Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Halyomorpha_20halys_20[refseq_20GCF_5F000696795.1_202014-06-03] 12,168 sequences; 1,150,108,890 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq53 138 1e-27 seq2523 134 1e-26 >seq53 Length=1573976 Score = 138 bits (152), Expect = 1e-27 Identities = 177/242 (73%), Gaps = 4/242 (2%) Strand=Plus/Minus Query 11635 AAAATCACAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCCGGG 11694 || || |||| |||| | || |||| | ||| || ||||| ||||| || | ||| || Sbjct 796340 AATATAACAA-GTAATACCTCATCTCGAGATATGAGCTCATTTGAAAAGGTAAGTCCTGG 796282 Query 11695 CATCAATCCTCGtttttttATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATATTCC 11754 ||| | |||| || || | |||||| ||||||||||| || ||||||||||| ||||| Sbjct 796281 CATGAGACCTCTCTTCTTAAGCCAAAAAATAGCAGCAAAGGAGCCAGAAAAGAAAATTCC 796222 Query 11755 CTCCACAGCTGCAAATGCTACTACTCTTTCTCCATA---TACCTTGTTGCTAGATATCCA 11811 || ||||| ||||| ||||||| ||| || ||| | || || || || ||||| Sbjct 796221 TTCAACAGCAGCAAACGCTACTATTCTCTCACCAAAAGTGGCCGTGGGACTGGAGATCCA 796162 Query 11812 TTTTCTGGCCCAATCAGCTTTCTTTTTTACGCATTCCATTGTTTCTATAGCGTTAAATAA 11871 ||||||||||| ||||| || || || ||||| ||||| || || || ||||| Sbjct 796161 AGAAAGTGCCCAATCAGCCTTCTTCTTAACACACTCCATGGTTTCGATGGCATTGAATAA 796102 Query 11872 AT 11873 || Sbjct 796101 AT 796100 >seq2523 Length=169028 Score = 134 bits (148), Expect = 1e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 37138 ACCTGAAAATCTCCAGATAATACTCTTCTTGTATATATATTGCTAGTATATGGTTCAATG 37197 |||||||| || ||||| | ||||||||||||||| ||||| || |||||||||| Sbjct 123316 ACCTGAAATTCACCAGAAAGTACTCTTCTTGTATAAATATTAGATGTGTATGGTTCAAAT 123257 Query 37198 GACTCATTATTACTTAATATTTGAGATGTAGATGCAGTAGGCATTGGTGCTATTAGAAGG 37257 || |||||||| | ||| ||||||| ||||| ||||| ||||| ||||| || || | Sbjct 123256 GATTCATTATTGCCTAAAATTTGAGCAGTAGAAGCAGTTGGCATGGGTGCGATAAGCAAA 123197 Query 37258 CTATTTCTCAATCCATGTGTATTAATTCTCTTTTTTAGTTCATTCCAATCCCATAAATCT 37317 ||| | ||||||||| | |||| | | ||| | | || ||||||||| | ||| Sbjct 123196 GAATTCCGTAATCCATGTTTTGAAATTTTTTCTTTCAATGCAGCCCAATCCCAAAGATCA 123137 Query 37318 GTTGGGTTCTTTAACCACATATCATATTG 37346 ||||| | | |||||||||||| || Sbjct 123136 GTTGGAGTAATATTCCACATATCATACTG 123108 Score = 129 bits (142), Expect = 5e-25 Identities = 210/299 (70%), Gaps = 9/299 (3%) Strand=Plus/Minus Query 37582 ACTGGATAATAATTGATATCTATTATTTTATTTAGATT---TTTAACTAGTATTTTCGTA 37638 || ||||||||||| || |||||||| ||||||||||| | |||| | || | || Sbjct 121644 ACAGGATAATAATTTATGTCTATTATCTTATTTAGATTCCATGTAACAACCTTTGT--TA 121587 Query 37639 ATTATTCTCAACTTGTCGAACATAAATACGTTATTA---TTAACAAATTTACTCAACGAA 37695 || ||||||| || || | | |||| | || | ||||||||| || | | Sbjct 121586 CAGCTT-TCAACTTTTCAAAATCACAGGTTTTATCAGCTTTCATAAATTTACTTAATGCA 121528 Query 37696 ATAGATCCTAGATTACATACAGCAACTTCATCTTCGTTACTAAATTGTATAATCTCTGTA 37755 || ||| ||| |||||| ||||||| ||||||| | || ||| ||||| || ||| Sbjct 121527 ATTGATGCTAAATTACAAACAGCAATTTCATCTGAAGAAGTATATTCAATAATTTCAGTA 121468 Query 37756 CAGAGATTACTCGATCTAATTGTTCCCAAATTGCTTTGATTGGATTTTTTATTACAAGAA 37815 || |||||||| | |||| ||||| | ||| | ||||| ||||| |||| |||||| Sbjct 121467 CAAAGATTACTACACTTAATAGTTCCTAGATTTTTCTGATTTGATTTCCTATTGCAAGAA 121408 Query 37816 TCTTTATATAGTATATACGGCGTTCCTTGTTCTATTTGAGCCTCGATAATAGATTTCCA 37874 |||||||| | || || || || ||| | ||||| || || |||| |||||| Sbjct 121407 TCTTTATACAACATGTAAGGTACACCAGTTTCAACTTGAGATTCAATGATAGCTTTCCA 121349 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468453537377920