Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Habropoda_20laboriosa_20[refseq_20GCF_5F001263275.1_202015-08-13] 27,566 sequences; 296,954,667 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq59 187 4e-42 seq284 138 2e-27 >seq59 Length=4191719 Score = 187 bits (206), Expect = 4e-42 Identities = 226/308 (73%), Gaps = 0/308 (0%) Strand=Plus/Minus Query 75626 TGAATGGATCCGCCATCAGATATAATTGTATTCTTGATCTCATCATTCCACAATTTTCTC 75685 ||||| || ||| || | ||||||| ||| || || || | || ||| | | ||| Sbjct 764807 TGAATAGAACCGTTATTTGCTATAATTTCATTTTTCATGTCCTGATCCCAAAGATCTCTT 764748 Query 75686 TCGGTTAAAACTCTAAGGAGATGAGGATTAACAATTTGAAATTCTCCAGACAATACTCTT 75745 || || | | | | | | |||||||||||||| |||||| ||||||||||| |||||| Sbjct 764747 TCAGTAAGATCCCGTAACAAATGAGGATTAACAACTTGAAACTCTCCAGACAAAACTCTT 764688 Query 75746 CGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCA 75805 | || ||||||||| | ||||| ||||| | || ||||| ||||| |||||||| ||| Sbjct 764687 CTTGTATAAATATTATTAGTATAGGGTTCTATGGACTCATTATTTCCTAAAATTTGCGCA 764628 Query 75806 GTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATT 75865 || || || || ||||||||||| | || ||| |||||| | |||||| | ||| Sbjct 764627 GTAGATGCTGTTGGCATAGGTGCAATTAACAAAGAATTTCTAACTCCATGTTTAGCAATT 764568 Query 75866 TTATCTTTTAGATATTTCCAATCCCAAAGATCTGATGGTACAACATCCCAGAGATCGTAT 75925 || || |||| | ||||||||| | ||| | |||| ||||| ||| | ||||||| Sbjct 764567 TTTTCCTTTAAAGCAGCCCAATCCCATAAATCAGTTGGTGTAACATTCCACATATCGTAT 764508 Query 75926 TGTAGAAT 75933 |||| ||| Sbjct 764507 TGTAAAAT 764500 Score = 132 bits (146), Expect = 7e-26 Identities = 125/158 (79%), Gaps = 1/158 (1%) Strand=Plus/Minus Query 76519 TTCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGA 76578 |||||||||||| |||||||||||||| ||||||||| |||| | || ||||| || | Sbjct 763504 TTCAAATTCATCACCCCAAACATCATCTAAACCAGGAGATTCGTGTGGGCACATTAAAGT 763445 Query 76579 CCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAA 76638 ||| ||||| |||| ||| ||||||||||| |||||||| ||||||| |||| || Sbjct 763444 CCAAATACCATTTTCCAAAACTCGTTTCATAAAAAGATCAGGAATCCATAAAGCATAGAA 763385 Query 76639 TAGATCTCGGGTTCTACGTTCTTCATTTCCTG-TATTC 76675 || |||| | |||| |||||| || |||| ||||| Sbjct 763384 TAATTCTCTTGCTCTATTTTCTTCTTTACCTGTTATTC 763347 Score = 120 bits (132), Expect = 4e-22 Identities = 213/311 (68%), Gaps = 0/311 (0%) Strand=Plus/Minus Query 76664 TTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGA 76723 || || ||||| |||||||| || | || || | ||| || | |||||||||||||| | Sbjct 763288 TTACCAGTATTTTTTTTAAGGTCCAAAAATTCAAAAATGTCTGCATGCCATGGTTCTAAA 763229 Query 76724 TATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTA 76783 |||| || | | || |||| |||||| ||||| ||||| | ||||| ||||| ||| Sbjct 763228 TATAGGGCAAATGCTCCTGGTCTTTTATTCCCTCCTTGATCAACATATCGAGCAGTATTA 763169 Query 76784 TTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAA 76843 ||||| ||||| | |||||||| | || |||||| |||| ||| ||| || Sbjct 763168 TTATATACTCTAATCATTGGAACTAAACCATTAGATACACCAAATGTACCACCTATTGGT 763109 Query 76844 CTTCCACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATT 76903 | || ||| |||||| | || || || || || || || ||| ||| Sbjct 763108 GTACCTTTTGCTCGAATACAATGTATGTTAAGTCCAATACCACCAGCAGATTTGCTAATT 763049 Query 76904 AGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGA 76963 || ||||| | || ||||| ||||| || || || || ||||| |||| | || Sbjct 763048 AGTGCACATCTCTTTAATGTATCATAAATTCCTTCAATGCTATCTGAACTCATTGTTAGT 762989 Query 76964 AGAAAACAGCT 76974 |||||||| || Sbjct 762988 AGAAAACAACT 762978 Score = 107 bits (118), Expect = 3e-18 Identities = 250/372 (67%), Gaps = 14/372 (4%) Strand=Plus/Minus Query 76142 TTGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGATTT 76201 ||||| ||| |||||||||| || |||||||| | ||| |||||||||| | ||| Sbjct 764165 TTGGATTTTTTTGCTTCTGGAACTGGATAATAATTGACATCAATAATTTTATCCAAATTA 764106 Query 76202 CTGACAACTACTTTAACCACGTCCTTT---AGTTTGAGAAAATCAAA--TTTTC----CA 76252 | || | ||| ||| |||| ||||| ||||||||| |||| || Sbjct 764105 TAGGTGACAATTTTCGTCAC---CTTTCGAAGTTTTTCAAAATCAAAAGTTTTATTAGCA 764049 Query 76253 TCTATCACAAACATATTAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAGCA 76312 | ||||||||||| | ||| || || || | ||| || || || | |||| | | Sbjct 764048 GGATTTACAAACATATTCACAGCAATTGAAGCCAAATTGCATACAGCAATTTCATCTGGA 763989 Query 76313 TTGGCATATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGT 76372 ||| || |||| || || ||||||| ||| ||||||||||| ||||| | |||||| Sbjct 763988 CTGGAGTACTGTACAATTTCTGTGCATAAATTGCTACACTTGATTGTTCCTATATTTTGA 763929 Query 76373 TGGTTGCTCTTTTTGTTACA-TGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAAT 76431 || || || || || ||| || |||||||| | | |||||||| ||||||| Sbjct 763928 TGATTTGATTTACGATTGCAGTGA-TCTTTATAAAGCATGTAAGGAGTTCCTGTTTCAAC 763870 Query 76432 CTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTTTTATTATAGATTTGTATCGCTT 76491 || | | ||||| | |||| | | |||| |||| | | | ||| |||| || Sbjct 763869 TTGGGCCATAAGAATAGCTGTCCACAAGTCTCTGGCTTGAACTTGACGTTTATATCTTTT 763810 Query 76492 CTCTCTTTCATA 76503 || ||||||| Sbjct 763809 TTCGTTTTCATA 763798 Score = 84.2 bits (92), Expect = 3e-11 Identities = 186/276 (67%), Gaps = 5/276 (2%) Strand=Plus/Minus Query 76958 TTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGA 77017 || |||| || | | ||||||||||| || || ||| | |||| ||| | || || Sbjct 762909 TTCAGAA-AATATACCTAGACATTTGCTGTTGCTTAGTACATGCAGCAAAAAGAGTTGGT 762851 Query 77018 GATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATA 77077 || ||||| || || | ||| || | | ||| |||||||| ||| || || ||| Sbjct 762850 GAAGCATGTGTAAAATAACGTTCTGATAAGAAATTATATGTTTCTATAGCTCTGTCAATA 762791 Query 77078 TCCCATTGATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTC 77137 || ||| || | || || || | ||| ||||| ||||| || | || ||| Sbjct 762790 TCATCACCATGGATAGCAACTGCAACTCTCATTAACATGTGCTGTGGCCTCTCAACAACT 762731 Query 77138 TTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA- 77196 || || ||| || || || || | |||| | ||||| ||||||||||| ||||| Sbjct 762730 TTTCCATATATCTTTAATAAATAGCTTCTTTCAAGTGTTTTGAAACCAAAATAATTGTAA 762671 Query 77197 -TGAAAAGTCTCTTTCGTAAATAATAACCGAATTTA 77231 ||||| ||||| || ||||| || | ||||||| Sbjct 762670 CTGAAA--TCTCTATCATAAATTATTGCAGAATTTA 762637 >seq284 Length=1419496 Score = 138 bits (152), Expect = 2e-27 Identities = 163/218 (75%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 46890 ATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATGAATGTTTTCAATAGC 46949 |||| || ||||||||| ||||| | | ||||||||||| || | ||||| || || Sbjct 890242 ATCTGCAATATATGTATCGATTAACAAAGAGTACATTTCTGAGTGCACATTTTCCATTGC 890183 Query 46950 CATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTCTGTACAAAATCGTTC 47009 | ||||| || ||||| || | ||| || || || || ||||| | ||||||||| Sbjct 890182 AACTTGAAAGCCATAAAAGCAACGTGCCTCTGTTATTTGCACCTCCTGGCTAAATCGTTC 890123 Query 47010 AGACAA-ATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGCCAATACATGTTTAA 47068 | |||| ||| ||||| || ||||||||| ||||||||||||||| ||||||||| | Sbjct 890122 A-ACAAGATTTTCATTGACAATTCCATCAGAAGCAGCAAAAAATGCTAATACATGTGATA 890064 Query 47069 TAAAATATTTTTCATCGGTAGTCAGTTTATTCCAGTCA 47106 |||| | ||| ||| | |||| | | ||||||||| Sbjct 890063 TAAATTTTTTCTCACTGATAGTTAAACTGTTCCAGTCA 890026 Score = 96.9 bits (106), Expect = 5e-15 Identities = 154/221 (70%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 46426 TTATAAAtttttttAAATCCTAATTCTGAAATCAGTCTATCTGCAACGAATTCTATATAC 46485 ||| ||| |||| | ||||||||| || || ||| || ||||| ||||| ||||| Sbjct 890887 TTACAAACCTTTTGGCAACCTAATTCTACAAGCAATCTGTCCGCAACAAATTCAATATAT 890828 Query 46486 GTTTTCATCATTTCACAATTCATTCCTATGAGTTTGACCGGTAGAGCCTCCGTAAGAAAC 46545 ||| | || ||| ||||| ||||| | || || |||| ||| || || | ||| Sbjct 890827 TGGCACATGAGTTTACAGTTCATGCCTATCATTTCAACGGGTAAAGCGTCAGTTAAAAAT 890768 Query 46546 TCTTGTTCAATAGTGACAGCATCCGATATTATCGATGTTACTGTTTCCTCACTTGGTGGA 46605 ||||||||||| ||| || || || || ||||| || ||| | ||| Sbjct 890767 TCTTGTTCAATTTGGACCGCGTCTTTAATAATTGATGTGACGCGTTCATTCGAAGGTTTC 890708 Query 46606 TGCATCAAATGTTTAAACATTAAACATGCAAAATCACAATG 46646 || || | |||||||||||||| ||||||||||| ||||| Sbjct 890707 TGTATGATGTGTTTAAACATTAAGCATGCAAAATCGCAATG 890667 Score = 95.1 bits (104), Expect = 2e-14 Identities = 81/100 (81%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 47125 TCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATTCCATATATCA 47184 |||||||| || ||||||| || || || ||||||||||| ||||| | ||| || ||| Sbjct 889919 TCTACTTCCTCCACTGTCCAAAAGGAGGCTTCTGCTTTTTTGTACATTTGCCAAATGTCA 889860 Query 47185 CGATATTGGATCGGAAAAATAACAAATCTATTTGGATTTT 47224 | ||||||| ||||||| |||||||||| |||||||| Sbjct 889859 GGCCATTGGATAGGAAAAACAACAAATCTACGTGGATTTT 889820 Score = 86.0 bits (94), Expect = 9e-12 Identities = 103/138 (75%), Gaps = 3/138 (2%) Strand=Plus/Minus Query 46284 TTAAAAGTCGACATCTAAAGAAAAATGATTATCT-TCTTGT--GACATAACTCCCATTTT 46340 ||||||||| ||| | | ||||| | ||| | |||| | ||| |||||| ||| Sbjct 891104 TTAAAAGTCAGCATTAACTGTAAAATTGCTCTCTATTTTGTTTGCCATCACTCCCCATTT 891045 Query 46341 TTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTC 46400 ||| ||||| || || |||||||||||| || || || |||||||| || |||| ||| Sbjct 891044 TTGATATTCTCCAACTTTTTTCTCGAAAAAGTTCGTCTTACCTTCCAAAGAAATATGTTC 890985 Query 46401 CATAAAATCAAACGGATT 46418 ||| ||||| || ||||| Sbjct 890984 CATGAAATCGAATGGATT 890967 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712688740629120