Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Halyomorpha_20halys_20[refseq_20GCF_5F000696795.1_202014-06-03]
12,168 sequences; 1,150,108,890 total letters
Query= NC_004002.1
Length=149955
Score E
Sequences producing significant alignments: (Bits) Value
seq53 134 1e-26
>seq53
Length=1573976
Score = 134 bits (148), Expect = 1e-26
Identities = 167/229 (73%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 13894 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 13953
||||||||| | || || || |||||||| || | ||||||||| | |||| || |
Sbjct 796324 CCTCATCTCGAGATATGAGCTCATTTGAAAAGGTAAGTCCTGGCATGAGACCTCTCTTCT 796265
Query 13954 ttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 14013
| | |||||| || |||||||| || || |||||||| ||||| ||||| ||||||||||
Sbjct 796264 TAAGCCAAAAAATAGCAGCAAAGGAGCCAGAAAAGAAAATTCCTTCAACAGCAGCAAACG 796205
Query 14014 CTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTCAG 14073
||| || || || ||||| | || | | || ||||| ||||| ||||
Sbjct 796204 CTACTATTCTCTCACCAAAAGTGGCCGTGGGACTGGAGATCCAAGAAAGTGCCCAATCAG 796145
Query 14074 AtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATATTC 14122
|| || |||| | | ||||| ||||| || ||||| |||||||||||
Sbjct 796144 CCTTCTTCTTAACACACTCCATGGTTTCGATGGCATTGAATAAATATTC 796096
Score = 82.4 bits (90), Expect = 7e-11
Identities = 88/115 (77%), Gaps = 1/115 (1%)
Strand=Plus/Minus
Query 14111 AAATAA-ATATTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACA 14169
|||||| | ||| | | ||||| | | | ||| || |||||||| || | ||| ||||
Sbjct 794369 AAATAAGAAATTACCTTTCTTTTGGATCTCTAATATAAGTATCAATGAGCAGGCTGTACA 794310
Query 14170 TTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTC 14224
| ||||| || | |||||||||||| || |||||||| || || || ||||||||
Sbjct 794309 TCTCAGAATGCACGTTTTCCATAGCAATTTGAAAACCGTAGAAACACCTAGCTTC 794255
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 479655033371200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |