Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Halyomorpha_20halys_20[refseq_20GCF_5F000696795.1_202014-06-03] 12,168 sequences; 1,150,108,890 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq1287 118 8e-22 >seq1287 Length=463317 Score = 118 bits (130), Expect = 8e-22 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 ||||| || |||| |||||| | || ||||| |||||||||||||| ||||| || | Sbjct 101638 CCTCCACGAAGTCGAAGTACAAGATGCAGTGTGGATTCTTTTTGAATATTGTAATCAGAA 101697 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | || | ||||||||| ||||| || ||| |||| || ||||| ||||| || Sbjct 101698 AGGGTGCGTCCATCTTCCAACTGTTTTCCTGCAAAGATCAGCCTTTGCTGATCTGGCGGA 101757 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGT 18277 | ||||| ||||| ||||| | || || || | | ||| ||||||| || || Sbjct 101758 ATTCCTTCTTTATCCTGAATTT-TAGCTTTAACATTTTCAATAGTGTCAGAAGGTTCCAC 101816 Query 18278 TTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326 ||| | || ||| |||| || || | ||| || ||||||||||||||| Sbjct 101817 TTCTAATGTAATGGTTTTTCCTGTTAGTGTCTTGACAAAAATTTGCATT 101865 Score = 111 bits (122), Expect = 1e-19 Identities = 149/205 (73%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 18123 TGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGT 18182 || || |||||||| || || |||||||| || | || ||| | |||||| | |||| Sbjct 100066 TGCAGGGTTGATTCCTTCTGGATGTTGTAATCAGACAAGGTTCGGCCATCTTCAAGTTGT 100125 Query 18183 TTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTGT 18242 || || ||| | |||||||| || |||||| || | ||||| ||||| ||||| | Sbjct 100126 TTCCCAGCAAAAATAAGTCTCTGCTGATCCGGTGGAATTCCTTCTTTATCCTGAATTT-T 100184 Query 18243 TGCTTGACC-TGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGT 18301 |||| | | | | ||| ||||||| || || ||| | ||||| |||| ||||| Sbjct 100185 AGCTTTAACATTTTCAATAGTGTCAGAAGGTTCTACTTCTAGTGTGATTGTTTTTCCGGT 100244 Query 18302 CAATGTTTTTACAAAAATTTGCATT 18326 || ||||| ||||||||||||||| Sbjct 100245 TAAAGTTTTAACAAAAATTTGCATT 100269 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 || || || || | ||| || | || | ||| ||||||||||| || || || |||| Sbjct 100954 CCACCTCGCAGACGAAGAACAAGATGTAATGTGGATTCTTTTTGGATATTATAATCGGAG 101013 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | || || |||||| | |||||| || ||| | || | ||| |||||||| || Sbjct 101014 AGGGTACGACCATCTTCTAGTTGTTTACCAGCAAAAATTAATCTCTGTTGATCAGGTGGA 101073 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278 | ||||| ||||| ||||| ||| || | | ||| || || || || | Sbjct 101074 ATTCCTTCTTTATCCTGAATTTTAGCCTTAACATTTTCAATGGTATCTGAAGGTTCAACT 101133 Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 || | ||||||| | |||||||| || ||||| || ||||||||||| Sbjct 101134 TCCAGGGTGATGGTCTTGCCGGTTAAAGTTTTAACGAAAATTTGCAT 101180 Score = 87.8 bits (96), Expect = 1e-12 Identities = 159/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157 |||||| | || | |||||| | || | ||||||||| ||||| || || || || | Sbjct 100269 TCCTCCTCTCAGACGAAGTACAAGATGCAATGTTGATTCCTTTTGGATATTATAATCAGA 100328 Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217 | || | |||||| ||||||||||| ||| | || | ||| || ||||| || Sbjct 100329 GAGGGTGCGCCCATCTTCTAATTGTTTGCCAGCAAAAATCAATCTCTGCTGATCTGGAGG 100388 Query 18218 CACGCCTTCCTTATCGGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGG 18276 | ||||||||||| ||||| | || || || | | ||| ||| || || || Sbjct 100389 AATTCCTTCCTTATCCTGAATTT-TAGCTTTAACGTTTTCAATAGTATCTGATGGTTCAA 100447 Query 18277 TTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326 ||| | || || |||| || || || ||||| ||||||||||||||| Sbjct 100448 CTTCCAATGTAATTGTTTTCCCAGTTAAAGTTTTAACAAAAATTTGCATT 100497 Score = 82.4 bits (90), Expect = 6e-11 Identities = 148/214 (69%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 18114 AGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCT 18173 ||||| | ||||| || || ||||||||||| || || || | | ||| | |||| Sbjct 102109 AGTACAAGATGAAGAGTGGACTCTTTTTGAATATTATAATCTGAAAGGGTTCGCCCATCT 102168 Query 18174 TCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCG 18233 || | |||||| || ||| | || | | || || || ||| | ||||| ||||| Sbjct 102169 TCAAGTTGTTTTCCAGCAAAAATTAAACGCTGCTGGTCAGGGGGTATTCCTTCTTTATCT 102228 Query 18234 GCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCT 18292 ||||| | || ||||| | | ||| ||||||| || || ||| | ||||| | Sbjct 102229 TGAATTT-TCGCTTTGACATTTTCAATAGTGTCAGATGGTTCAACTTCCAGCGTGATTGT 102287 Query 18293 TTTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326 |||||||| | ||||| ||||| ||||||||| Sbjct 102288 CTTGCCGGTAAGAGTTTTAACAAATATTTGCATT 102321 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379287744233160