Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Halyomorpha_20halys_20[refseq_20GCF_5F000696795.1_202014-06-03] 12,168 sequences; 1,150,108,890 total letters Query= NC_001962.1 Length=128413 Score E Sequences producing significant alignments: (Bits) Value seq1287 113 4e-20 seq1631 93.3 3e-14 >seq1287 Length=463317 Score = 113 bits (124), Expect = 4e-20 Identities = 154/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 ||||| || ||| |||| || | || || ||||| ||||| ||| || || || Sbjct 103004 ATGCAGATCTTCGTCAAGACTCTAACCGGTAAAACAATTACATTAGAAGTTGAGCCTTCA 102945 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | || | ||| |||||| ||||||||||| | || ||| ||| Sbjct 102944 GACACAATTGAAAATGTTAAGGCCAAAATTCAAGATAAAGAAGGAATTCCACCAGACCAA 102885 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 |||||||| || ||||| ||||||||| | |||||| | || || | ||||||||| Sbjct 102884 CAAAGACTGATTTTTGCTGGCAAACAACTAGAAGATGGCCGTACCTTGTCAGATTACAAT 102825 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACG 25249 || || ||||||||||||||||| |||| ||||| Sbjct 102824 ATCCAGAAGGAATCTACTCTTCATCTGGTCTTACG 102790 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 25034 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 25093 ||||||||| || |||| ||| | || || ||||||||||| ||| |||||| | Sbjct 101865 AATGCAAATTTTTGTCAAGACACTAACAGGAAAAACCATTACATTAGAAGTGGAACCTTC 101806 Query 25094 AGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 25153 || || | | || | || |||||| ||||||||||| | || |||||| Sbjct 101805 TGACACTATTGAAAATGTTAAAGCTAAAATTCAGGATAAAGAAGGAATTCCGCCAGATCA 101746 Query 25154 ACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAA 25213 ||||| || |||||||| || ||||| ||||||||| || | | |||||||| Sbjct 101745 GCAAAGGCTGATCTTTGCAGGAAAACAGTTGGAAGATGGACGCACCCTTTCTGATTACAA 101686 Query 25214 TATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 ||||||||| ||||| || || || | || | ||| | || ||||| Sbjct 101685 TATTCAAAAAGAATCCACACTGCATCTTGTACTTCGACTTCGTGGAGG 101638 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| || | ||||| | || ||||| || || || ||| ||||| || Sbjct 100724 ATGCAAATTTTTGTTAAAACTCTTACCGGCAAGACAATCACGCTGGAAGTTGAACCTTCA 100665 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | || | ||| |||||| ||||||||||| | || ||||||| Sbjct 100664 GATACCATTGAAAATGTGAAGGCTAAAATTCAGGATAAAGAAGGAATTCCACCAGATCAA 100605 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 ||| | | || ||||| || |||||| | |||||| | ||| | | |||||||| Sbjct 100604 CAACGTTTGATTTTTGCTGGAAAACAACTCGAAGATGGCCGAACCCTTTCTGATTACAAC 100545 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 ||||| ||||||||||||||||| |||| | || || |||| || Sbjct 100544 ATTCAGAAGGAATCTACTCTTCATTTGGTCCTGCGTTTGAGAGGTGG 100498 Score = 87.8 bits (96), Expect = 1e-12 Identities = 140/199 (70%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| ||| | ||||| || || ||||| ||||| ||| ||| ||||| || Sbjct 101180 ATGCAAATTTTCGTTAAAACTTTAACCGGCAAGACCATCACCCTGGAAGTTGAACCTTCA 101121 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | || | ||| |||||| ||||||||||| | || |||||| Sbjct 101120 GATACCATTGAAAATGTTAAGGCTAAAATTCAGGATAAAGAAGGAATTCCACCTGATCAA 101061 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGAT--TCCAAAACTATGGCCGATTACA 25212 || ||| | || ||||| || |||||| | |||||| || | || | ||||||| | Sbjct 101060 CAGAGATTAATTTTTGCTGGTAAACAACTAGAAGATGGTCGTACCCTCT--CCGATTATA 101003 Query 25213 ATATTCAAAAGGAATCTAC 25231 |||| ||||| ||||| || Sbjct 101002 ATATCCAAAAAGAATCCAC 100984 >seq1631 Length=286364 Score = 93.3 bits (102), Expect = 3e-14 Identities = 134/189 (71%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 25034 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 25093 |||||| || ||| | || || | ||||| |||||||||||| || |||||| | Sbjct 118981 AATGCAGATCTTCGTTAAGACCCTCACGGGTAAAACCATTACCCTAGAGGTAGAACCCTC 119040 Query 25094 AGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 25153 || || | | || | || |||||| || |||||||| | || |||||| Sbjct 119041 TGATACTATCGAAAATGTGAAAGCTAAAATTCAAGACAAAGAAGGAATACCTCCAGATCA 119100 Query 25154 ACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAA 25213 ||| || ||||| ||||| || ||||||||||||||| | |||| | | |||||||| Sbjct 119101 ACAGAGGCTTATTTTTGCTGGTAAACAATTGGAAGATGGAAGAACTCTCTCTGATTACAA 119160 Query 25214 TATTCAAAA 25222 ||| ||||| Sbjct 119161 TATACAAAA 119169 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 410735879861552