Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Halyomorpha_20halys_20[refseq_20GCF_5F000696795.1_202014-06-03] 12,168 sequences; 1,150,108,890 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq1287 127 2e-24 seq1631 84.2 2e-11 >seq1287 Length=463317 Score = 127 bits (140), Expect = 2e-24 Identities = 157/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 ||||| || ||| |||| || | || || ||||| ||||| ||| || || || Sbjct 103004 ATGCAGATCTTCGTCAAGACTCTAACCGGTAAAACAATTACATTAGAAGTTGAGCCTTCA 102945 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | || ||||| |||||| ||||||||||| | || ||| ||| Sbjct 102944 GACACAATTGAAAATGTTAAGGCCAAAATTCAAGATAAAGAAGGAATTCCACCAGACCAA 102885 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 |||||||| || ||||| ||||||||||| |||||| | || || | ||||||||| Sbjct 102884 CAAAGACTGATTTTTGCTGGCAAACAACTAGAAGATGGCCGTACCTTGTCAGATTACAAT 102825 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACG 29176 || |||||||||||||||||||| |||| ||||| Sbjct 102824 ATCCAGAAGGAATCTACTCTTCATCTGGTCTTACG 102790 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 |||||||| || | ||||| | || ||||| || || || ||| ||||| || Sbjct 100724 ATGCAAATTTTTGTTAAAACTCTTACCGGCAAGACAATCACGCTGGAAGTTGAACCTTCA 100665 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | || | ||| |||||| ||||||||||| | || ||||||| Sbjct 100664 GATACCATTGAAAATGTGAAGGCTAAAATTCAGGATAAAGAAGGAATTCCACCAGATCAA 100605 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 ||| | | || ||||| || |||||||| |||||| | ||| | | |||||||| Sbjct 100604 CAACGTTTGATTTTTGCTGGAAAACAACTCGAAGATGGCCGAACCCTTTCTGATTACAAC 100545 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 ||||||||||||||||||||||| |||| | || || |||| || Sbjct 100544 ATTCAGAAGGAATCTACTCTTCATTTGGTCCTGCGTTTGAGAGGTGG 100498 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 28961 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 29020 ||||||||| || |||| ||| | || || ||||||||||| ||| |||||| | Sbjct 101865 AATGCAAATTTTTGTCAAGACACTAACAGGAAAAACCATTACATTAGAAGTGGAACCTTC 101806 Query 29021 AGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 29080 || || | | || |||| |||||| ||||||||||| | || |||||| Sbjct 101805 TGACACTATTGAAAATGTTAAAGCTAAAATTCAGGATAAAGAAGGAATTCCGCCAGATCA 101746 Query 29081 ACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAA 29140 ||||| || |||||||| || ||||| |||||||| || | | |||||||| Sbjct 101745 GCAAAGGCTGATCTTTGCAGGAAAACAGTTGGAAGATGGACGCACCCTTTCTGATTACAA 101686 Query 29141 TATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 |||||| || ||||| || || || | || | ||| | || ||||| Sbjct 101685 TATTCAAAAAGAATCCACACTGCATCTTGTACTTCGACTTCGTGGAGG 101638 Score = 93.3 bits (102), Expect = 4e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 28961 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 29020 ||||||||| || | ||||| || || || ||||| || || ||| ||||| | Sbjct 100269 AATGCAAATTTTTGTTAAAACTTTAACCGGAAAAACAATCACACTAGAAGTAGAACCTTC 100210 Query 29021 AGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 29080 || || | | || |||| |||||| ||||||||||| | || ||||| Sbjct 100209 TGACACTATTGAAAATGTTAAAGCTAAAATTCAGGATAAAGAAGGAATTCCACCGGATCA 100150 Query 29081 ACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAA 29140 || |||||||| ||||| || |||||||| |||||| | ||| || | |||||||| Sbjct 100149 GCAGAGACTTATTTTTGCTGGGAAACAACTTGAAGATGGCCGAACCTTGTCTGATTACAA 100090 Query 29141 TATTCAGAAGGAATCTACTCTTCA 29164 || ||||||||||| || || || Sbjct 100089 CATCCAGAAGGAATCAACCCTGCA 100066 Score = 93.3 bits (102), Expect = 4e-14 Identities = 141/199 (71%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 |||||||| ||| | ||||| || || ||||| ||||| ||| ||| ||||| || Sbjct 101180 ATGCAAATTTTCGTTAAAACTTTAACCGGCAAGACCATCACCCTGGAAGTTGAACCTTCA 101121 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | || ||||| |||||| ||||||||||| | || |||||| Sbjct 101120 GATACCATTGAAAATGTTAAGGCTAAAATTCAGGATAAAGAAGGAATTCCACCTGATCAA 101061 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGAT--TCCAAAACTATGGCCGATTACA 29139 || ||| | || ||||| || |||||||| |||||| || | || | ||||||| | Sbjct 101060 CAGAGATTAATTTTTGCTGGTAAACAACTAGAAGATGGTCGTACCCTCT--CCGATTATA 101003 Query 29140 ATATTCAGAAGGAATCTAC 29158 |||| || || ||||| || Sbjct 101002 ATATCCAAAAAGAATCCAC 100984 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 28959 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 29018 || ||||| || ||| |||| ||| | || |||||||| ||||| ||| || || Sbjct 103463 AAGATGCAGATCTTCGTCAAGACACTTACCGGCAAAACAATTACATTAGAAGTTGAGCCT 103404 Query 29019 GCAGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 29078 | || || | | || ||||| |||||| || |||||||| | ||| ||| Sbjct 103403 TCTGACACAATAGAAAATGTTAAGGCCAAAATTCAAGACAAAGAAGGAATTCCCCCAGAC 103344 Query 29079 CAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTAC 29138 ||||| ||| | || ||||| || || || || |||||| | || | | ||||| Sbjct 103343 CAACAGAGATTAATTTTTGCTGGAAAGCAGCTTGAAGATGGCCGCACACTTTCAGATTAT 103284 Query 29139 AATATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 ||||||||||| |||||||| | || ||||| | || | ||||||| Sbjct 103283 AATATTCAGAAAGAATCTACATTACATTTGGTGCTTCGTCTGAGAGGAGG 103234 >seq1631 Length=286364 Score = 84.2 bits (92), Expect = 2e-11 Identities = 132/189 (70%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 28961 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 29020 |||||| || ||| | || || | ||||| |||||||||||| || |||||| | Sbjct 118981 AATGCAGATCTTCGTTAAGACCCTCACGGGTAAAACCATTACCCTAGAGGTAGAACCCTC 119040 Query 29021 AGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 29080 || || | | || | || |||||| || |||||||| | || |||||| Sbjct 119041 TGATACTATCGAAAATGTGAAAGCTAAAATTCAAGACAAAGAAGGAATACCTCCAGATCA 119100 Query 29081 ACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAA 29140 ||| || ||||| ||||| || |||||| |||||||| | |||| | | |||||||| Sbjct 119101 ACAGAGGCTTATTTTTGCTGGTAAACAATTGGAAGATGGAAGAACTCTCTCTGATTACAA 119160 Query 29141 TATTCAGAA 29149 ||| || || Sbjct 119161 TATACAAAA 119169 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428272478842040