Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Halyomorpha_20halys_20[refseq_20GCF_5F000696795.1_202014-06-03]
12,168 sequences; 1,150,108,890 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq2523 132 6e-26
seq53 113 5e-20
>seq2523
Length=169028
Score = 132 bits (146), Expect = 6e-26
Identities = 217/309 (70%), Gaps = 9/309 (3%)
Strand=Plus/Minus
Query 53596 AGGATAATAATTAATATCTATAATTTTATTGAGGTTTC---TGACAATTACTTTGACCAC 53652
|||||||||||| || ||||| || ||||| || || | | |||| ||||| ||
Sbjct 121642 AGGATAATAATTTATGTCTATTATCTTATTTAGATTCCATGTAACAAC--CTTTGTT-AC 121586
Query 53653 ATCCTTCAGTTTGAGAAAATCAAA---TTGTCCATCTATTACAAACATGTTCAATGCAAT 53709
| | |||| || ||||||| | || || || | | ||| | | ||||||||
Sbjct 121585 AGCTTTCAACTTTTCAAAATCACAGGTTTTATCAGCTTTCATAAATTTACTTAATGCAAT 121526
Query 53710 AGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCA 53769
||||| | ||||||||| || | |||| | | | ||||| || || ||||| ||
Sbjct 121525 TGATGCTAAATTACAAACAGCAATTTCATCTGAAGAAGTATATTCAATAATTTCAGTACA 121466
Query 53770 AAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATC 53829
||||||||||||||| || ||||||| ||||| ||||| || | || || | |||
Sbjct 121465 AAGATTACTACACTTAATAGTTCCTAGATTTTTCTGATTTGATTTCCTATTGCAAGAATC 121406
Query 53830 CTTATAAAGAATGAATGGCGTACCAGTTTCAATCTGGGATTCTATAATCGCTTTCCAGAC 53889
||||| | ||| | || ||||||||||| || ||||| || || ||||||||||
Sbjct 121405 TTTATACAACATGTAAGGTACACCAGTTTCAACTTGAGATTCAATGATAGCTTTCCAGAG 121346
Query 53890 GACACGAGC 53898
|||||||
Sbjct 121345 ATCACGAGC 121337
Score = 107 bits (118), Expect = 2e-18
Identities = 134/182 (74%), Gaps = 4/182 (2%)
Strand=Plus/Minus
Query 53149 TACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCAC 53208
||| |||||||| ||||| | |||||| | || ||||||||| || || ||||| |
Sbjct 123317 TACCTGAAATTCACCAGAAAGTACTCTTCTTGTATAAATATTAGATGTGTATGGTTCAAA 123258
Query 53209 AGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAA 53268
|| |||||||| || |||||||||||||| || ||||| ||||| ||||| | | ||
Sbjct 123257 TGATTCATTATTGCCTAAAATTTGAGCAGTAGAAGCAGTTGGCATGGGTGCGATAAGCAA 123198
Query 53269 ACTATTTCTAAGACCGTATGTTCTG--ATTTTATCTTTTAGAGGTTCCCAATTCCAAAGA 53326
| ||| | | || ||||| || ||||| ||||| | | |||||| |||||||
Sbjct 123197 AGAATTCCGTAATCC--ATGTTTTGAAATTTTTTCTTTCAATGCAGCCCAATCCCAAAGA 123140
Query 53327 TC 53328
||
Sbjct 123139 TC 123138
Score = 84.2 bits (92), Expect = 3e-11
Identities = 103/141 (73%), Gaps = 0/141 (0%)
Strand=Plus/Minus
Query 54424 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATT 54483
|||| | ||| | ||||| || || || || || ||||| || |||||| || | |||
Sbjct 113586 AGTTGCAGCACTGAATAATGTGGGTGAGGCATGTGTAAAATATCCTTCAGAGAGCAAATT 113527
Query 54484 GTACGTCTCGATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAA 54543
||| || | ||| | | ||||||||| ||| ||||| || || || | ||| ||
Sbjct 113526 GTATGTTTTAATAACAGCATCTATATCCTCACCATGGATTCCAACAGCAACCCTCATCAA 113467
Query 54544 CATGTGCTGAGGTCTTTCAAC 54564
|||||| ||||||||||||||
Sbjct 113466 CATGTGTTGAGGTCTTTCAAC 113446
>seq53
Length=1573976
Score = 113 bits (124), Expect = 5e-20
Identities = 150/206 (73%), Gaps = 3/206 (1%)
Strand=Plus/Minus
Query 24177 TCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCA 24236
|| || ||||| || ||||| ||||| || || | ||| ||||||||||| || | |||
Sbjct 796304 TCATTTGAAAAGGTAAGTCCTGGCATGAGACCTCTCTTCTTAAGCCAAAAAATAGCAGCA 796245
Query 24237 AATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAA 24296
|| || |||||||||||||||||||| || || ||||| || | | ||| || ||| ||
Sbjct 796244 AAGGAGCCAGAAAAGAAAATTCCTTCAACAGCAGCAAACGCTACTATTCTCTCACCAAAA 796185
Query 24297 CCGGCGCTGTCA-TG--TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGC 24353
||| || | || ||||| | |||||||| |||||||| || ||||| |
Sbjct 796184 GTGGCCGTGGGACTGGAGATCCAAGAAAGTGCCCAATCAGCCTTCTTCTTAACACACTCC 796125
Query 24354 ATTGTCTCTATAGCATTAAAGAGATA 24379
|| || || || ||||| || | |||
Sbjct 796124 ATGGTTTCGATGGCATTGAATAAATA 796099
Score = 105 bits (116), Expect = 8e-18
Identities = 99/126 (79%), Gaps = 0/126 (0%)
Strand=Plus/Minus
Query 24621 TTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTC 24680
||||| | ||| ||||| || | |||||||| ||||| || || ||||| ||||| |||
Sbjct 793942 TTAGAGAGATCAACTTCCTCAGCAGTCCAAAAGGATGCTTCAGCTTTTTTGTACATCTTC 793883
Query 24681 CAGATGTCATGATATTGAATTGGAAAAATAACAAATCTATTTGGATTTTTTGCAAGGATT 24740
|| || |||||||||| |||||| ||||||||||| || |||| || | | |||||
Sbjct 793882 CATATATCATGATATTCAATTGGGAAAATAACAAACCTCCTTGGGTTATCTTTAAGGAGG 793823
Query 24741 GGTTCC 24746
||||||
Sbjct 793822 GGTTCC 793817
Score = 87.8 bits (96), Expect = 2e-12
Identities = 78/98 (80%), Gaps = 0/98 (0%)
Strand=Plus/Minus
Query 24395 ATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 24454
|||| ||| ||| |||||||| | || || ||||| || ||||| | |||||| || ||
Sbjct 794344 ATCTCTAATATAAGTATCAATGAGCAGGCTGTACATCTCAGAATGCACGTTTTCCATAGC 794285
Query 24455 CATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCT 24492
|||||||| ||||||||||| ||||| || |||| ||
Sbjct 794284 AATTTGAAAACCGTAGAAACACCTAGCTTCAGTAACCT 794247
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593631294944640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |