Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Halyomorpha_20halys_20[refseq_20GCF_5F000696795.1_202014-06-03] 12,168 sequences; 1,150,108,890 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq1287 100 3e-16 >seq1287 Length=463317 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 ||||||||| || || ||||| | || || ||||| ||||| | || || ||| | | Sbjct 100269 AATGCAAATTTTTGTTAAAACTTTAACCGGAAAAACAATCACACTAGAAGTAGAACCTTC 100210 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | ||| | || | ||||||| || ||||| || || || |||| || Sbjct 100209 TGACACTATTGAAAATGTTAAAGCTAAAATTCAGGATAAAGAAGGAATTCCACCGGATCA 100150 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| |||| || | || || ||||| || || || | || ||| | || ||||| Sbjct 100149 GCAGAGACTTATTTTTGCTGGGAAACAACTTGAAGATGGCCGAACCTTGTCTGATTACAA 100090 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||||||| | || |||||| |||| ||||| | |||||||| Sbjct 100089 CATCCAGAAGGAATCAACCCTGCATTTAGTTTTGCGTCTTAGGGGCGG 100042 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||||||||| || ||||| || || ||||| || ||||| | || || ||| | | Sbjct 102321 AATGCAAATATTTGTTAAAACTCTTACCGGCAAGACAATCACGCTGGAAGTTGAACCATC 102262 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | ||| |||| | ||||||| || ||||| || || ||| | ||||| Sbjct 102261 TGACACTATTGAAAATGTCAAAGCGAAAATTCAAGATAAAGAAGGAATACCCCCTGACCA 102202 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || | || | || || ||||| || || || | ||| ||||| || || || Sbjct 102201 GCAGCGTTTAATTTTTGCTGGAAAACAACTTGAAGATGGGCGAACCCTTTCAGATTATAA 102142 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 || || || ||| |||| || ||||| || |||| Sbjct 102141 TATTCAAAAAGAGTCCACTCTTCATCTTGTACTGCG 102106 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515140835159680