Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Halyomorpha_20halys_20[refseq_20GCF_5F000696795.1_202014-06-03] 12,168 sequences; 1,150,108,890 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq1287 116 3e-21 >seq1287 Length=463317 Score = 116 bits (128), Expect = 3e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||||||||| || || ||||| || || || ||| ||||| ||||||||| Sbjct 101212 GTGGACTCTTTTTGTATATTATAATCTGACAGGGTTCGGCCATCTTCGAGTTGTTTTCCA 101271 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 ||| |||| | ||||||||| || ||||| || || || || ||| |||||| ||| Sbjct 101272 GCGAAGATCAAACGCTGCTGGTCAGGAGGAATTCCTTCTTTATCTTGAATTTTAGCCTTA 101331 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | ||||| |||||| | ||| || || | || | |||||| || || ||||| Sbjct 101332 ACATTTTCGATGGTGTCTGAAGGCTCAACTTCTAATGTAATCGTTTTACCAGTTAGAGTC 101391 Query 118722 TTTACAAAAATCTGCAT 118738 || || || |||||||| Sbjct 101392 TTGACGAAGATCTGCAT 101408 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571 || || ||||| | || || || || | ||||| |||||||||||||| ||||| Sbjct 102322 CCACCACGTAAACGCAGGACTAAATGAAGAGTAGATTCTTTTTGAATGTTATAATCAGAA 102381 Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631 | ||| || ||| || ||||| |||||||| | || | | ||| ||||| ||||| Sbjct 102382 AGAGTACGTCCATCTTCAAGCTGCTTTCCAGCAAAAATCAATCTCTGTTGATCAGGAGGG 102441 Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691 || || ||||| ||| || ||| || || | ||| | || || | || || Sbjct 102442 ATACCTTCCTTATCTTGGATCTTTGCCTTCACATTTTCAATAGTATCTGAAGGTTCAACT 102501 Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || | || | |||||||| ||||||||||| |||||||||||||| Sbjct 102502 TCCAGTGTGATTGTTTTGCCAGTCAGAGTTTTAACAAAAATCTGCAT 102548 Score = 102 bits (112), Expect = 7e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || |||||||||||||| || ||||| | || ||| ||| || || ||||||||| Sbjct 102124 GTGGACTCTTTTTGAATATTATAATCTGAAAGGGTTCGCCCATCTTCAAGTTGTTTTCCA 102183 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 || | || | ||||||||| || || ||||| || || || ||| |||||| ||| Sbjct 102184 GCAAAAATTAAACGCTGCTGGTCAGGGGGTATTCCTTCTTTATCTTGAATTTTCGCTTTG 102243 Query 118662 ACCTGTTCGACGGTGTCCG-TGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGT 118720 || | ||| | ||||| | || | || || || | || | || |||||||| ||||| Sbjct 102244 ACATTTTCAATAGTGTCAGATGGT-TCAACTTCCAGCGTGATTGTCTTGCCGGTAAGAGT 102302 Query 118721 TTTTACAAAAATCTGCAT 118738 ||| ||||| || ||||| Sbjct 102303 TTTAACAAATATTTGCAT 102320 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 ||||| ||||| |||||||||||||| | ||| || ||| || ||||| |||||| Sbjct 102580 GTAGATTCTTTCTGAATGTTGTAATCTGAAAGAGTACGGCCATCTTCAAGCTGCTTTCCA 102639 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 || | || | | ||| || || ||||| || || || |||||| |||||| || Sbjct 102640 GCAAATATTAATCTCTGTTGGTCTGGAGGGATTCCTTCTTTGTCTTGAATTTTAGCCTTG 102699 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | ||||| ||||| | ||| || || | || | ||||| || || | |||| Sbjct 102700 ACATTTTCGATTGTGTCAGAAGGCTCAACTTCCAATGTAATTGTTTTACCAGTTAAAGTT 102759 Query 118722 TTTACAAAAATCTGCAT 118738 || |||||||| ||||| Sbjct 102760 TTAACAAAAATTTGCAT 102776 Score = 93.3 bits (102), Expect = 4e-14 Identities = 149/212 (70%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGT--ATCC 118586 |||||| || | |||||| ||||| ||||| || ||||| | | |||| ||| ||| Sbjct 103251 CACCAAATGTAATGTAGATTCTTTCTGAATATTATAATC--TGAAAGTGTGCGGCCATCT 103308 Query 118587 TCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCT 118646 || ||||| |||||||| | || | | ||| || || || || || || || |||||| Sbjct 103309 TCAAGCTGCTTTCCAGCAAAAATTAATCTCTGTTGGTCTGGGGGAATTCCTTCTTTGTCT 103368 Query 118647 GTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTT 118706 |||||| ||||| | ||| | ||||| | ||| || || | || | ||| Sbjct 103369 TGAATTTTGGCCTTAACATTTTCTATTGTGTCAGAAGGCTCAACTTCTAATGTAATTGTT 103428 Query 118707 TTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||||||| || || || || || |||||||| Sbjct 103429 TTGCCGGTAAGTGTCTTGACGAAGATCTGCAT 103460 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 ||||| || | ||||| || || |||||||||||||| | || || ||| ||| Sbjct 100516 ACCAAATGAAGAGTAGATTCCTTCTGAATGTTGTAATCAGAAAGGGTTCGGCCATCTTCG 100575 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 || ||||||||||| | || | ||| || ||||| || || || || || || || | Sbjct 100576 AGTTGTTTTCCAGCAAAAATCAAACGTTGTTGATCTGGTGGAATTCCTTCTTTATCCTGA 100635 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 ||||| || || | ||| | ||| || | || || || | || | || ||| Sbjct 100636 ATTTTAGCCTTCACATTTTCAATGGTATCTGAAGGTTCAACTTCCAGCGTGATTGTCTTG 100695 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||| |||||||| |||||||| ||||| Sbjct 100696 CCGGTAAGAGTTTTAACAAAAATTTGCAT 100724 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 ||||||| || | || | || | || | ||| || ||||||||||| |||||||| Sbjct 101636 TACCTCCACGAAGTCGAAGTACAAGATGCAGTGTGGATTCTTTTTGAATATTGTAATCAG 101695 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | ||||| ||| || | ||||||||| || |||| || | |||||||| || | Sbjct 101696 AAAGGGTGCGTCCATCTTCCAACTGTTTTCCTGCAAAGATCAGCCTTTGCTGATCTGGCG 101755 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || || || || || |||||| |||||| | ||| | ||||| | || | Sbjct 101756 GAATTCCTTCTTTATCCTGAATTTTAGCTTTAACATTTTCAATAGTGTCAGAAGGTTCCA 101815 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | || | || | ||||| || || || || || |||||||| ||||| Sbjct 101816 CTTCTAATGTAATGGTTTTTCCTGTTAGTGTCTTGACAAAAATTTGCAT 101864 Score = 82.4 bits (90), Expect = 7e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585 ||| || || || | || || || || || ||||||||||| || || || ||| Sbjct 100056 CAAAACTAAATGCAGGGTTGATTCCTTCTGGATGTTGTAATCAGACAAGGTTCGGCCATC 100115 Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645 || || ||||| ||||| | || || | ||||||||| || || || || || || || Sbjct 100116 TTCAAGTTGTTTCCCAGCAAAAATAAGTCTCTGCTGATCCGGTGGAATTCCTTCTTTATC 100175 Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705 |||||| |||||| | ||| | ||||| | || || || | || | || Sbjct 100176 CTGAATTTTAGCTTTAACATTTTCAATAGTGTCAGAAGGTTCTACTTCTAGTGTGATTGT 100235 Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||| ||||| | |||||| |||||||| ||||| Sbjct 100236 TTTTCCGGTTAAAGTTTTAACAAAAATTTGCAT 100268 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433766064036256