Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Habropoda_20laboriosa_20[refseq_20GCF_5F001263275.1_202015-08-13] 27,566 sequences; 296,954,667 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq59 181 1e-40 seq284 143 4e-29 >seq59 Length=4191719 Score = 181 bits (200), Expect = 1e-40 Identities = 225/308 (73%), Gaps = 0/308 (0%) Strand=Plus/Minus Query 77031 TGAATGGAACCACCATCTGATATAATTGTATTCTTTATATCATCATTCCACAATTTCCTC 77090 ||||| ||||| || || ||||||| ||| || || || | || ||| | | || Sbjct 764807 TGAATAGAACCGTTATTTGCTATAATTTCATTTTTCATGTCCTGATCCCAAAGATCTCTT 764748 Query 77091 TCTGTTAAAACTCTAAGGAGATGAGGATTAACTATTTGAAATTCTCCAGACAATACTCTA 77150 || || | | | | | | |||||||||||| | |||||| ||||||||||| ||||| Sbjct 764747 TCAGTAAGATCCCGTAACAAATGAGGATTAACAACTTGAAACTCTCCAGACAAAACTCTT 764688 Query 77151 CGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCA 77210 | || ||||||||| | ||||| ||||| | || ||||| ||||| |||||||| ||| Sbjct 764687 CTTGTATAAATATTATTAGTATAGGGTTCTATGGACTCATTATTTCCTAAAATTTGCGCA 764628 Query 77211 GTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATT 77270 ||||| || |||||||||||||| | || ||| |||||| | |||||| | ||| Sbjct 764627 GTAGATGCTGTTGGCATAGGTGCAATTAACAAAGAATTTCTAACTCCATGTTTAGCAATT 764568 Query 77271 TTATCTTTTAGATATTTCCAATCCCAAAGATCTGAAGGTACAACATCCCAAAGATCGTAT 77330 || || |||| | ||||||||| | ||| | ||| ||||| ||| | ||||||| Sbjct 764567 TTTTCCTTTAAAGCAGCCCAATCCCATAAATCAGTTGGTGTAACATTCCACATATCGTAT 764508 Query 77331 TGTAGAAT 77338 |||| ||| Sbjct 764507 TGTAAAAT 764500 Score = 141 bits (156), Expect = 1e-28 Identities = 127/158 (80%), Gaps = 1/158 (1%) Strand=Plus/Minus Query 77924 TTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGA 77983 |||||||||||| |||||||||||||| || ||||| |||| | ||||||||| || | Sbjct 763504 TTCAAATTCATCACCCCAAACATCATCTAAACCAGGAGATTCGTGTGGGCACATTAAAGT 763445 Query 77984 CCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAA 78043 ||| ||||| |||| ||||||||||||||| |||||||| ||||||| |||| || Sbjct 763444 CCAAATACCATTTTCCAAAACTCGTTTCATAAAAAGATCAGGAATCCATAAAGCATAGAA 763385 Query 78044 TAGATCTCGGGTTCTATGTTCTTCATTTCCTG-TATTC 78080 || |||| | ||||| |||||| || |||| ||||| Sbjct 763384 TAATTCTCTTGCTCTATTTTCTTCTTTACCTGTTATTC 763347 Score = 120 bits (132), Expect = 4e-22 Identities = 120/156 (77%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 78069 TTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGA 78128 || || ||||| |||||||| || | ||| || | ||| || | |||||||||||||| | Sbjct 763288 TTACCAGTATTTTTTTTAAGGTCCAAAAATTCAAAAATGTCTGCATGCCATGGTTCTAAA 763229 Query 78129 TATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTA 78188 |||| || | |||| |||| |||||| ||||| ||||| | ||||| || || ||| Sbjct 763228 TATAGGGCAAATGCTCCTGGTCTTTTATTCCCTCCTTGATCAACATATCGAGCAGTATTA 763169 Query 78189 TTATAAACTCTCAACATTGGAATAATACCGTTAGAT 78224 ||||| ||||| | |||||||| | ||| |||||| Sbjct 763168 TTATATACTCTAATCATTGGAACTAAACCATTAGAT 763133 Score = 96.9 bits (106), Expect = 5e-15 Identities = 189/276 (68%), Gaps = 5/276 (2%) Strand=Plus/Minus Query 78363 TTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGA 78422 || |||| || | | ||||||||||| || || ||| | |||| ||| | || || Sbjct 762909 TTCAGAA-AATATACCTAGACATTTGCTGTTGCTTAGTACATGCAGCAAAAAGAGTTGGT 762851 Query 78423 GATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATG 78482 || ||||| ||||| | ||| || | | ||| |||||||| |||||| || || Sbjct 762850 GAAGCATGTGTAAAATAACGTTCTGATAAGAAATTATATGTTTCTATAGCTCTGTCAATA 762791 Query 78483 TCCCATTGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTC 78542 || ||| || | || || || | ||| ||||| ||||| || || ||||| Sbjct 762790 TCATCACCATGGATAGCAACTGCAACTCTCATTAACATGTGCTGTGGCCTCTCAACAACT 762731 Query 78543 TTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA- 78601 || || ||| || || || || | |||| | ||||| ||||||||||| ||||| Sbjct 762730 TTTCCATATATCTTTAATAAATAGCTTCTTTCAAGTGTTTTGAAACCAAAATAATTGTAA 762671 Query 78602 -TGAAAAGTCTCTCTCGTAAATAATAACAGAATTTA 78636 ||||| ||||| || ||||| || ||||||||| Sbjct 762670 CTGAAA--TCTCTATCATAAATTATTGCAGAATTTA 762637 Score = 84.2 bits (92), Expect = 3e-11 Identities = 125/172 (73%), Gaps = 4/172 (2%) Strand=Plus/Minus Query 77358 CCATTATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCT 77417 || ||||| ||||| || || |||| |||||| | ||||||||| ||||| || || Sbjct 764410 CCTTTATACGTTTCGTATGGACCTTTCTCTTCAGCAATTTCACAACTGGCTTCTAAAGCA 764351 Query 77418 CCGTAATAAATTGTTTCGAAAATCTTCTTATTGAG-ATCTTGTGCTTCAATACTATCAAA 77476 | ||||| | ||||| || || | |||| || |||| |||||| ||| ||||| Sbjct 764350 CTATAATATAGCGTTTCAAATATTTGGATATTAAGTATCT-GTGCTTTTTCACTTTCAAA 764292 Query 77477 CGGATAATGTA-AAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACC 77527 |||||| | | |||| ||| |||||||| | || |||| ||||||||| Sbjct 764291 CGGATATCGCATTAAGAGGAAA-GCATCTGCGAGACCTTGAATTCCAATACC 764241 >seq284 Length=1419496 Score = 143 bits (158), Expect = 4e-29 Identities = 156/207 (75%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 48411 TAAGTATCTATTAAAAGACTATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAAT 48470 || ||||| ||||| | | |||||||| ||||| | |||||| ||||| | ||||| Sbjct 890232 TATGTATCGATTAACAAAGAGTACATTTCTGAGTGCACATTTTCCATTGCAACTTGAAAG 890173 Query 48471 CCGTAAAAACATCTCGCTTCTGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTC 48530 || ||||| || | || ||||| || || |||||| | |||||||||| | | ||| Sbjct 890172 CCATAAAAGCAACGTGCCTCTGTTATTTGCACCTCCTGGCTAAATCGTTCAACAAGATTT 890113 Query 48531 TCATTTACTATTCCATCACTAGCAGCAAAAAATGCTAATACATGTTTAATAAAATATTTT 48590 ||||| || ||||||||| ||||||||||||||||||||||||| ||||| | ||| Sbjct 890112 TCATTGACAATTCCATCAGAAGCAGCAAAAAATGCTAATACATGTGATATAAATTTTTTC 890053 Query 48591 TCGTTGGAAGTCAGTTTATTCCAGTCA 48617 || || ||| | | ||||||||| Sbjct 890052 TCACTGATAGTTAAACTGTTCCAGTCA 890026 Score = 102 bits (112), Expect = 1e-16 Identities = 115/152 (76%), Gaps = 3/152 (2%) Strand=Plus/Minus Query 47795 TTAAAAGTCAACATCTAAAGAAAAATGATTATCT-TCTTGA--GACATAACTCCCATTTT 47851 |||||||||| ||| | | ||||| | ||| | ||| | ||| |||||| ||| Sbjct 891104 TTAAAAGTCAGCATTAACTGTAAAATTGCTCTCTATTTTGTTTGCCATCACTCCCCATTT 891045 Query 47852 TTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTC 47911 ||||||||| || || |||||||||||| || || || |||||||| || |||| ||| Sbjct 891044 TTGATATTCTCCAACTTTTTTCTCGAAAAAGTTCGTCTTACCTTCCAAAGAAATATGTTC 890985 Query 47912 CATAAAATCAAATGGATTAACTGCATTATAAA 47943 ||| ||||| |||||||| ||| ||||||| Sbjct 890984 CATGAAATCGAATGGATTTTCTGATTTATAAA 890953 Score = 93.3 bits (102), Expect = 6e-14 Identities = 157/225 (70%), Gaps = 8/225 (4%) Strand=Plus/Minus Query 47937 TTATAAAtttttttAAATCCTAATTCTGAAATCAGTCTATCTGCAACGAATTCTATATAT 47996 ||| ||| |||| | ||||||||| || || ||| || ||||| ||||| |||||| Sbjct 890887 TTACAAACCTTTTGGCAACCTAATTCTACAAGCAATCTGTCCGCAACAAATTCAATATAT 890828 Query 47997 CTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGTAGAGCCTCCGTAAGAAAC 48056 ||| | || ||| ||||| ||||| | || ||| |||| ||| || || | ||| Sbjct 890827 TGGCACATGAGTTTACAGTTCATGCCTATCATTTCAACGGGTAAAGCGTCAGTTAAAAAT 890768 Query 48057 TCTTGTTCGATAGTGACAGCATCCACTATTATCGATGTTAC-CGTTTCCTCACTTGGTGG 48115 |||||||| || ||| || || || || ||||| || |||| || | | || Sbjct 890767 TCTTGTTCAATTTGGACCGCGTCTTTAATAATTGATGTGACGCGTT----CATTCGAAGG 890712 Query 48116 ATAC---AACAAATGTTTAAACATTAAACATGCAAAATCACAATG 48157 | | | | |||||||||||||| ||||||||||| ||||| Sbjct 890711 TTTCTGTATGATGTGTTTAAACATTAAGCATGCAAAATCGCAATG 890667 Score = 91.5 bits (100), Expect = 2e-13 Identities = 80/100 (80%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 48636 TCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATATTCCATATATCA 48695 |||||||| || |||||||||| || || ||||||||||| ||||| | ||| || ||| Sbjct 889919 TCTACTTCCTCCACTGTCCAAAAGGAGGCTTCTGCTTTTTTGTACATTTGCCAAATGTCA 889860 Query 48696 CTGTATTGGATTGGGAAAATAACAAATCTATTTGGATTTT 48735 ||||||| || |||| |||||||||| |||||||| Sbjct 889859 GGCCATTGGATAGGAAAAACAACAAATCTACGTGGATTTT 889820 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694429434498240