Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Halyomorpha_20halys_20[refseq_20GCF_5F000696795.1_202014-06-03] 12,168 sequences; 1,150,108,890 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq53 134 1e-26 >seq53 Length=1573976 Score = 134 bits (148), Expect = 1e-26 Identities = 167/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 13682 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 13741 ||||||||| | || || || |||||||| || | ||||||||| | |||| || | Sbjct 796324 CCTCATCTCGAGATATGAGCTCATTTGAAAAGGTAAGTCCTGGCATGAGACCTCTCTTCT 796265 Query 13742 ttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 13801 | | |||||| || ||||| || || || |||||||| ||||| ||||| |||||||||| Sbjct 796264 TAAGCCAAAAAATAGCAGCAAAGGAGCCAGAAAAGAAAATTCCTTCAACAGCAGCAAACG 796205 Query 13802 CTATTAGTCGTTCTCCAAACGATGCTTTTTTGTTTGATATCCATTTTCTAGCCCATTCAG 13861 ||| || || || ||||| | || | | || ||||| ||||| |||| Sbjct 796204 CTACTATTCTCTCACCAAAAGTGGCCGTGGGACTGGAGATCCAAGAAAGTGCCCAATCAG 796145 Query 13862 AtttttttttAATAAAATCCATTGTTTCGATTGCATTGAATAAATGTTC 13910 || || |||| | | ||||| |||||||| ||||||||||||| ||| Sbjct 796144 CCTTCTTCTTAACACACTCCATGGTTTCGATGGCATTGAATAAATATTC 796096 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478516006643520