Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Halyomorpha_20halys_20[refseq_20GCF_5F000696795.1_202014-06-03] 12,168 sequences; 1,150,108,890 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq1287 104 2e-17 >seq1287 Length=463317 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || || | ||| | ||| |||| ||| | ||| ||||| || | ||||||||| ||| Sbjct 102778 CCACCTCTCAGACGTAAGACCAGATGAAGAGTAGATTCCTTCTGGATATTGTAATCTGAC 102837 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 || ||||| | || || | ||||||||| |||||||||| || ||||| || | || Sbjct 102838 AAGGTACGGCCATCTTCTAGTTGTTTGCCAGCAAAAATCAGTCTTTGTTGGTCTGGTGGA 102897 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062 | |||||||| || || | || || | ||| |||||| || ||| || Sbjct 102898 ATTCCTTCTTTATCTTGAATTTTGGCCTTAACATTTTCAATTGTGTCTGAAGGCTCAACT 102957 Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 |||| || || ||||| ||||||||||| || || || || ||||| Sbjct 102958 TCTAATGTAATTGTTTTACCGGTTAGAGTCTTGACGAAGATCTGCAT 103004 Score = 102 bits (112), Expect = 6e-17 Identities = 140/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 42919 TCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAA 42978 ||||| || | |||||||| ||||| || || | || || | |||||| || |||||| Sbjct 100078 TCCTTCTGGATGTTGTAATCAGACAAGGTTCGGCCATCTTCAAGTTGTTTCCCAGCAAAA 100137 Query 42979 ATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTGA-TCAACTCTTTGACTCT 43037 || | || ||| ||||| | || | |||||||| || |||| | |||| || | Sbjct 100138 ATAAGTCTCTGCTGATCCGGTGGAATTCCTTCTTTATC-CTGAATTTTAGCTTTAACATT 100196 Query 43038 GCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCAC 43097 ||| ||||| || || || |||| || || ||||||||||||| |||||| || Sbjct 100197 TTCAATAGTGTCAGAAGGTTCTACTTCTAGTGTGATTGTTTTTCCGGTTAAAGTTTTAAC 100256 Query 43098 AAAAATTTGCATT 43110 ||||||||||||| Sbjct 100257 AAAAATTTGCATT 100269 Score = 100 bits (110), Expect = 2e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 |||||||| |||| | || | ||| | ||| || ||||| | ||||||||| || Sbjct 101638 CCTCCACGAAGTCGAAGTACAAGATGCAGTGTGGATTCTTTTTGAATATTGTAATCAGAA 101697 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 | || ||| | || ||||| ||||| || ||||| |||| | || ||||| | ||| Sbjct 101698 AGGGTGCGTCCATCTTCCAACTGTTTTCCTGCAAAGATCAGCCTTTGCTGATCTGGCGGA 101757 Query 43003 ACACCTTCTTTTTCGCTGA-TCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGAC 43061 | |||||||| || |||| | |||| || | ||| ||||| || || || Sbjct 101758 ATTCCTTCTTTATC-CTGAATTTTAGCTTTAACATTTTCAATAGTGTCAGAAGGTTCCAC 101816 Query 43062 GTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATT 43110 |||| || || |||||||| ||||| || || ||||||||||||||| Sbjct 101817 TTCTAATGTAATGGTTTTTCCTGTTAGTGTCTTGACAAAAATTTGCATT 101865 Score = 91.5 bits (100), Expect = 1e-13 Identities = 137/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 42919 TCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAA 42978 |||||||| | ||||||||| || | || || | || || | || || || |||||| Sbjct 100762 TCCTTTTGAATATTGTAATCTGAAAGGGTTCGGCCATCTTCAAGCTGCTTTCCAGCAAAA 100821 Query 42979 ATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTG-ATCAACTCTTTGACTCT 43037 ||||||| ||||||||| | || | |||||||| || ||| || |||| || | Sbjct 100822 ATCAATCTCTGTTGATCCGGTGGAATTCCTTCTTTATC-CTGAATTTTGGCTTTAACGTT 100880 Query 43038 GCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCAC 43097 ||| || || | ||| || || | || ||||| ||||| || |||||||| || Sbjct 100881 CTCAATAGTATCAGATGGCTCAACTTCCAAAGTGATAGTCTTTCCAGTGAGAGTTTTAAC 100940 Query 43098 AAAAATTTGCAT 43109 |||||||||||| Sbjct 100941 AAAAATTTGCAT 100952 Score = 89.7 bits (98), Expect = 4e-13 Identities = 137/193 (71%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 42919 TCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAA 42978 |||||||| | ||| ||||| || | || || | || || ||||||||||| |||||| Sbjct 100306 TCCTTTTGGATATTATAATCAGAGAGGGTGCGCCCATCTTCTAATTGTTTGCCAGCAAAA 100365 Query 42979 ATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTG-ATCAACTCTTTGACTCT 43037 ||||||| ||| ||||| | || | ||||| || || ||| || |||| || | Sbjct 100366 ATCAATCTCTGCTGATCTGGAGGAATTCCTTCCTTATC-CTGAATTTTAGCTTTAACGTT 100424 Query 43038 GCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCAC 43097 ||| || || | || || || | || || ||||| || |||| |||||| || Sbjct 100425 TTCAATAGTATCTGATGGTTCAACTTCCAATGTAATTGTTTTCCCAGTTAAAGTTTTAAC 100484 Query 43098 AAAAATTTGCATT 43110 ||||||||||||| Sbjct 100485 AAAAATTTGCATT 100497 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 42901 ACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCC 42960 |||||||| | ||| ||||| || | |||||||| || | || || | || || Sbjct 100516 ACCAAATGAAGAGTAGATTCCTTCTGAATGTTGTAATCAGAAAGGGTTCGGCCATCTTCG 100575 Query 42961 AATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTG 43020 | |||||| || ||||||||||| || |||||||| | || | |||||||| || ||| Sbjct 100576 AGTTGTTTTCCAGCAAAAATCAAACGTTGTTGATCTGGTGGAATTCCTTCTTTATC-CTG 100634 Query 43021 -ATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTT 43079 || | || || | ||| || || || || || || | ||| || || || Sbjct 100635 AATTTTAGCCTTCACATTTTCAATGGTATCTGAAGGTTCAACTTCCAGCGTGATTGTCTT 100694 Query 43080 TCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 ||||| |||||||| |||||||||||||| Sbjct 100695 GCCGGTAAGAGTTTTAACAAAAATTTGCAT 100724 Score = 82.4 bits (90), Expect = 6e-11 Identities = 135/192 (70%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 42919 TCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAA 42978 || ||||| | ||| |||||||| | ||||| | || || | |||||| || |||||| Sbjct 100990 TCTTTTTGGATATTATAATCGGAGAGGGTACGACCATCTTCTAGTTGTTTACCAGCAAAA 101049 Query 42979 ATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTGA-TCAACTCTTTGACTCT 43037 || |||| ||||||||| | || | |||||||| || |||| | | || || | Sbjct 101050 ATTAATCTCTGTTGATCAGGTGGAATTCCTTCTTTATC-CTGAATTTTAGCCTTAACATT 101108 Query 43038 GCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCAC 43097 ||| || || || || || || | || || || || ||||||| |||||| || Sbjct 101109 TTCAATGGTATCTGAAGGTTCAACTTCCAGGGTGATGGTCTTGCCGGTTAAAGTTTTAAC 101168 Query 43098 AAAAATTTGCAT 43109 ||||||||||| Sbjct 101169 GAAAATTTGCAT 101180 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 42901 ACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCC 42960 || ||||| | ||| || ||||| | || ||||| || | |||||| | || || Sbjct 102340 ACTAAATGAAGAGTAGATTCTTTTTGAATGTTATAATCAGAAAGAGTACGTCCATCTTCA 102399 Query 42961 AATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTG 43020 | || || || ||||||||||||| ||||||||| | || | |||||| || || | Sbjct 102400 AGCTGCTTTCCAGCAAAAATCAATCTCTGTTGATCAGGAGGGATACCTTCCTTATCTTGG 102459 Query 43021 ATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTT 43080 ||| | || || | ||| || || || || || || | || || ||||| Sbjct 102460 ATCTTTGCCTTCACATTTTCAATAGTATCTGAAGGTTCAACTTCCAGTGTGATTGTTTTG 102519 Query 43081 CCGGTTAGAGTTTTCACAAAAATTTGCATT 43110 || || |||||||| |||||||| |||||| Sbjct 102520 CCAGTCAGAGTTTTAACAAAAATCTGCATT 102549 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381313043841744