Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Habropoda_20laboriosa_20[refseq_20GCF_5F001263275.1_202015-08-13] 27,566 sequences; 296,954,667 total letters Query= NC_028765.1 Length=142348 Score E Sequences producing significant alignments: (Bits) Value seq6304 87.8 2e-12 >seq6304 Length=262131 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/192 (73%), Gaps = 13/192 (7%) Strand=Plus/Minus Query 52980 AATAGACCCCTTGTACAGTGATGTGCATTGAATAATACCTTAAATTGCTAGAA-CATCGT 53038 || || ||||||||| || | |||| | | | |||| ||||||| ||| | ||| Sbjct 59532 AACAGTCCCCTTGTAGAGAAACCTGCAAGGTAACAGACCTCTAATTGCTGGAAACCTCGA 59473 Query 53039 A-AAGCTAACTAAACTACAACGTAACTTGAAAGAGTAAACGTGAATGTTGAGAAATCAGA 53097 || |||| | |||||||||||||| |||| |||| |||||| || | |||| |||| Sbjct 59472 CCAATCTAA--ACACTACAACGTAACTGGAAACGGTAAGCGTGAAAGTAGCGAAAGCAGA 59415 Query 53098 AAAAATTAGTTAGAT---GGTATATGGTTAAATCCT-AAGTACTATATAATCGA-CAAT- 53151 ||||| | |||||| | | ||||||||||||| ||| || ||| || ||| |||| Sbjct 59414 AAAAA-GATTTAGATTGGGTTCAATGGTTAAATCCTAAAGAACCATACAA-CGAGCAATC 59357 Query 53152 -TAGCATCGAAG 53162 ||||| ||||| Sbjct 59356 GTAGCAGCGAAG 59345 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 455228685506880