Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Halyomorpha_20halys_20[refseq_20GCF_5F000696795.1_202014-06-03] 12,168 sequences; 1,150,108,890 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq2523 132 6e-26 seq53 113 5e-20 >seq2523 Length=169028 Score = 132 bits (146), Expect = 6e-26 Identities = 217/309 (70%), Gaps = 9/309 (3%) Strand=Plus/Minus Query 53596 AGGATAATAATTAATATCTATAATTTTATTGAGGTTTC---TGACAATTACTTTGACCAC 53652 |||||||||||| || ||||| || ||||| || || | | |||| ||||| || Sbjct 121642 AGGATAATAATTTATGTCTATTATCTTATTTAGATTCCATGTAACAAC--CTTTGTT-AC 121586 Query 53653 ATCCTTCAGTTTGAGAAAATCAAA---TTGTCCATCTATTACAAACATGTTCAATGCAAT 53709 | | |||| || ||||||| | || || || | | ||| | | |||||||| Sbjct 121585 AGCTTTCAACTTTTCAAAATCACAGGTTTTATCAGCTTTCATAAATTTACTTAATGCAAT 121526 Query 53710 AGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCA 53769 ||||| | ||||||||| || | |||| | | | ||||| || || ||||| || Sbjct 121525 TGATGCTAAATTACAAACAGCAATTTCATCTGAAGAAGTATATTCAATAATTTCAGTACA 121466 Query 53770 AAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATC 53829 ||||||||||||||| || ||||||| ||||| ||||| || | || || | ||| Sbjct 121465 AAGATTACTACACTTAATAGTTCCTAGATTTTTCTGATTTGATTTCCTATTGCAAGAATC 121406 Query 53830 CTTATAAAGAATGAATGGCGTACCAGTTTCAATCTGGGATTCTATAATCGCTTTCCAGAC 53889 ||||| | ||| | || ||||||||||| || ||||| || || |||||||||| Sbjct 121405 TTTATACAACATGTAAGGTACACCAGTTTCAACTTGAGATTCAATGATAGCTTTCCAGAG 121346 Query 53890 GACACGAGC 53898 ||||||| Sbjct 121345 ATCACGAGC 121337 Score = 107 bits (118), Expect = 2e-18 Identities = 134/182 (74%), Gaps = 4/182 (2%) Strand=Plus/Minus Query 53149 TACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCAC 53208 ||| |||||||| ||||| | |||||| | || ||||||||| || || ||||| | Sbjct 123317 TACCTGAAATTCACCAGAAAGTACTCTTCTTGTATAAATATTAGATGTGTATGGTTCAAA 123258 Query 53209 AGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAA 53268 || |||||||| || |||||||||||||| || ||||| ||||| ||||| | | || Sbjct 123257 TGATTCATTATTGCCTAAAATTTGAGCAGTAGAAGCAGTTGGCATGGGTGCGATAAGCAA 123198 Query 53269 ACTATTTCTAAGACCGTATGTTCTG--ATTTTATCTTTTAGAGGTTCCCAATTCCAAAGA 53326 | ||| | | || ||||| || ||||| ||||| | | |||||| ||||||| Sbjct 123197 AGAATTCCGTAATCC--ATGTTTTGAAATTTTTTCTTTCAATGCAGCCCAATCCCAAAGA 123140 Query 53327 TC 53328 || Sbjct 123139 TC 123138 Score = 84.2 bits (92), Expect = 3e-11 Identities = 103/141 (73%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 54424 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATT 54483 |||| | ||| | ||||| || || || || || ||||| || |||||| || | ||| Sbjct 113586 AGTTGCAGCACTGAATAATGTGGGTGAGGCATGTGTAAAATATCCTTCAGAGAGCAAATT 113527 Query 54484 GTACGTCTCGATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAA 54543 ||| || | ||| | | ||||||||| ||| ||||| || || || | ||| || Sbjct 113526 GTATGTTTTAATAACAGCATCTATATCCTCACCATGGATTCCAACAGCAACCCTCATCAA 113467 Query 54544 CATGTGCTGAGGTCTTTCAAC 54564 |||||| |||||||||||||| Sbjct 113466 CATGTGTTGAGGTCTTTCAAC 113446 >seq53 Length=1573976 Score = 113 bits (124), Expect = 5e-20 Identities = 150/206 (73%), Gaps = 3/206 (1%) Strand=Plus/Minus Query 24177 TCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCA 24236 || || ||||| || ||||| ||||| || || | ||| ||||||||||| || | ||| Sbjct 796304 TCATTTGAAAAGGTAAGTCCTGGCATGAGACCTCTCTTCTTAAGCCAAAAAATAGCAGCA 796245 Query 24237 AATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAA 24296 || || |||||||||||||||||||| || || ||||| || | | ||| || ||| || Sbjct 796244 AAGGAGCCAGAAAAGAAAATTCCTTCAACAGCAGCAAACGCTACTATTCTCTCACCAAAA 796185 Query 24297 CCGGCGCTGTCA-TG--TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGC 24353 ||| || | || ||||| | |||||||| |||||||| || ||||| | Sbjct 796184 GTGGCCGTGGGACTGGAGATCCAAGAAAGTGCCCAATCAGCCTTCTTCTTAACACACTCC 796125 Query 24354 ATTGTCTCTATAGCATTAAAGAGATA 24379 || || || || ||||| || | ||| Sbjct 796124 ATGGTTTCGATGGCATTGAATAAATA 796099 Score = 105 bits (116), Expect = 8e-18 Identities = 99/126 (79%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 24621 TTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTC 24680 ||||| | ||| ||||| || | |||||||| ||||| || || ||||| ||||| ||| Sbjct 793942 TTAGAGAGATCAACTTCCTCAGCAGTCCAAAAGGATGCTTCAGCTTTTTTGTACATCTTC 793883 Query 24681 CAGATGTCATGATATTGAATTGGAAAAATAACAAATCTATTTGGATTTTTTGCAAGGATT 24740 || || |||||||||| |||||| ||||||||||| || |||| || | | ||||| Sbjct 793882 CATATATCATGATATTCAATTGGGAAAATAACAAACCTCCTTGGGTTATCTTTAAGGAGG 793823 Query 24741 GGTTCC 24746 |||||| Sbjct 793822 GGTTCC 793817 Score = 87.8 bits (96), Expect = 2e-12 Identities = 78/98 (80%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 24395 ATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 24454 |||| ||| ||| |||||||| | || || ||||| || ||||| | |||||| || || Sbjct 794344 ATCTCTAATATAAGTATCAATGAGCAGGCTGTACATCTCAGAATGCACGTTTTCCATAGC 794285 Query 24455 CATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCT 24492 |||||||| ||||||||||| ||||| || |||| || Sbjct 794284 AATTTGAAAACCGTAGAAACACCTAGCTTCAGTAACCT 794247 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593631294944640