Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Halyomorpha_20halys_20[refseq_20GCF_5F000696795.1_202014-06-03] 12,168 sequences; 1,150,108,890 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq1287 118 1e-21 >seq1287 Length=463317 Score = 118 bits (130), Expect = 1e-21 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || |||||||| | |||||| || | || || || || |||||||||||||| | Sbjct 101866 CCACCACGTAAACGTAGAACTAAATGTAAGGTTGATTCCTTCTGAATGTTATAATCAGAC 101925 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || | ||||| | |||||| || ||| |||||| |||||||||||| || || Sbjct 101926 AGAGTACGACCATCTTCCAACTGTTTTCCTGCAAAGATCAAACGTTGCTGATCTGGTGGA 101985 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTCCAC 139716 || || || || || ||| |||| | |||| | | ||| | ||| || | || ||||| Sbjct 101986 ATACCCTCCTTATC-TTGAATTTTAGCTTTAACATTTTCAATTGTATCAGAAGGTTCCAC 102044 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 || | || | |||||| || || || || || || |||||||||||| Sbjct 102045 TTCCAATGTAATCGTCTTTCCTGTTAAAGTCTTCACAAATATTTGCATA 102093 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || ||||| | |||| || | |||| || |||||||||||||| |||||||| Sbjct 102094 CCACCTCGCAGCCGCAGTACAAGATGAAGAGTGGACTCTTTTTGAATATTATAATCTGAA 102153 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || | | ||||| || ||||| |||||| | || | ||| ||||| || || ||| Sbjct 102154 AGGGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAAATTAAACGCTGCTGGTCAGGGGGT 102213 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACT-GTGTCGGTGGGCTCCAC 139716 || |||||||| || ||| |||| | ||| | || || | ||||| | || || || Sbjct 102214 ATTCCTTCTTTATCT-TGAATTTTCGCTTTGACATTTTCAATAGTGTCAGATGGTTCAAC 102272 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || | || | ||||||||||| | ||||| || ||||||||||| Sbjct 102273 TTCCAGCGTGATTGTCTTGCCGGTAAGAGTTTTAACAAATATTTGCAT 102320 Score = 100 bits (110), Expect = 3e-16 Identities = 163/232 (70%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| ||||||| || || |||| ||||| || || |||||||| ||||| Sbjct 100498 CCACCTCTCAAACGCAGGACCAAATGAAGAGTAGATTCCTTCTGAATGTTGTAATCAGAA 100557 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || | |||||||| ||||| |||||| | |||| |||||| ||||| || || Sbjct 100558 AGGGTTCGGCCATCTTCGAGTTGTTTTCCAGCAAAAATCAAACGTTGTTGATCTGGTGGA 100617 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTG-TGTCGGTGGGCTCCAC 139716 || |||||||| || ||| |||| | || | || || || | || | || || || Sbjct 100618 ATTCCTTCTTTATCC-TGAATTTTAGCCTTCACATTTTCAATGGTATCTGAAGGTTCAAC 100676 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATAGCT 139768 || | || | ||||||||||| | ||||| || || ||||||||| || Sbjct 100677 TTCCAGCGTGATTGTCTTGCCGGTAAGAGTTTTAACAAAAATTTGCATACCT 100728 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || ||||| | |||| || | |||| || ||||||||||| || |||||||| | Sbjct 101182 CCACCTCGCAGCCGCAGTACAAGATGAAGAGTGGACTCTTTTTGTATATTATAATCTGAC 101241 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || | |||||||| ||||| ||||| |||||| ||| ||||| || ||||| Sbjct 101242 AGGGTTCGGCCATCTTCGAGTTGTTTTCCAGCGAAGATCAAACGCTGCTGGTCAGGAGGA 101301 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTCCAC 139716 || |||||||| || ||| |||| | ||| | | ||| | ||||| | ||||| || Sbjct 101302 ATTCCTTCTTTATC-TTGAATTTTAGCCTTAACATTTTCGATGGTGTCTGAAGGCTCAAC 101360 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || | || | ||| || || || | || || ||||| || ||||| Sbjct 101361 TTCTAATGTAATCGTTTTACCAGTTAGAGTCTTGACGAAGATCTGCAT 101408 Score = 98.7 bits (108), Expect = 1e-15 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || |||||||||| ||||| |||| ||||| |||||||||||||||||||| Sbjct 102322 CCACCACGTAAACGCAGGACTAAATGAAGAGTAGATTCTTTTTGAATGTTATAATCAGAA 102381 Query 139598 ATTGTGC-TCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | || | || | ||||| ||||| || |||||| | |||| | || ||||| ||||| Sbjct 102382 AGAGTACGTCCA-TCTTCAAGCTGCTTTCCAGCAAAAATCAATCTCTGTTGATCAGGAGG 102440 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 || ||||| || || ||| ||| || | | ||| | || || | || || || Sbjct 102441 GATACCTTCCTTATCTTGGATCTTTGCCTTCACATTTTCAATAGTATCTGAAGGTTCAAC 102500 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || | || | || ||||| |||| ||||| || || || ||||| Sbjct 102501 TTCCAGTGTGATTGTTTTGCCAGTCAGAGTTTTAACAAAAATCTGCAT 102548 Score = 96.9 bits (106), Expect = 3e-15 Identities = 161/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 ||| ||||| | ||| | ||| | || | || || |||||||| || ||||||||| Sbjct 100953 GCCACCTCGCAGACGAAGAACAAGATGTAATGTGGATTCTTTTTGGATATTATAATCGGA 101012 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | || | ||||| || |||||||||||| | || | | || ||||| || || Sbjct 101013 GAGGGTACGACCATCTTCTAGTTGTTTACCAGCAAAAATTAATCTCTGTTGATCAGGTGG 101072 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTCCA 139715 || |||||||| || ||| |||| | ||| | | ||| | || || | || || | Sbjct 101073 AATTCCTTCTTTATC-CTGAATTTTAGCCTTAACATTTTCAATGGTATCTGAAGGTTCAA 101131 Query 139716 CCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 | || | ||| | ||||||||||| || ||||| ||||| ||||||||| Sbjct 101132 CTTCCAGGGTGATGGTCTTGCCGGTTAAAGTTTTAACGAAAATTTGCATA 101181 Score = 96.9 bits (106), Expect = 3e-15 Identities = 162/232 (70%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || |||| |||||| | ||||| || | || || ||||| || || |||||||| Sbjct 101410 CCTCCTCTTAAACGAAGTACTAAATGTAAGGTTGATTCTTTCTGGATATTATAATCAGAG 101469 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| ||||| || ||||||||||| | ||||| | |||||||| || || Sbjct 101470 AGGGTGCGGCCATCTTCTAGTTGTTTACCAGCGAAAATCAGTCTCTGCTGATCAGGTGGA 101529 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTCCAC 139716 || |||||||| || ||| |||| | |||| | | ||| | || || | || || || Sbjct 101530 ATACCTTCTTTATC-CTGAATTTTAGCTTTAACATTTTCTATGGTATCAGATGGTTCAAC 101588 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATAGCT 139768 || | ||| | || ||||| || || ||||| || || || |||||| || Sbjct 101589 TTCCAAGGTTATAGTTTTGCCAGTTAAAGTTTTCACAAAGATCTGCATACCT 101640 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 ||||| | | |||||||||||| || | || || || || || ||||| ||||| | Sbjct 100042 CCGCCCCTAAGACGCAAAACTAAATGCAGGGTTGATTCCTTCTGGATGTTGTAATCAGAC 100101 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | || | ||||| || ||||| |||||| | || || | |||||||| || || Sbjct 100102 AAGGTTCGGCCATCTTCAAGTTGTTTCCCAGCAAAAATAAGTCTCTGCTGATCCGGTGGA 100161 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTCCAC 139716 || |||||||| || ||| |||| | |||| | | ||| | ||||| | || || || Sbjct 100162 ATTCCTTCTTTATC-CTGAATTTTAGCTTTAACATTTTCAATAGTGTCAGAAGGTTCTAC 100220 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || | || | || || ||||| || ||||| || || |||||||| Sbjct 100221 TTCTAGTGTGATTGTTTTTCCGGTTAAAGTTTTAACAAAAATTTGCAT 100268 Score = 87.8 bits (96), Expect = 2e-12 Identities = 142/199 (71%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGC-TCGAGTCTTCGAGCTGTTTACC 139626 || || ||||||||||| || ||||| | |||| || | ||||| | |||||| || Sbjct 101668 GTGGATTCTTTTTGAATATTGTAATCAGAAAGGGTGCGTCCA-TCTTCCAACTGTTTTCC 101726 Query 139627 AGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTT 139686 ||| ||||||| | ||||||||| || || || |||||||| || ||| |||| | || Sbjct 101727 TGCAAAGATCAGCCTTTGCTGATCTGGCGGAATTCCTTCTTTATC-CTGAATTTTAGCTT 101785 Query 139687 TAGC-TGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACG 139745 || | | ||| | ||||| | || ||||| || | || | || || || || | | Sbjct 101786 TAACATTTTCAATAGTGTCAGAAGGTTCCACTTCTAATGTAATGGTTTTTCCTGTTAGTG 101845 Query 139746 TTTTTACGAATATTTGCAT 139764 | || || || |||||||| Sbjct 101846 TCTTGACAAAAATTTGCAT 101864 Score = 86.0 bits (94), Expect = 6e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 ||| |||| | ||| | || || || | ||||| ||||| ||||| |||||||| Sbjct 103233 GCCTCCTCTCAGACGAAGCACCAAATGTAATGTAGATTCTTTCTGAATATTATAATCTGA 103292 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | ||||| ||||| ||||| || |||||| | || | | || || || || || Sbjct 103293 AAGTGTGCGGCCATCTTCAAGCTGCTTTCCAGCAAAAATTAATCTCTGTTGGTCTGGGGG 103352 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTCCA 139715 || ||||||||||| ||| |||| | ||| | | ||| | |||||| | ||||| | Sbjct 103353 AATTCCTTCTTTGTC-TTGAATTTTGGCCTTAACATTTTCTATTGTGTCAGAAGGCTCAA 103411 Query 139716 CCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 | || | || | || |||||||| | || || ||||| || ||||| Sbjct 103412 CTTCTAATGTAATTGTTTTGCCGGTAAGTGTCTTGACGAAGATCTGCAT 103460 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 495988548665600