Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Halyomorpha_20halys_20[refseq_20GCF_5F000696795.1_202014-06-03] 12,168 sequences; 1,150,108,890 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq1287 132 4e-26 seq53 95.1 1e-14 seq2523 82.4 7e-11 >seq1287 Length=463317 Score = 132 bits (146), Expect = 4e-26 Identities = 169/231 (73%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| || || || ||||| || ||||| || ||||| | || |||||||| || Sbjct 102320 ATGCAAATATTTGTTAAAACTCTTACCGGCAAGACAATCACGCTGGAAGTTGAACCATCT 102261 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | | |||| |||||| || ||| || || ||||| | || || |||||| Sbjct 102260 GACACTATTGAAAATGTCAAAGCGAAAATTCAAGATAAAGAAGGAATACCCCCTGACCAG 102201 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA--CTCTATGACTATGAGCGATTATA 31370 |||||| |||| || ||||| ||||| | ||||| | | || | | ||||||| Sbjct 102200 CAGCGTTTAATTTTTGCTGGAAAACAACTTGAAGATGGGCGAACCCTTTCA--GATTATA 102143 Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 | ||||||||||| || ||||||||||| ||||| | ||| | || |||| Sbjct 102142 ATATTCAAAAAGAGTCCACTCTTCATCTTGTACTGCGGCTGCGAGGTGGTA 102092 Score = 120 bits (132), Expect = 3e-22 Identities = 166/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||||||||| || ||||| || ||||| ||||| || || | || || ||||| || Sbjct 101864 ATGCAAATTTTTGTCAAGACACTAACAGGAAAAACCATTACATTAGAAGTGGAACCTTCT 101805 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | | |||| || ||| | ||| ||| || ||||| | ||||| || ||| Sbjct 101804 GACACTATTGAAAATGTTAAAGCTAAAATTCAGGATAAAGAAGGAATTCCGCCAGATCAG 101745 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATAA 31371 || | || || || || || |||||||||||||| | | | || | ||||| || Sbjct 101744 CAAAGGCTGATCTTTGCAGGAAAACAGTTGGAAGA-TGGACGCACCCTTTCTGATTACAA 101686 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 |||||||||||||| || || ||||| |||||| |||| | || |||| Sbjct 101685 TATTCAAAAAGAATCCACACTGCATCTTGTACTTCGACTTCGTGGAGGTA 101636 Score = 116 bits (128), Expect = 3e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| |||||||| || || |||||||| || | || ||||| || || Sbjct 101408 ATGCAGATCTTCGTCAAGACTCTAACTGGTAAAACGATTACATTAGAAGTTGAGCCTTCA 101349 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||||| || || | ||| || || ||||| | || || |||||| Sbjct 101348 GACACCATCGAAAATGTTAAGGCTAAAATTCAAGATAAAGAAGGAATTCCTCCTGACCAG 101289 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||| | || |||||||| ||||| | ||||| || || |||||||| Sbjct 101288 CAGCGTTTGATCTTCGCTGGAAAACAACTCGAAGATGGCCGAACCCTGTCAGATTATAAT 101229 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || |||||||| || ||||||||||| ||||| | ||| | || |||| Sbjct 101228 ATACAAAAAGAGTCCACTCTTCATCTTGTACTGCGGCTGCGAGGTGGTA 101180 Score = 105 bits (116), Expect = 6e-18 Identities = 155/214 (72%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| ||||| || || |||||||| |||||||| ||||| | || |||||||| || Sbjct 102548 ATGCAGATTTTTGTTAAAACTCTGACTGGCAAAACAATCACACTGGAAGTTGAACCTTCA 102489 Query 31253 GACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 || | | | |||| || || || ||| | || |||||||| | || || || || Sbjct 102488 GATACTATTGAAAATGTGAAGGCAAAGA-TCCAAGATAAGGAAGGTATCCCTCCTGATCA 102430 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTATA 31370 ||| | | || || ||||| || ||| | ||||| | | | ||| | ||||||| Sbjct 102429 ACAGAGATTGATTTTTGCTGGAAAGCAGCTTGAAGA-TGGACGTACTCTTTCTGATTATA 102371 Query 31371 ACATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 |||||||||||||||| ||||||||| | || || Sbjct 102370 ACATTCAAAAAGAATCTACTCTTCATTTAGTCCT 102337 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||||||||| || || ||| | || || ||||| || || | || |||||||| || Sbjct 100496 ATGCAAATTTTTGTTAAAACTTTAACTGGGAAAACAATTACATTGGAAGTTGAACCATCA 100437 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | | |||| || ||| | ||| ||| |||||||| | || || || ||| Sbjct 100436 GATACTATTGAAAACGTTAAAGCTAAAATTCAGGATAAGGAAGGAATTCCTCCAGATCAG 100377 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | | || || ||||||||||| || ||||| || | |||||||| Sbjct 100376 CAGAGATTGATTTTTGCTGGCAAACAATTAGAAGATGGGCGCACCCTCTCTGATTATAAT 100317 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 || ||||| ||||| || | ||||| |||||| | ||||| || || Sbjct 100316 ATCCAAAAGGAATCAACATTGCATCTTGTACTTCGTCTGAGAGGAGG 100270 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||||||||| || || ||| | || || ||||| || || | || ||||| || || Sbjct 102776 ATGCAAATTTTTGTTAAAACTTTAACTGGTAAAACAATTACATTGGAAGTTGAGCCTTCT 102717 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||||| ||||| | ||| ||||| ||||| | || || ||||| Sbjct 102716 GACACAATCGAAAATGTCAAGGCTAAAATTCAAGACAAAGAAGGAATCCCTCCAGACCAA 102657 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | ||||||| ||||| || ||| | ||||| ||| | ||||| ||| Sbjct 102656 CAGAGATTAATATTTGCTGGAAAGCAGCTTGAAGATGGCCGTACTCTTTCAGATTACAAC 102597 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||||| |||||||| ||| | ||| | |||||| | || || || || Sbjct 102596 ATTCAGAAAGAATCTACTTTACATTTAGTACTTCGTCTTAGAGGAGG 102550 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||||||||| || ||| | || ||||| || |||||| | || |||||||| || Sbjct 101180 ATGCAAATTTTCGTTAAAACTTTAACCGGCAAGACCATCACCCTGGAAGTTGAACCTTCA 101121 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | |||| || || | ||| ||| || ||||| | || || || || Sbjct 101120 GATACCATTGAAAATGTTAAGGCTAAAATTCAGGATAAAGAAGGAATTCCACCTGATCAA 101061 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | |||| || ||||| ||||| | ||||| | || | ||||||||| Sbjct 101060 CAGAGATTAATTTTTGCTGGTAAACAACTAGAAGATGGTCGTACCCTCTCCGATTATAAT 101001 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 || ||||||||||| || | ||||| || ||| | ||| | || || Sbjct 101000 ATCCAAAAAGAATCCACATTACATCTTGTTCTTCGTCTGCGAGGTGG 100954 Score = 89.7 bits (98), Expect = 5e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| || || |||||| | ||||| || ||||| || | || || ||||| || Sbjct 102092 ATGCAAATATTTGTGAAGACTTTAACAGGAAAGACGATTACATTGGAAGTGGAACCTTCT 102033 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | |||| || ||| | ||| || ||||| || | || || || ||| Sbjct 102032 GATACAATTGAAAATGTTAAAGCTAAAATTCAAGATAAGGAGGGTATTCCACCAGATCAG 101973 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || ||| | || || || || |||||||||||||| | ||| || ||||||||| Sbjct 101972 CAACGTTTGATCTTTGCAGGAAAACAGTTGGAAGATGGTCGTACTCTGTCTGATTATAAC 101913 Query 31373 ATTCAAAAAGAATCGAC 31389 ||||| || ||||| || Sbjct 101912 ATTCAGAAGGAATCAAC 101896 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||||||||| || || ||| | || || ||||| ||||| | || || ||||| || Sbjct 100268 ATGCAAATTTTTGTTAAAACTTTAACCGGAAAAACAATCACACTAGAAGTAGAACCTTCT 100209 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | | |||| || ||| | ||| ||| || ||||| | || || || ||| Sbjct 100208 GACACTATTGAAAATGTTAAAGCTAAAATTCAGGATAAAGAAGGAATTCCACCGGATCAG 100149 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||| | || || || ||||| ||||| | ||||| || || ||||| ||| Sbjct 100148 CAGAGACTTATTTTTGCTGGGAAACAACTTGAAGATGGCCGAACCTTGTCTGATTACAAC 100089 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 || || || ||||| || || ||| | || | | || |||||||| Sbjct 100088 ATCCAGAAGGAATCAACCCTGCATTTAGTTTTGCGTCTTAGGGGCGG 100042 Score = 86.0 bits (94), Expect = 6e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||||||||| || || ||||| || ||||| || ||||| | || |||||||| || Sbjct 100724 ATGCAAATTTTTGTTAAAACTCTTACCGGCAAGACAATCACGCTGGAAGTTGAACCTTCA 100665 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | |||| || || | ||| ||| || ||||| | || || || || Sbjct 100664 GATACCATTGAAAATGTGAAGGCTAAAATTCAGGATAAAGAAGGAATTCCACCAGATCAA 100605 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || ||| | || || ||||| ||||| | ||||| || | ||||| ||| Sbjct 100604 CAACGTTTGATTTTTGCTGGAAAACAACTCGAAGATGGCCGAACCCTTTCTGATTACAAC 100545 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||| || ||||| ||||||||| |||| || Sbjct 100544 ATTCAGAAGGAATCTACTCTTCATTTGGTCCT 100513 Score = 86.0 bits (94), Expect = 6e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| |||||||| || || ||||| || || | || ||||| || || Sbjct 103005 CATGCAGATCTTCGTCAAGACTCTAACCGGTAAAACAATTACATTAGAAGTTGAGCCTTC 102946 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | |||| || || | ||| || || ||||| | || || ||||| Sbjct 102945 AGACACAATTGAAAATGTTAAGGCCAAAATTCAAGATAAAGAAGGAATTCCACCAGACCA 102886 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 || | || || || ||||||||||| | ||||| || || ||||| || Sbjct 102885 ACAAAGACTGATTTTTGCTGGCAAACAACTAGAAGATGGCCGTACCTTGTCAGATTACAA 102826 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTA-GACTGAGGGGCGG 31419 || || || ||||| |||||||||||||| |||| | ||||| || || Sbjct 102825 TATCCAGAAGGAATCTACTCTTCATCTGGT-CTTACGTCTGAGAGGTGG 102778 >seq53 Length=1573976 Score = 95.1 bits (104), Expect = 1e-14 Identities = 97/127 (76%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 57510 GAACCACTTTTGCAAGAGAATCCCCGTAGATTTGTCATGTTTCCGATTGAATATCCAGAC 57569 ||||| || | |||| || || | || ||||| || || || |||||||||| || Sbjct 793818 GAACCCCTCCTTAAAGATAACCCAAGGAGGTTTGTTATTTTCCCAATTGAATATCATGAT 793877 Query 57570 ATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTG 57629 || ||||| ||||||||||| || |||||||| |||||||| | || ||||| || || Sbjct 793878 ATATGGAAGATGTACAAAAAAGCTGAAGCATCCTTTTGGACTGCTGAGGAAGTTGATCTC 793937 Query 57630 TCTAAGG 57636 ||||||| Sbjct 793938 TCTAAGG 793944 >seq2523 Length=169028 Score = 82.4 bits (90), Expect = 7e-11 Identities = 130/184 (71%), Gaps = 7/184 (4%) Strand=Plus/Minus Query 22493 TAAATGTTGGATGTGAACGGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAA 22552 ||||| || |||||| | ||||| || |||||||| || || | || ||||| || ||| Sbjct 123283 TAAATATTAGATGTGTATGGTTCAAATGATTCATTATTGCCTAAAATTTGAGCAGTAGAA 123224 Query 22553 GCGGTCGGCATCGGCGCCAACAGTAGCGAGTTTCTCAAGCCGTGCTTTGAAATTTTACTC 22612 || || ||||| || || | || | || || | || || || ||||||||||| Sbjct 123223 GCAGTTGGCATGGGTGCGATAAGCAAAGAATTCCGTAATCCATGTTTTGAAATTTTTTCT 123164 Query 22613 TTGA--GCATCGACCAGTCCCACAGATCGGACGGCGTCACATTGTCCCACATATCGTATT 22670 || | ||| | ||| ||||| ||||| | || || | ||| ||||||||| || | Sbjct 123163 TTCAATGCA--GCCCAATCCCAAAGATCAGTTGGAGTAATATT---CCACATATCATACT 123109 Query 22671 GCAA 22674 |||| Sbjct 123108 GCAA 123105 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445698598930560