Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Habropoda_20laboriosa_20[refseq_20GCF_5F001263275.1_202015-08-13] 27,566 sequences; 296,954,667 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq65 95.1 9e-15 >seq65 Length=771584 Score = 95.1 bits (104), Expect = 9e-15 Identities = 94/122 (77%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942 |||||||||||| | || || ||||| || || || ||||| || ||||||||||| Sbjct 537219 GACAAAGAAGGTATCCCTCCCGACCAGCAGCGTTTGATCTTTGCTGGCAAACAATTGGAA 537278 Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002 || | |||| | | || |||||||| |||||||||||| ||| |||| ||||| ||| Sbjct 537279 GATGGGCGCACCCTTTCAGATTACAATATCCAAAAAGAGTCCACACTGCACTTGGTGTTG 537338 Query 28003 CG 28004 || Sbjct 537339 CG 537340 Score = 89.7 bits (98), Expect = 4e-13 Identities = 93/122 (76%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942 ||||||||||| | || || ||||| || ||||| ||||| || ||||| ||||| Sbjct 537447 GACAAAGAAGGAATCCCTCCCGACCAGCAGCGTTTAATCTTTGCTGGCAAACAGTTGGAA 537506 Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002 || | |||| | || ||||||||||||||||||||| ||| |||| ||||| ||| Sbjct 537507 GATGGGCGCACTCTTTCAGATTACAACATCCAAAAAGAGTCCACACTGCACTTGGTGTTG 537566 Query 28003 CG 28004 || Sbjct 537567 CG 537568 Score = 86.0 bits (94), Expect = 4e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942 ||||||||||| | || || ||||| || || || ||||| || ||||| ||||| Sbjct 536535 GACAAAGAAGGAATCCCTCCCGACCAGCAGCGTTTGATCTTTGCTGGTAAACAGTTGGAA 536594 Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002 || | |||| | || |||||||| |||||||||||| ||| ||||| ||||| ||| Sbjct 536595 GATGGGCGCACTCTTTCAGATTACAATATCCAAAAAGAGTCCACATTGCACTTGGTATTG 536654 Query 28003 CG 28004 || Sbjct 536655 CG 536656 Score = 86.0 bits (94), Expect = 4e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942 ||||||||||| | || || ||||| || || || ||||| || ||||||||||| Sbjct 536763 GACAAAGAAGGAATCCCTCCCGACCAGCAGCGTTTGATCTTTGCTGGCAAACAATTGGAA 536822 Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002 || | |||| | || |||||||| |||||||||||| ||| |||| ||||| ||| Sbjct 536823 GATGGGCGCACACTTTCAGATTACAATATCCAAAAAGAGTCCACACTGCACTTGGTGTTG 536882 Query 28003 CG 28004 || Sbjct 536883 CG 536884 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355742844245682