Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Halyomorpha_20halys_20[refseq_20GCF_5F000696795.1_202014-06-03] 12,168 sequences; 1,150,108,890 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq1287 104 2e-17 >seq1287 Length=463317 Score = 104 bits (114), Expect = 2e-17 Identities = 162/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891 ||||| |||||||||||||| | |||||||| || || || | || || ||| | Sbjct 102320 ATGCAAATATTTGTTAAAACTCTTACCGGCAAGACAATCACGCTGGAAGTTGAACCATCT 102261 Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951 |||| | | |||| ||| || | |||||| | |||||||| |||| ||||||| Sbjct 102260 GACACTATTGAAAATGTCAAAGCGAAAATTCAAGATAAAGAAGGAATACCCCCTGACCAG 102201 Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGAT--TCCATGACTATGAACGATTACA 25009 || |||||||| | ||| || |||||||| |||||| | | || | | ||||| | Sbjct 102200 CAGCGTTTAATTTTTGCTGGAAAACAACTTGAAGATGGGCGAACCCTTTCA--GATTATA 102143 Query 25010 GCATACAGAAAGAGGCCACGCTTCATTTAGTGTTACGATTGCGCGGAGGT 25059 || || |||||| |||| |||||| | || | || |||| || ||| Sbjct 102142 ATATTCAAAAAGAGTCCACTCTTCATCTTGTACTGCGGCTGCGAGGTGGT 102093 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891 ||||| || ||||||||||| |||||||| ||||| || || | || || ||| | Sbjct 100268 ATGCAAATTTTTGTTAAAACTTTAACCGGAAAAACAATCACACTAGAAGTAGAACCTTCT 100209 Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951 |||| | | |||| |||||| | |||||| | |||||||| | || || ||| Sbjct 100208 GACACTATTGAAAATGTTAAAGCTAAAATTCAGGATAAAGAAGGAATTCCACCGGATCAG 100149 Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAGC 25011 || | | || | ||| || |||||||| |||||| | || || ||||||| | Sbjct 100148 CAGAGACTTATTTTTGCTGGGAAACAACTTGAAGATGGCCGAACCTTGTCTGATTACAAC 100089 Query 25012 ATACAGAAAGAGGCCACGCTTCATTTAGTGTTACG 25046 || ||||| || | || || |||||||| || || Sbjct 100088 ATCCAGAAGGAATCAACCCTGCATTTAGTTTTGCG 100054 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418241966562560