Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Halyomorpha_20halys_20[refseq_20GCF_5F000696795.1_202014-06-03] 12,168 sequences; 1,150,108,890 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq53 136 6e-27 seq2523 129 8e-25 >seq53 Length=1573976 Score = 136 bits (150), Expect = 6e-27 Identities = 167/226 (74%), Gaps = 3/226 (1%) Strand=Plus/Minus Query 49982 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 50041 |||| |||| | || || || || ||||| || ||||| ||||| || || | ||| | Sbjct 796324 CCTCATCTCGAGATATGAGCTCATTTGAAAAGGTAAGTCCTGGCATGAGACCTCTCTTCT 796265 Query 50042 TAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGG 50101 |||||||||| || | ||||| || ||||||||||| |||||||| || || ||||| | Sbjct 796264 TAAGCCAAAAAATAGCAGCAAAGGAGCCAGAAAAGAAAATTCCTTCAACAGCAGCAAACG 796205 Query 50102 CAACAAGTCTCTCTCCATAACTGGCGCTGTCA-TG--TATCCACTTTTGAGCCCAATCGG 50158 | || | |||||| ||| || |||| || | || ||||| | |||||||| | Sbjct 796204 CTACTATTCTCTCACCAAAAGTGGCCGTGGGACTGGAGATCCAAGAAAGTGCCCAATCAG 796145 Query 50159 CCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATA 50204 ||||||| || ||||| ||| ||||| |||||||| || | ||| Sbjct 796144 CCTTCTTCTTAACACACTCCATGGTTTCGATGGCATTGAATAAATA 796099 Score = 102 bits (112), Expect = 1e-16 Identities = 98/126 (78%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 50446 TTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTC 50505 ||||| | ||| ||||| || | |||||||| ||||| || || ||||| ||||| ||| Sbjct 793942 TTAGAGAGATCAACTTCCTCAGCAGTCCAAAAGGATGCTTCAGCTTTTTTGTACATCTTC 793883 Query 50506 CAGATGTCATGATATTGGATTGGGAAAATAACAAATCTATTTGGATTTGGTGCAAGGATC 50565 || || |||||||||| ||||||||||||||||| || |||| || | ||||| Sbjct 793882 CATATATCATGATATTCAATTGGGAAAATAACAAACCTCCTTGGGTTATCTTTAAGGAGG 793823 Query 50566 GGTTCC 50571 |||||| Sbjct 793822 GGTTCC 793817 Score = 98.7 bits (108), Expect = 1e-15 Identities = 149/211 (71%), Gaps = 1/211 (0%) Strand=Plus/Minus Query 49775 CCAA-TTCAGAAATCAATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAA 49833 |||| |||| || ||||||||| || |||||||| || ||| |||||||| |||||| Sbjct 796813 CCAAGTTCACCAAGCAATCTATCAGCAACAAATTCGATGTATTGTTTCATCAGATCACAA 796754 Query 49834 TTCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACC 49893 |||||||| || | |||||| || || |||| |||||||| || || ||| ||| Sbjct 796753 TTCATTCCAATCATCGCAACTGGCAGCGCTTCAGTCAGAAATTCCTGCTCTATGACTACA 796694 Query 49894 GCATCTGTTATAATAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAAC 49953 |||| | ||||| |||| | || || ||| || | | || || ||| Sbjct 796693 GCATTACTGATAATTTCGGTAACCCTCTCAACAGATGGTTTCTGAACAAGGTGCTTGAAC 796634 Query 49954 ATCAAACATGCGAAATCGCAGTGCAGACCCT 49984 |||| ||| ||||| || || || ||||||| Sbjct 796633 ATCAGACAAGCGAAGTCACAATGAAGACCCT 796603 >seq2523 Length=169028 Score = 129 bits (142), Expect = 8e-25 Identities = 157/212 (74%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 79059 TACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCAC 79118 ||| |||||||| ||||| | |||||| | || ||||||||| || |||||||| | Sbjct 123317 TACCTGAAATTCACCAGAAAGTACTCTTCTTGTATAAATATTAGATGTGTATGGTTCAAA 123258 Query 79119 CGATTCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAA 79178 ||||||||||| || |||||||||||||| || || |||||||| ||||| | | || Sbjct 123257 TGATTCATTATTGCCTAAAATTTGAGCAGTAGAAGCAGTTGGCATGGGTGCGATAAGCAA 123198 Query 79179 ACTATTTCTAAGACCGTATGATCTG--ATTTTATCTTTTAGAGATTCCCAATCCCAAAGA 79236 | ||| | | || ||| | || ||||| ||||| | | |||||||||||||| Sbjct 123197 AGAATTCCGTAATCC--ATGTTTTGAAATTTTTTCTTTCAATGCAGCCCAATCCCAAAGA 123140 Query 79237 TCAGACGGGACAACATTCCAAAGATCATATTG 79268 |||| || || |||||| | |||||| || Sbjct 123139 TCAGTTGGAGTAATATTCCACATATCATACTG 123108 Score = 114 bits (126), Expect = 2e-20 Identities = 208/299 (70%), Gaps = 9/299 (3%) Strand=Plus/Minus Query 79506 AGGATAATAATTAATATCTATAATTTTATTGAGATTCC---TGACTATTACTTTGACCAC 79562 |||||||||||| || ||||| || ||||| ||||||| | || | ||||| || Sbjct 121642 AGGATAATAATTTATGTCTATTATCTTATTTAGATTCCATGTAACAAC--CTTTGTT-AC 121586 Query 79563 ATCCTTTAGTTTGAGAAAATCAAATCGTCCATCTA-TTACAAACATGTTC--AACGCGAC 79619 | | || | || ||||||| | | ||| || || | || | | || || | Sbjct 121585 AGCTTTCAACTTTTCAAAATCACAGGTTTTATCAGCTTTCATAAATTTACTTAATGCAAT 121526 Query 79620 AGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATTTCAGTGCA 79679 ||||| | ||||||||| || | |||| | | | ||||| || |||||||| || Sbjct 121525 TGATGCTAAATTACAAACAGCAATTTCATCTGAAGAAGTATATTCAATAATTTCAGTACA 121466 Query 79680 GAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATC 79739 || |||||||||||||| ||||||| ||||| ||||| || | || || | ||| Sbjct 121465 AAGATTACTACACTTAATAGTTCCTAGATTTTTCTGATTTGATTTCCTATTGCAAGAATC 121406 Query 79740 CTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGA 79798 ||||| | ||| | || ||||||||||| |||||||| || || |||||||||| Sbjct 121405 TTTATACAACATGTAAGGTACACCAGTTTCAACTTGAGATTCAATGATAGCTTTCCAGA 121347 Score = 98.7 bits (108), Expect = 1e-15 Identities = 148/210 (70%), Gaps = 8/210 (4%) Strand=Plus/Minus Query 79291 GATCCTGTGTATGTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAAT 79350 ||||| |||| || ||||| ||||| | | ||| || ||||||||||| ||||| | | Sbjct 122991 GATCCACTGTAAGTCTCATATGGTCCATATTCTTCAGCCAATTCACAACTAGCCTCAAGT 122932 Query 79351 GCTCCGTAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCA 79410 || || ||||| | ||||| ||||||| || || ||| | || || || ||| Sbjct 122931 GCACCATAATACAAAGTTTCAAAAATCTGTTTGTTCAGAAGTCCAGCAGCTTCACTTTCA 122872 Query 79411 AATGG----ATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGAT 79466 ||||| | |||| | ||||||| || || | |||||||| ||||| || || Sbjct 122871 AATGGCAACCTCATTTGAATGAATAAA----TCAGCAAGCCCTTGAACTCCAATGCCAAT 122816 Query 79467 AGGTCTATGTCTCTTATTAGAAATTTCAGC 79496 ||| | ||||||| | ||||| ||| ||| Sbjct 122815 AGGACGATGTCTCATGTTAGATCTTTGAGC 122786 Score = 87.8 bits (96), Expect = 3e-12 Identities = 104/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 80334 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATT 80393 |||| | ||| | ||||| || || || || || ||||| || |||||| || | ||| Sbjct 113586 AGTTGCAGCACTGAATAATGTGGGTGAGGCATGTGTAAAATATCCTTCAGAGAGCAAATT 113527 Query 80394 GTACGTCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAA 80453 ||| || | |||| | | ||||||||| ||| ||||| || || || | ||| || Sbjct 113526 GTATGTTTTAATAACAGCATCTATATCCTCACCATGGATTCCAACAGCAACCCTCATCAA 113467 Query 80454 CATGTGCTGAGGTCTTTCAAC 80474 |||||| |||||||||||||| Sbjct 113466 CATGTGTTGAGGTCTTTCAAC 113446 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718159551315520