Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Habropoda_20laboriosa_20[refseq_20GCF_5F001263275.1_202015-08-13] 27,566 sequences; 296,954,667 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq65 116 3e-21 seq49 98.7 8e-16 seq59 96.9 3e-15 >seq65 Length=771584 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 ||||| || | ||||||||||| || || || || |||||||| |||||||| || Sbjct 536668 CCTCCCCGGAGTCGCAATACCAAGTGCAATGTGGACTCTTTTTGGATATTGTAATCTGAA 536609 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | ||||| | ||||| | ||||||||| || | || | |||||| || || || || Sbjct 536608 AGAGTGCGCCCATCTTCCAACTGTTTACCAGCAAAGATCAAACGCTGCTGGTCGGGAGGG 536549 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | || ||||| || |||||| || | | |||||| ||||||| || |||||| Sbjct 536548 ATTCCTTCTTTGTCTTGAATCTTGGCCTTAACGTTTTCTATTGTGTCTGAAGCCTCAACT 536489 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || || | ||| || || || || || || ||||| ||||| Sbjct 536488 TCGAGTGTGATGGTTTTCCCTGTGAGCGTCTTGACGAAGATCTGCAT 536442 Score = 114 bits (126), Expect = 1e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 27017 ATTGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC 27076 ||| ||||| || | ||||| ||||| || | || || ||||| || || ||||| || Sbjct 538952 ATTTCCTCCTCGGAGTCGCAACACCAAGTGCAGTGTCGACTCTTTCTGGATGTTGTAATC 538893 Query 27077 GCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGG 27136 | |||| | ||||| ||||||||||| || | || | |||||| || || || Sbjct 538892 TGAAAGAGTGCGACCATCTTCCAGCTGTTTACCAGCAAAGATCAAACGCTGCTGGTCAGG 538833 Query 27137 CGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTC 27196 || | || ||||| || |||||| ||| | | | |||| ||||||| || || Sbjct 538832 AGGGATTCCTTCTTTGTCTTGAATCTTGGCTTTAACGTTCTCTATTGTGTCTGAAGCCTC 538773 Query 27197 AACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 |||||| || || || | ||| |||||||| || || |||||||| ||||| Sbjct 538772 AACTTCCAGGGTGATGGTTTTCCCCGTCAGCGTCTTGACAAAGATCTGCAT 538722 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 ||||| || | ||||||||||| || | || || |||||||| |||||||| || Sbjct 536440 CCTCCTCGGAGTCGCAATACCAAGTGCAGTGTGGACTCTTTTTGGATATTGTAATCTGAA 536381 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | |||| | ||||| | |||||| || || | || | |||||| || || || || Sbjct 536380 AGAGTGCGACCATCTTCCAACTGTTTCCCAGCAAAGATCAAACGCTGCTGGTCGGGAGGG 536321 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | || ||||| || ||||||| |||| | |||| ||||||| |||||| || Sbjct 536320 ATTCCTTCTTTGTCTTGGATCTTGGCCTTCACATTCTCTATTGTGTCTGAGGCTTCTACC 536261 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || | || || | ||| || || || ||||| || ||||| |||||| Sbjct 536260 TCCAAGGTGATGGTTTTACCTGTGAGGGTTTTGACGAAGATCTGCATA 536213 >seq49 Length=1886280 Score = 98.7 bits (108), Expect = 8e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || | ||| || | ||| | ||| | || || || || |||||||| ||||| | Sbjct 1160873 CCACCTCTCAATCGAAGTACAAGATGGAGAGTTGATTCCTTCTGAATATTATAGTCTG-C 1160931 Query 27081 ATGT-TGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 | || |||| ||||||| ||||| ||||| ||| |||| | | || ||||| || || Sbjct 1160932 AAGTGTGCGTCCGTCTTCAAGCTGCTTACCAGCGAAAATCAATCTTTGCTGATCTGGGGG 1160991 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | ||||| ||||| ||| || ||| | |||| | || |||| |||||||| Sbjct 1160992 AATGCCCTCCTTATCTTGGATTTTTGCTTTAACATTTTCAATGGTATCTGAAGCTTCAAC 1161051 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 ||||| ||| || | || || || || ||||| || || |||||||| Sbjct 1161052 TTCTAAAGTGATCGTCTTTCCAGTAAGGGTTTTGACGAAAATTTGCAT 1161099 Score = 95.1 bits (104), Expect = 1e-14 Identities = 152/216 (70%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGT-TGCGCTC 27091 |||| || | ||| | || || || || |||||||| ||||| || || |||| | Sbjct 1162015 CGCAGAACAAGATGAAGAGTTGATTCCTTCTGAATATTATAGTCTG-CAAGTGTGCGTCC 1162073 Query 27092 GTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTT 27151 |||||| ||||| ||||| ||| |||| | | ||||||||| || || | ||| || || Sbjct 1162074 GTCTTCAAGCTGCTTACCAGCGAAAATCAATCTCTGTTGATCAGGTGGAATACCTTCCTT 1162133 Query 27152 ATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTAT 27211 || || || |||| | || | || || | ||||||||||||| ||| || Sbjct 1162134 GTCCTGAATTTTTGCCTTCACATTCTCAATTGTATCAGAAGCTTCAACTTCTAAAGTGAT 1162193 Query 27212 AGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | || ||||| |||||||| || || |||||||| Sbjct 1162194 TGTCTTTCCCGTGAGAGTTTTAACGAAAATTTGCAT 1162229 Score = 95.1 bits (104), Expect = 1e-14 Identities = 149/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 27038 TACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGT-TGCGCTCGTCTT 27096 ||| | ||| | || || || || |||||||| ||||| || || |||| |||||| Sbjct 1162248 TACAAGATGGAGAGTTGATTCCTTCTGAATATTATAGTCTG-CAAGTGTGCGTCCGTCTT 1162306 Query 27097 CGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGG 27156 | ||||| || || ||| |||| | | ||||||||| || || | ||| || || || Sbjct 1162307 CAAGCTGCTTTCCAGCGAAAATCAATCTCTGTTGATCAGGTGGAATACCTTCCTTGTCCT 1162366 Query 27157 CGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATT 27216 || || |||| | || | || || | ||||||||||||| ||| |||| || Sbjct 1162367 GAATTTTTGCCTTCACATTCTCAATCGTATCAGAAGCTTCAACTTCTAAAGTAATAGTTT 1162426 Query 27217 TGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | ||||| || ||||| || || |||||||| Sbjct 1162427 TTCCCGTAAGGGTTTTGACGAAAATTTGCAT 1162457 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 27038 TACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTC 27097 ||| | ||| | || || ||||||||||||||||| || | |||| | ||||| Sbjct 1162704 TACAAGATGGAGAGTTGATTCTTTTTGAATATTGTAATCAGAGAGTGTGCGTCCATCTTC 1162763 Query 27098 GAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGC 27157 || || ||||| ||| |||| | | |||||| || || || | |||||| ||||| Sbjct 1162764 AAGTTGCTTACCAGCGAAAATCAATCTCTGTTGGTCTGGTGGAATACCCTCCTTATCTTG 1162823 Query 27158 GATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTT 27217 || || ||| | |||| | || |||| ||||||||||||| ||| || | || Sbjct 1162824 AATTTTTGCTTTAACATTTTCGATGGTATCTGAAGCTTCAACTTCTAAAGTGATCGTCTT 1162883 Query 27218 GCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 ||||| || || || || || |||||||| Sbjct 1162884 TCCCGTAAGGGTCTTGACGAAAATTTGCAT 1162913 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 ||||| || | || | ||| | ||| | || || || ||||||||||| ||||| Sbjct 1161775 CCTCCTCGGAGTCGAAGTACAAGATGGAGAGTTGACTCCTTTTGAATATTATAGTCAGAA 1161834 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | |||| | ||||| || || ||||| ||| |||| | | ||||| || || || Sbjct 1161835 AGTGTGCGTCCATCTTCAAGTTGCTTACCAGCGAAAATCAATCTTTGTTGGTCTGGTGGA 1161894 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | |||||| ||||| ||| || || | |||| | || |||| || |||||| Sbjct 1161895 ATACCCTCCTTATCTTGGATTTTTGCCTTTACATTTTCAATGGTATCTGAAGCCTCAACT 1161954 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 |||| ||| |||| ||| || || || || || || || ||||||||| Sbjct 1161955 TCTAAAGTAATAGTTTTTCCGGTAAGGGTCTTGACGAAAATTTGCATA 1162002 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 27038 TACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTC 27097 ||| | ||| | || || ||||| ||||| || ||||| | |||| | ||||| Sbjct 1162476 TACAAGATGAAGGGTTGATTCTTTCTGAATGTTATAGTCAGAGAGTGTGCGTCCATCTTC 1162535 Query 27098 GAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGC 27157 || || ||||| ||| | || | | |||||| || || || | |||||| ||||| Sbjct 1162536 AAGTTGCTTACCAGCGAAGATCAATCTCTGTTGGTCTGGTGGAATACCCTCCTTATCTTG 1162595 Query 27158 GATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTT 27217 ||| || ||| | | || | || || | ||||||||||||| ||| || | || Sbjct 1162596 GATTTTTGCTTTAACATTCTCAATTGTATCAGAAGCTTCAACTTCTAAAGTGATCGTCTT 1162655 Query 27218 GCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 ||||| |||||||| || || |||||||| Sbjct 1162656 TCCCGTGAGAGTTTTAACGAAAATTTGCAT 1162685 >seq59 Length=4191719 Score = 96.9 bits (106), Expect = 3e-15 Identities = 167/242 (69%), Gaps = 3/242 (1%) Strand=Plus/Minus Query 130732 AAGATCTTTTACCAAATGATTATTAATGATTTGAAAATCACCAGCCAGGACGCGTCTAAC 130791 |||||| || ||||||| ||||| | |||||| || |||| || || | ||| Sbjct 764742 AAGATCCCGTAACAAATGAGGATTAACAACTTGAAACTCTCCAGACAAAACTCTTCTTGT 764683 Query 130792 GTAAATGTTGCTCGTGAACGGTTCAAAGGATTCGTTGTTGCCGAATATTTGTGCTGTAGT 130851 ||||| || | || | ||||| | ||| || || || || || ||||| || |||| Sbjct 764682 ATAAATATTATTAGTATAGGGTTCTATGGACTCATTATTTCCTAAAATTTGCGCAGTAGA 764623 Query 130852 TGCGGTGGGCATGTATGCCACTAATAGAGAATTACGAAGACCGTGCGTCGTGATTTTTCG 130911 ||| || ||||| ||| | ||| | |||||| | || || || | | |||||| Sbjct 764622 TGCTGTTGGCATAGGTGCAATTAACAAAGAATTTCTAACTCCATGTTTAGCAATTTTTTC 764563 Query 130912 CTTCAATTCATCCCAATCCCATAGAGAGGTAGGTTTGACATTGTTCCACATATCAAATTG 130971 ||| || || |||||||||||| | || ||| | ||| ||||||||||| |||| Sbjct 764562 CTTTAAAGCAGCCCAATCCCATAAATCAGTTGGTGTAACA---TTCCACATATCGTATTG 764506 Query 130972 TA 130973 || Sbjct 764505 TA 764504 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424791638773392