Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Halyomorpha_20halys_20[refseq_20GCF_5F000696795.1_202014-06-03] 12,168 sequences; 1,150,108,890 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq53 123 2e-23 >seq53 Length=1573976 Score = 123 bits (136), Expect = 2e-23 Identities = 177/248 (71%), Gaps = 1/248 (0%) Strand=Plus/Minus Query 16235 CAAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGA 16294 |||| || || |||| | ||| | || || | | ||| | ||| |||||||| ||||| Sbjct 796345 CAAGTAATATAACAA-GTAATACCTCATCTCGAGATATGAGCTCATTTGAAAAGGTAAGT 796287 Query 16295 CCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAAT 16354 |||||||| || |||| || |||| |||||| ||||| ||||| || ||||||||||| Sbjct 796286 CCTGGCATGAGACCTCTCTTCTTAAGCCAAAAAATAGCAGCAAAGGAGCCAGAAAAGAAA 796227 Query 16355 ATACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAtttttactttct 16414 || |||||||| || ||||| || || | || |||||| | || | ||| Sbjct 796226 ATTCCTTCAACAGCAGCAAACGCTACTATTCTCTCACCAAAAGTGGCCGTGGGACTGGAG 796167 Query 16415 atccattttttagcccaatttgctttttgtttAACACAGTTCATGTTCTCTATTGCATTA 16474 ||||| ||||||| || || | |||||||| | |||| | || || ||||| Sbjct 796166 ATCCAAGAAAGTGCCCAATCAGCCTTCTTCTTAACACACTCCATGGTTTCGATGGCATTG 796107 Query 16475 AATAAATA 16482 |||||||| Sbjct 796106 AATAAATA 796099 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462441651924800