Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Habropoda_20laboriosa_20[refseq_20GCF_5F001263275.1_202015-08-13] 27,566 sequences; 296,954,667 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq65 98.7 9e-16 seq49 98.7 9e-16 >seq65 Length=771584 Score = 98.7 bits (108), Expect = 9e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || ||||||| ||||| || ||| ||||| ||||| || || || Sbjct 538948 CCTCCTCGGAGTCGCAACACCAAGTGCAGTGTCGACTCTTTCTGGATGTTGTAATCTGAA 538889 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| | || || ||||| || || || || |||| ||||| ||||| | || Sbjct 538888 AGAGTGCGACCATCTTCCAGCTGTTTACCAGCAAAGATCAAACGCTGCTGGTCAGGAGGG 538829 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | || ||||| ||| | || |||| |||| | | ||||| | ||| || Sbjct 538828 ATTCCTTCTTTGTCT-TGAATCTTGGCTTTAACGTTCTCTATTGTGTCTGAAGCCTCAAC 538770 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| || || ||||| |||||||||||||| || || |||||||| Sbjct 538769 TTCCAGGGTGATGGTTTTCCCCGTCAGCGTCTTGACAAAGATCTGCAT 538722 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || ||||||| ||||| ||| ||| || || || || || || || Sbjct 537352 CCTCCTCGGAGTCGCAACACCAAGTGCAGTGTGGACTCTTTTTGGATATTGTAATCTGAA 537293 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||||||| | || || | || ||||| || || |||| ||||| ||||| | || Sbjct 537292 AGGGTGCGCCCATCTTCCAATTGTTTGCCAGCAAAGATCAAACGCTGCTGGTCGGGAGGG 537233 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | || ||||| ||| | || || | |||| | | ||||| | ||| || Sbjct 537232 ATACCTTCTTTGTCT-TGAATCTTGGCCTTAACGTTTTCTATTGTGTCTGAAGCCTCAAC 537174 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || | || || ||||| |||||||||||||| ||||| |||||||| Sbjct 537173 TTCGAGTGTGATGGTTTTCCCCGTCAGCGTCTTAACGAAGATCTGCAT 537126 >seq49 Length=1886280 Score = 98.7 bits (108), Expect = 9e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | || ||||| || || |||||| |||||||||||||| || Sbjct 1161329 CCTCCTCGGAGTCGCAGAACGAGATGAAGAGTTGACTCCTTTTGAATGTTATAGTCCGAA 1161388 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| | || || || ||||| || ||||| |||| | |||||||| | ||| Sbjct 1161389 AGTGTGCGTCCATCTTCAAGTTGCTTACCAGCGAAAATCAATCTTTGTTGGTCTGGTGGA 1161448 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTG-CTTCAACGACGACACAGTGTCGCTCGACTCCAC 41814 | || |||||||||| ||| |||||| ||||| | | || || | || || Sbjct 1161449 ATGCCCTCCTTGTCC-TGAATTTTTGCCTTCACATTCTCAATCGTATCAGAAGCTTCAAC 1161507 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || | || || ||||| || || || || || |||||||| ||||| Sbjct 1161508 TTCTAAAGTAATAGTTTTTCCAGTAAGGGTTTTGACGAAAATTTGCAT 1161555 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | || ||||| || || ||||||||||| |||||||| | Sbjct 1162231 CCACCTCGGAGTCGAAGTACAAGATGGAGAGTTGATTCCTTCTGAATATTATAGTCTGCA 1162290 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| |||| || |||||||| || ||||| |||| | |||||| || | ||| Sbjct 1162291 AGTGTGCGTCCGTCTTCAAGCTGCTTTCCAGCGAAAATCAATCTCTGTTGATCAGGTGGA 1162350 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTG-CTTCAACGACGACACAGTGTCGCTCGACTCCAC 41814 | | ||||||||| ||| |||||| ||||| | | || || | || || Sbjct 1162351 ATACCTTCCTTGTCC-TGAATTTTTGCCTTCACATTCTCAATCGTATCAGAAGCTTCAAC 1162409 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || | || || ||||| ||||| || || || |||||||| ||||| Sbjct 1162410 TTCTAAAGTAATAGTTTTTCCCGTAAGGGTTTTGACGAAAATTTGCAT 1162457 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | || ||||| || || || ||||||||||||||||| ||| Sbjct 1162459 CCACCTCGAAGTCGAAGTACAAGATGAAGGGTTGATTCTTTCTGAATGTTATAGTCAGAG 1162518 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| | || || || ||||| || ||||| |||| | ||||||||| | ||| Sbjct 1162519 AGTGTGCGTCCATCTTCAAGTTGCTTACCAGCGAAGATCAATCTCTGTTGGTCTGGTGGA 1162578 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAAC-GACGACACAGTGTCGCTCGACTCCAC 41814 | | |||||| | | || ||||||||| ||| | | || || | || || Sbjct 1162579 ATACCCTCCTTAT-CTTGGATTTTTGCTTTAACATTCTCAATTGTATCAGAAGCTTCAAC 1162637 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || | || ||||| || ||||| || || || |||||||| ||||| Sbjct 1162638 TTCTAAAGTGATCGTCTTTCCCGTGAGAGTTTTAACGAAAATTTGCAT 1162685 Score = 89.7 bits (98), Expect = 5e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | || ||||| || || ||||||||||| |||||||| | Sbjct 1162003 CCACCTCGAAGTCGCAGAACAAGATGAAGAGTTGATTCCTTCTGAATATTATAGTCTGCA 1162062 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| |||| || |||||||| || ||||| |||| | |||||| || | ||| Sbjct 1162063 AGTGTGCGTCCGTCTTCAAGCTGCTTACCAGCGAAAATCAATCTCTGTTGATCAGGTGGA 1162122 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTG-CTTCAACGACGACACAGTGTCGCTCGACTCCAC 41814 | | ||||||||| ||| |||||| ||||| | | || || | || || Sbjct 1162123 ATACCTTCCTTGTCC-TGAATTTTTGCCTTCACATTCTCAATTGTATCAGAAGCTTCAAC 1162181 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || | || || || || ||||| || || || |||||||| ||||| Sbjct 1162182 TTCTAAAGTGATTGTCTTTCCCGTGAGAGTTTTAACGAAAATTTGCAT 1162229 Score = 84.2 bits (92), Expect = 2e-11 Identities = 146/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 || ||||| || || ||||||||||| |||||||| | || ||||| |||| || Sbjct 1160891 ACAAGATGGAGAGTTGATTCCTTCTGAATATTATAGTCTGCAAGTGTGCGTCCGTCTTCA 1160950 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 |||||||| || ||||| |||| | || || || | ||||| || |||||| | | || Sbjct 1160951 AGCTGCTTACCAGCGAAAATCAATCTTTGCTGATCTGGGGGAATGCCCTCCTTAT-CTTG 1161009 Query 41774 ATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTT 41832 ||||||||| ||| | | || || | || || || | || ||||| || Sbjct 1161010 GATTTTTGCTTTAACATTTTCAATGGTATCTGAAGCTTCAACTTCTAAAGTGATCGTCTT 1161069 Query 41833 ACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || || || || || |||||||| ||||| Sbjct 1161070 TCCAGTAAGGGTTTTGACGAAAATTTGCAT 1161099 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462144701599200