Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Halyomorpha_20halys_20[refseq_20GCF_5F000696795.1_202014-06-03] 12,168 sequences; 1,150,108,890 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq1287 109 5e-19 >seq1287 Length=463317 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || |||||||||| || || | ||| | ||||||||| |||||||| ||||| || | Sbjct 102094 CCACCTCGCAGCCGCAGTACAAGATGAAGAGTGGACTCTTTTTGAATATTATAATCTGAA 102153 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 |||||| | | || || || ||||| || ||| |||| | | ||||||||| ||| Sbjct 102154 AGGGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAAATTAAACGCTGCTGGTCAGGGGGT 102213 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||| || || || || ||| || | | | ||| ||| || || | Sbjct 102214 ATTCCTTCTTTATCTTGAATTTTCGCTTTGACATTTTCAATAGTGTCAGATGGTTCAACT 102273 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176 |||| || || ||||||||||| | ||||| ||||||||||||||| Sbjct 102274 TCCAGCGTGATTGTCTTGCCGGTAAGAGTTTTAACAAATATTTGCATT 102321 Score = 91.5 bits (100), Expect = 1e-13 Identities = 143/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 20972 ATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTG 21031 ||||| || || ||||| || ||||| || || | || |||| || | || || || || Sbjct 100065 ATGCAGGGTTGATTCCTTCTGGATGTTGTAATCAGACAAGGTTCGGCCATCTTCAAGTTG 100124 Query 21032 TTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTT 21091 ||| || ||| |||||||||||||||| ||| || | ||||| || || || || Sbjct 100125 TTTCCCAGCAAAAATAAGTCTCTGCTGATCCGGTGGAATTCCTTCTTTATCCTGAATTTT 100184 Query 21092 TTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGT 21151 ||| || | | | ||| ||| || || ||| | || || || || ||||| Sbjct 100185 AGCTTTAACATTTTCAATAGTGTCAGAAGGTTCTACTTCTAGTGTGATTGTTTTTCCGGT 100244 Query 21152 TAACGTTTTGACAAATATTTGCATT 21176 ||| ||||| ||||| ||||||||| Sbjct 100245 TAAAGTTTTAACAAAAATTTGCATT 100269 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023 || || | ||| || ||||| ||||||||||| || || || | |||||| || | || Sbjct 100741 AGTACAAGATGTAAGGTGGATTCCTTTTGAATATTGTAATCTGAAAGGGTTCGGCCATCT 100800 Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083 || ||||| || || ||| |||| | |||||| || ||| || | ||||| || || Sbjct 100801 TCAAGCTGCTTTCCAGCAAAAATCAATCTCTGTTGATCCGGTGGAATTCCTTCTTTATCC 100860 Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143 || || ||| || | | | ||||||| ||||| ||||| || || ||| Sbjct 100861 TGAATTTTGGCTTTAACGTTCTCAATAGTATCAGATGGCTCAACTTCCAAAGTGATAGTC 100920 Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || || || | ||||| ||||| |||||||| Sbjct 100921 TTTCCAGTGAGAGTTTTAACAAAAATTTGCAT 100952 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422196580016288