Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Halyomorpha_20halys_20[refseq_20GCF_5F000696795.1_202014-06-03] 12,168 sequences; 1,150,108,890 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq53 125 7e-24 >seq53 Length=1573976 Score = 125 bits (138), Expect = 7e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 14226 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 14285 ||||||||| | || || || |||||||| || | ||||||||| | |||| || | Sbjct 796324 CCTCATCTCGAGATATGAGCTCATTTGAAAAGGTAAGTCCTGGCATGAGACCTCTCTTCT 796265 Query 14286 ttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 14345 | | |||||| || ||||| || || || |||||||| ||||| ||||| |||||||||| Sbjct 796264 TAAGCCAAAAAATAGCAGCAAAGGAGCCAGAAAAGAAAATTCCTTCAACAGCAGCAAACG 796205 Query 14346 CTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTCAG 14405 ||| || || || ||||| | || | | || ||||| ||||| |||| Sbjct 796204 CTACTATTCTCTCACCAAAAGTGGCCGTGGGACTGGAGATCCAAGAAAGTGCCCAATCAG 796145 Query 14406 AtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATGTTC 14454 || || |||| | | ||||| ||||| || ||||| ||||||| ||| Sbjct 796144 CCTTCTTCTTAACACACTCCATGGTTTCGATGGCATTGAATAAATATTC 796096 Score = 84.2 bits (92), Expect = 2e-11 Identities = 69/84 (82%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 14473 AATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTG 14532 ||| || |||||||| || | ||| ||||| ||||| || | |||||||||||| || || Sbjct 794338 AATATAAGTATCAATGAGCAGGCTGTACATCTCAGAATGCACGTTTTCCATAGCAATTTG 794279 Query 14533 AAAACCATAAAAACATCTAGCTTC 14556 |||||| || ||||| |||||||| Sbjct 794278 AAAACCGTAGAAACACCTAGCTTC 794255 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482272235234240