Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Halyomorpha_20halys_20[refseq_20GCF_5F000696795.1_202014-06-03] 12,168 sequences; 1,150,108,890 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq1287 107 2e-18 seq1631 105 6e-18 >seq1287 Length=463317 Score = 107 bits (118), Expect = 2e-18 Identities = 152/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 19996 CAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATC 20055 ||| || ||||| || || ||||| || || ||||||||||| || ||| ||| Sbjct 100056 CAAAACTAAATGCAGGGTTGATTCCTTCTGGATGTTGTAATCAGACAAGGTTCGGCCATC 100115 Query 20056 TTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTC 20115 ||| | |||||| || ||| ||||||| ||||| ||||| || | |||||||| || Sbjct 100116 TTCAAGTTGTTTCCCAGCAAAAATAAGTCTCTGCTGATCCGGTGGAATTCCTTCTTTATC 100175 Query 20116 GGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGT 20175 |||||| ||| || | ||| || || |||||| ||| | || || || Sbjct 100176 CTGAATTTTAGCTTTAACATTTTCAATAGTGTCAGAAGGTTCTACTTCTAGTGTGATTGT 100235 Query 20176 TTTGCCGGTCAACGTTTTGACAAAAATTTGCATT 20209 ||| ||||| || ||||| ||||||||||||||| Sbjct 100236 TTTTCCGGTTAAAGTTTTAACAAAAATTTGCATT 100269 Score = 102 bits (112), Expect = 7e-17 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 20005 ATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTCCAATTG 20064 ||||| ||| ||||||||||| || || |||||| | || | |||||| | ||| Sbjct 100977 ATGTAATGTGGATTCTTTTTGGATATTATAATCGGAGAGGGTACGACCATCTTCTAGTTG 101036 Query 20065 TTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGCAATTTT 20124 ||| || ||| |||| | ||||||||||| || | |||||||| || |||||| Sbjct 101037 TTTACCAGCAAAAATTAATCTCTGTTGATCAGGTGGAATTCCTTCTTTATCCTGAATTTT 101096 Query 20125 TTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTTGCCGGT 20184 || || | ||| | ||| |||||| ||||| ||| ||||| |||||||| Sbjct 101097 AGCCTTAACATTTTCAATGGTATCTGAAGGTTCAACTTCCAGGGTGATGGTCTTGCCGGT 101156 Query 20185 CAACGTTTTGACAAAAATTTGCAT 20208 || ||||| || ||||||||||| Sbjct 101157 TAAAGTTTTAACGAAAATTTGCAT 101180 Score = 100 bits (110), Expect = 2e-16 Identities = 145/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 20005 ATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTCCAATTG 20064 ||| ||||| ||||||||||| || |||||||| | || ||||||||| || Sbjct 101661 ATGCAGTGTGGATTCTTTTTGAATATTGTAATCAGAAAGGGTGCGTCCATCTTCCAACTG 101720 Query 20065 TTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGCAATTTT 20124 ||| || ||| | || ||||| || ||||| || | |||||||| || |||||| Sbjct 101721 TTTTCCTGCAAAGATCAGCCTTTGCTGATCTGGCGGAATTCCTTCTTTATCCTGAATTTT 101780 Query 20125 TTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTTGCCGGT 20184 ||| || | ||| || || ||||||| ||| | ||||||||||| || || Sbjct 101781 AGCTTTAACATTTTCAATAGTGTCAGAAGGTTCCACTTCTAATGTAATGGTTTTTCCTGT 101840 Query 20185 CAACGTTTTGACAAAAATTTGCATT 20209 | || |||||||||||||||||| Sbjct 101841 TAGTGTCTTGACAAAAATTTGCATT 101865 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 19980 TTCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGC 20039 |||| || ||||| | || || ||||| || |||||||||||||| ||||| ||||| Sbjct 102320 TTCCACCACGTAAACGCAGGACTAAATGAAGAGTAGATTCTTTTTGAATGTTATAATCAG 102379 Query 20040 CCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGG 20099 | ||| |||||| | || || || ||| |||| | ||||||||||| | Sbjct 102380 AAAGAGTACGTCCATCTTCAAGCTGCTTTCCAGCAAAAATCAATCTCTGTTGATCAGGAG 102439 Query 20100 GCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCG 20159 | | ||||| || || || ||| ||||| | ||| || ||| |||||| Sbjct 102440 GGATACCTTCCTTATCTTGGATCTTTGCCTTCACATTTTCAATAGTATCTGAAGGTTCAA 102499 Query 20160 TTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATT 20209 ||||| || || |||||||| |||| ||||| |||||||| |||||| Sbjct 102500 CTTCCAGTGTGATTGTTTTGCCAGTCAGAGTTTTAACAAAAATCTGCATT 102549 Score = 98.7 bits (108), Expect = 8e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 19980 TTCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGC 20039 |||| |||| || | || |||||||| || |||||||| || || ||||||||||| Sbjct 100496 TTCCACCTCTCAAACGCAGGACCAAATGAAGAGTAGATTCCTTCTGAATGTTGTAATCAG 100555 Query 20040 CCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGG 20099 | ||| |||||| | |||||| || ||| |||| | | |||||||| | Sbjct 100556 AAAGGGTTCGGCCATCTTCGAGTTGTTTTCCAGCAAAAATCAAACGTTGTTGATCTGGTG 100615 Query 20100 GCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCG 20159 | | |||||||| || |||||| ||||| | ||| | ||| |||||| Sbjct 100616 GAATTCCTTCTTTATCCTGAATTTTAGCCTTCACATTTTCAATGGTATCTGAAGGTTCAA 100675 Query 20160 TTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 ||||| || || || |||||||| | ||||| |||||||||||||| Sbjct 100676 CTTCCAGCGTGATTGTCTTGCCGGTAAGAGTTTTAACAAAAATTTGCAT 100724 Score = 86.0 bits (94), Expect = 5e-12 Identities = 142/205 (69%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 20005 ATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTCCAATTG 20064 ||| | ||| ||||| ||||| || || ||||| | || |||||| ||||| Sbjct 100293 ATGCAATGTTGATTCCTTTTGGATATTATAATCAGAGAGGGTGCGCCCATCTTCTAATTG 100352 Query 20065 TTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGCAATTTT 20124 |||||| ||| |||| | ||||| ||||| || | ||||| || || |||||| Sbjct 100353 TTTGCCAGCAAAAATCAATCTCTGCTGATCTGGAGGAATTCCTTCCTTATCCTGAATTTT 100412 Query 20125 TTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTTGCCGGT 20184 ||| || | ||| || ||| ||||| ||||| ||||| ||||| || || Sbjct 100413 AGCTTTAACGTTTTCAATAGTATCTGATGGTTCAACTTCCAATGTAATTGTTTTCCCAGT 100472 Query 20185 CAACGTTTTGACAAAAATTTGCATT 20209 || ||||| ||||||||||||||| Sbjct 100473 TAAAGTTTTAACAAAAATTTGCATT 100497 >seq1631 Length=286364 Score = 105 bits (116), Expect = 6e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 20019 CTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAA 20078 |||||||||| |||||||| | |||| | ||||||||||||||| || ||| ||| Sbjct 119171 CTTTTTGTATATTGTAATCAGAGAGAGTTCTTCCATCTTCCAATTGTTTACCAGCAAAAA 119112 Query 20079 TAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGC 20138 |||||||||||||||| || | ||||||||||| |||||| |||||| | Sbjct 119111 TAAGCCTCTGTTGATCTGGAGGTATTCCTTCTTTGTCTTGAATTTTAGCTTTCACATTTT 119052 Query 20139 CAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAA 20198 | | || ||| ||||| || | |||||||||||| || || | || || || | Sbjct 119051 CGATAGTATCAGAGGGTTCTACCTCTAGGGTAATGGTTTTACCCGTGAGGGTCTTAACGA 118992 Query 20199 AAATTTGCATT 20209 | || |||||| Sbjct 118991 AGATCTGCATT 118981 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419524976267208