACATTTTCCATTGC 890183
Query 39937 CATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTACCTCTGAACAAAATCTTTC 39996
| ||||| || ||||| || | ||| || || ||||| ||||| | ||||| |||
Sbjct 890182 AACTTGAAAGCCATAAAAGCAACGTGCCTCTGTTATTTGCACCTCCTGGCTAAATCGTTC 890123
Query 39997 CGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAATGCCAATACATGTTTAAT 40056
| | ||||||||| || ||||||||| ||| ||||||||||| ||||||||| ||
Sbjct 890122 AACAAGATTTTCATTGACAATTCCATCAGAAGCAGCAAAAAATGCTAATACATGTGATAT 890063
Query 40057 AAAATATTTTTCATCGGGTGTCAATTTATTCCAGTCA 40093
||| | ||| ||| | || || | |||||||||
Sbjct 890062 AAATTTTTTCTCACTGATAGTTAAACTGTTCCAGTCA 890026
Score = 111 bits (122), Expect = 2e-19
Identities = 159/221 (72%), Gaps = 5/221 (2%)
Strand=Plus/Minus
Query 39639 CCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTT 39698
||||||||||| ||| | ||| ||| ||||| || || ||||| || || | ||| |
Sbjct 890558 CCTCATCTCTAGAAATGAGTTCATTACTGAATGTAAGGCCTGGCATAAGTCCTCTCTTCT 890499
Query 39699 TGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATG 39758
| | |||||| |||||||||||| ||| |||||| || ||||| ||||| |||||||
Sbjct 890498 TTAACCAAAAAATGGCAGCAAAACTACCACTAAAGAAAATACCTTCCACTGCAGCAAATG 890439
Query 39759 CA---ACAAG-TCTCTCTCCGTAACTTGTATCATTATGTATCCACTTCTGTGCCCAATCA 39814
|| ||| | || ||| | || |||| || |||||| || |||||||| |
Sbjct 890438 CAATTACACGTTCGGGAAAGGTAGC-AGTTTCATGATTTATCCAATTTAATGCCCAATTA 890380
Query 39815 GCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAA 39855
||||| || ||||| |||| |||| || ||||||||
Sbjct 890379 GCTTTTCTCGCAACACACGGCAAATTTTCAATCGCATTAAA 890339
Score = 102 bits (112), Expect = 1e-16
Identities = 149/211 (71%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 39431 CCTAATTCTGAAATCAATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAA 39490
||||||||| || |||||| || ||||||||||| || ||| ||| | || |||
Sbjct 890869 CCTAATTCTACAAGCAATCTGTCCGCAACAAATTCAATATATTGGCACATGAGTTTACAG 890810
Query 39491 TTCATTCCTATGAGTTTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACG 39550
||||| ||||| | || ||| |||| ||| || |||| ||| |||| ||| || | ||
Sbjct 890809 TTCATGCCTATCATTTCAACGGGTAAAGCGTCAGTTAAAAATTCTTGTTCAATTTGGACC 890750
Query 39551 GCCTCTGTTATTATCGATGTTACTACCTCATCACTCGGTGGATGCAATAAATGTTTAAAC 39610
|| ||| | || || ||||| || |||| ||| || | | |||||||||
Sbjct 890749 GCGTCTTTAATAATTGATGTGACGCGTTCATTCGAAGGTTTCTGTATGATGTGTTTAAAC 890690
Query 39611 ATTAAGCAGGCGAAGTCACAATGTAGGCCCT 39641
|||||||| || || || ||||| | ||||
Sbjct 890689 ATTAAGCATGCAAAATCGCAATGCAATCCCT 890659
Score = 98.7 bits (108), Expect = 1e-15
Identities = 106/138 (77%), Gaps = 3/138 (2%)
Strand=Plus/Minus
Query 39271 TTAAAAGTCAACATCTAAAGAAAAATGATTATCT-TCTTGT--GACATAACTCCCATTTT 39327
|||||||||| ||| | | ||||| | ||| | |||| | ||| |||||| |||
Sbjct 891104 TTAAAAGTCAGCATTAACTGTAAAATTGCTCTCTATTTTGTTTGCCATCACTCCCCATTT 891045
Query 39328 TTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTC 39387
||| ||||| ||||| |||||||||||| || || || |||||||| || |||| |||
Sbjct 891044 TTGATATTCTCCAACTTTTTTCTCGAAAAAGTTCGTCTTACCTTCCAAAGAAATATGTTC 890985
Query 39388 CATGAAATCAAACGGATT 39405
||||||||| || |||||
Sbjct 890984 CATGAAATCGAATGGATT 890967
Score = 95.1 bits (104), Expect = 2e-14
Identities = 81/100 (81%), Gaps = 0/100 (0%)
Strand=Plus/Minus
Query 40112 TCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTACATGTTCCATATATCA 40171
|||||||| || |||||||||| || || ||||| ||||||||||| | ||| || |||
Sbjct 889919 TCTACTTCCTCCACTGTCCAAAAGGAGGCTTCTGCTTTTTTGTACATTTGCCAAATGTCA 889860
Query 40172 CGATATTGTATTGGAAAAATAACAAATCTATTTGGATTTT 40211
| |||| || ||||||| |||||||||| ||||||||
Sbjct 889859 GGCCATTGGATAGGAAAAACAACAAATCTACGTGGATTTT 889820
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686672108400240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |