Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Habropoda_20laboriosa_20[refseq_20GCF_5F001263275.1_202015-08-13]
27,566 sequences; 296,954,667 total letters
Query= NC_031280.1
Length=104906
Score E
Sequences producing significant alignments: (Bits) Value
seq6058 89.7 3e-13
>seq6058
Length=97819
Score = 89.7 bits (98), Expect = 3e-13
Identities = 88/114 (77%), Gaps = 0/114 (0%)
Strand=Plus/Minus
Query 53946 CATGGTCTTGAGTGGTGGGGTGAAGAGTTTGGTGTACCTAAACCGAAGATCGACAATTGG 54005
||||||||||||| ||||||||| | ||||| || || ||||| ||||| | |||||
Sbjct 38366 CATGGTCTTGAGTCTTGGGGTGAATATTTTGGAGTTCCCAAACCAGAGATCAAGGATTGG 38307
Query 54006 GAAGACTTAACACAAGAAGAGTATGATCATCGTGTTATAGAGGACTGTAAGATT 54059
| | ||||| ||| ||| ||||||||||||||| | || || |||||||
Sbjct 38306 AAGAAGTTAACTCAAAGAGATTATGATCATCGTGTTGTTGAAGATGTTAAGATT 38253
Score = 82.4 bits (90), Expect = 5e-11
Identities = 115/159 (72%), Gaps = 2/159 (1%)
Strand=Plus/Minus
Query 50650 AATAATCTATCTGATAGATGGAAGGATTACTTTATTAAGGAGCTACATTTAATTGCATCA 50709
|||||| ||||||||||||||||||||||||| || || ||| ||| | | |
Sbjct 41951 AATAATTTATCTGATAGATGGAAGGATTACTTCATAAAATCACTATTATTAGTGAAAGAA 41892
Query 50710 ATGTCAAGAGATGTGGATACAAAGGTTGGGGCGATTATTATTGATACAGAGAATAAAGT- 50768
| || | |||| || ||| | ||||| || |||||||||||| ||| || |||||
Sbjct 41891 TTATCTAAAGATAAAGAAACACAAGTTGGTGCTATTATTATTGATTTAGA-AACAAAGTC 41833
Query 50769 TGTCATAGCTAAAGGCTACAACGATTTACCAAGAGGTGT 50807
||||| || || | ||| | |||||| ||||||||
Sbjct 41832 AATCATATCTTCTGGTTTCAATGGTTTACCTAGAGGTGT 41794
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 335461660214842
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |