Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Halyomorpha_20halys_20[refseq_20GCF_5F000696795.1_202014-06-03] 12,168 sequences; 1,150,108,890 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq1287 87.8 1e-12 >seq1287 Length=463317 Score = 87.8 bits (96), Expect = 1e-12 Identities = 158/230 (69%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 ||||||||||| | | ||||| || || || ||||||||||||||||| || Sbjct 100498 CCACCTCTCAAACGCAGGACCAAATGAAGAGTAGATTCCTTCTGAATGTTGTAATCAGAA 100557 Query 45170 AG---TTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGA 45226 || | ||| ||| ||| ||||||||||| || || ||||| || ||||| || || Sbjct 100558 AGGGTTCGGCCATCTTCG---AGTTGTTTTCCAGCAAAAATCAAACGTTGTTGATCTGGT 100614 Query 45227 GGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCC 45286 || | || || || ||| |||||| ||| || | | | | || | || Sbjct 100615 GGAATTCCTTCTTTATCCTGAATTTTAGCCTTCACATTTTCAATGGTATCTGAAGGTTCA 100674 Query 45287 ACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || |||| || || |||||||| || ||||| || ||||| |||||||| Sbjct 100675 ACTTCCAGCGTGATTGTCTTGCCGGTAAGAGTTTTAACAAAAATTTGCAT 100724 Score = 82.4 bits (90), Expect = 6e-11 Identities = 157/230 (68%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 ||||||| || | | ||| | || || ||| ||| || || || || || || | Sbjct 101182 CCACCTCGCAGCCGCAGTACAAGATGAAGAGTGGACTCTTTTTGTATATTATAATCTGAC 101241 Query 45170 AG---TTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGA 45226 || | ||| ||| ||| ||||||||||| ||||| ||||| ||||| ||||| ||| Sbjct 101242 AGGGTTCGGCCATCTTCG---AGTTGTTTTCCAGCGAAGATCAAACGCTGCTGGTCAGGA 101298 Query 45227 GGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCC 45286 || | || || || || |||||| |||||| | | | |||| | ||| Sbjct 101299 GGAATTCCTTCTTTATCTTGAATTTTAGCCTTAACATTTTCGATGGTGTCTGAAGGCTCA 101358 Query 45287 ACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || | |||||||| || || || |||||||| || ||||| ||||| Sbjct 101359 ACTTCTAATGTAATCGTTTTACCAGTTAGAGTCTTGACGAAGATCTGCAT 101408 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395016611335528