Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Habropoda_20laboriosa_20[refseq_20GCF_5F001263275.1_202015-08-13]
27,566 sequences; 296,954,667 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq65 98.7 9e-16
seq49 98.7 9e-16
>seq65
Length=771584
Score = 98.7 bits (108), Expect = 9e-16
Identities = 160/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || || || ||||||| ||||| || ||| ||||| ||||| || || ||
Sbjct 538948 CCTCCTCGGAGTCGCAACACCAAGTGCAGTGTCGACTCTTTCTGGATGTTGTAATCTGAA 538889
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| ||||| | || || ||||| || || || || |||| ||||| ||||| | ||
Sbjct 538888 AGAGTGCGACCATCTTCCAGCTGTTTACCAGCAAAGATCAAACGCTGCTGGTCAGGAGGG 538829
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| | || ||||| ||| | || |||| |||| | | ||||| | ||| ||
Sbjct 538828 ATTCCTTCTTTGTCT-TGAATCTTGGCTTTAACGTTCTCTATTGTGTCTGAAGCCTCAAC 538770
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|||| || || ||||| |||||||||||||| || || ||||||||
Sbjct 538769 TTCCAGGGTGATGGTTTTCCCCGTCAGCGTCTTGACAAAGATCTGCAT 538722
Score = 93.3 bits (102), Expect = 4e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || || || ||||||| ||||| ||| ||| || || || || || || ||
Sbjct 537352 CCTCCTCGGAGTCGCAACACCAAGTGCAGTGTGGACTCTTTTTGGATATTGTAATCTGAA 537293
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
||||||||| | || || | || ||||| || || |||| ||||| ||||| | ||
Sbjct 537292 AGGGTGCGCCCATCTTCCAATTGTTTGCCAGCAAAGATCAAACGCTGCTGGTCGGGAGGG 537233
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| | || ||||| ||| | || || | |||| | | ||||| | ||| ||
Sbjct 537232 ATACCTTCTTTGTCT-TGAATCTTGGCCTTAACGTTTTCTATTGTGTCTGAAGCCTCAAC 537174
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|| | || || ||||| |||||||||||||| ||||| ||||||||
Sbjct 537173 TTCGAGTGTGATGGTTTTCCCCGTCAGCGTCTTAACGAAGATCTGCAT 537126
>seq49
Length=1886280
Score = 98.7 bits (108), Expect = 9e-16
Identities = 160/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || || || | || ||||| || || |||||| |||||||||||||| ||
Sbjct 1161329 CCTCCTCGGAGTCGCAGAACGAGATGAAGAGTTGACTCCTTTTGAATGTTATAGTCCGAA 1161388
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| ||||| | || || || ||||| || ||||| |||| | |||||||| | |||
Sbjct 1161389 AGTGTGCGTCCATCTTCAAGTTGCTTACCAGCGAAAATCAATCTTTGTTGGTCTGGTGGA 1161448
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTG-CTTCAACGACGACACAGTGTCGCTCGACTCCAC 41814
| || |||||||||| ||| |||||| ||||| | | || || | || ||
Sbjct 1161449 ATGCCCTCCTTGTCC-TGAATTTTTGCCTTCACATTCTCAATCGTATCAGAAGCTTCAAC 1161507
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|| | || || ||||| || || || || || |||||||| |||||
Sbjct 1161508 TTCTAAAGTAATAGTTTTTCCAGTAAGGGTTTTGACGAAAATTTGCAT 1161555
Score = 93.3 bits (102), Expect = 4e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || || || | || ||||| || || ||||||||||| |||||||| |
Sbjct 1162231 CCACCTCGGAGTCGAAGTACAAGATGGAGAGTTGATTCCTTCTGAATATTATAGTCTGCA 1162290
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| ||||| |||| || |||||||| || ||||| |||| | |||||| || | |||
Sbjct 1162291 AGTGTGCGTCCGTCTTCAAGCTGCTTTCCAGCGAAAATCAATCTCTGTTGATCAGGTGGA 1162350
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTG-CTTCAACGACGACACAGTGTCGCTCGACTCCAC 41814
| | ||||||||| ||| |||||| ||||| | | || || | || ||
Sbjct 1162351 ATACCTTCCTTGTCC-TGAATTTTTGCCTTCACATTCTCAATCGTATCAGAAGCTTCAAC 1162409
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|| | || || ||||| ||||| || || || |||||||| |||||
Sbjct 1162410 TTCTAAAGTAATAGTTTTTCCCGTAAGGGTTTTGACGAAAATTTGCAT 1162457
Score = 93.3 bits (102), Expect = 4e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || || || | || ||||| || || || ||||||||||||||||| |||
Sbjct 1162459 CCACCTCGAAGTCGAAGTACAAGATGAAGGGTTGATTCTTTCTGAATGTTATAGTCAGAG 1162518
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| ||||| | || || || ||||| || ||||| |||| | ||||||||| | |||
Sbjct 1162519 AGTGTGCGTCCATCTTCAAGTTGCTTACCAGCGAAGATCAATCTCTGTTGGTCTGGTGGA 1162578
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAAC-GACGACACAGTGTCGCTCGACTCCAC 41814
| | |||||| | | || ||||||||| ||| | | || || | || ||
Sbjct 1162579 ATACCCTCCTTAT-CTTGGATTTTTGCTTTAACATTCTCAATTGTATCAGAAGCTTCAAC 1162637
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|| | || ||||| || ||||| || || || |||||||| |||||
Sbjct 1162638 TTCTAAAGTGATCGTCTTTCCCGTGAGAGTTTTAACGAAAATTTGCAT 1162685
Score = 89.7 bits (98), Expect = 5e-13
Identities = 158/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || || || | || ||||| || || ||||||||||| |||||||| |
Sbjct 1162003 CCACCTCGAAGTCGCAGAACAAGATGAAGAGTTGATTCCTTCTGAATATTATAGTCTGCA 1162062
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| ||||| |||| || |||||||| || ||||| |||| | |||||| || | |||
Sbjct 1162063 AGTGTGCGTCCGTCTTCAAGCTGCTTACCAGCGAAAATCAATCTCTGTTGATCAGGTGGA 1162122
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTG-CTTCAACGACGACACAGTGTCGCTCGACTCCAC 41814
| | ||||||||| ||| |||||| ||||| | | || || | || ||
Sbjct 1162123 ATACCTTCCTTGTCC-TGAATTTTTGCCTTCACATTCTCAATTGTATCAGAAGCTTCAAC 1162181
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|| | || || || || ||||| || || || |||||||| |||||
Sbjct 1162182 TTCTAAAGTGATTGTCTTTCCCGTGAGAGTTTTAACGAAAATTTGCAT 1162229
Score = 84.2 bits (92), Expect = 2e-11
Identities = 146/210 (70%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713
|| ||||| || || ||||||||||| |||||||| | || ||||| |||| ||
Sbjct 1160891 ACAAGATGGAGAGTTGATTCCTTCTGAATATTATAGTCTGCAAGTGTGCGTCCGTCTTCA 1160950
Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773
|||||||| || ||||| |||| | || || || | ||||| || |||||| | | ||
Sbjct 1160951 AGCTGCTTACCAGCGAAAATCAATCTTTGCTGATCTGGGGGAATGCCCTCCTTAT-CTTG 1161009
Query 41774 ATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTT 41832
||||||||| ||| | | || || | || || || | || ||||| ||
Sbjct 1161010 GATTTTTGCTTTAACATTTTCAATGGTATCTGAAGCTTCAACTTCTAAAGTGATCGTCTT 1161069
Query 41833 ACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|| || || || || |||||||| |||||
Sbjct 1161070 TCCAGTAAGGGTTTTGACGAAAATTTGCAT 1161099
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462144701599200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |