Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Halyomorpha_20halys_20[refseq_20GCF_5F000696795.1_202014-06-03]
12,168 sequences; 1,150,108,890 total letters
Query= NC_005137.2
Length=131160
Score E
Sequences producing significant alignments: (Bits) Value
seq1287 107 2e-18
seq1631 105 6e-18
>seq1287
Length=463317
Score = 107 bits (118), Expect = 2e-18
Identities = 152/214 (71%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 19996 CAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATC 20055
||| || ||||| || || ||||| || || ||||||||||| || ||| |||
Sbjct 100056 CAAAACTAAATGCAGGGTTGATTCCTTCTGGATGTTGTAATCAGACAAGGTTCGGCCATC 100115
Query 20056 TTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTC 20115
||| | |||||| || ||| ||||||| ||||| ||||| || | |||||||| ||
Sbjct 100116 TTCAAGTTGTTTCCCAGCAAAAATAAGTCTCTGCTGATCCGGTGGAATTCCTTCTTTATC 100175
Query 20116 GGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGT 20175
|||||| ||| || | ||| || || |||||| ||| | || || ||
Sbjct 100176 CTGAATTTTAGCTTTAACATTTTCAATAGTGTCAGAAGGTTCTACTTCTAGTGTGATTGT 100235
Query 20176 TTTGCCGGTCAACGTTTTGACAAAAATTTGCATT 20209
||| ||||| || ||||| |||||||||||||||
Sbjct 100236 TTTTCCGGTTAAAGTTTTAACAAAAATTTGCATT 100269
Score = 102 bits (112), Expect = 7e-17
Identities = 145/204 (71%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 20005 ATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTCCAATTG 20064
||||| ||| ||||||||||| || || |||||| | || | |||||| | |||
Sbjct 100977 ATGTAATGTGGATTCTTTTTGGATATTATAATCGGAGAGGGTACGACCATCTTCTAGTTG 101036
Query 20065 TTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGCAATTTT 20124
||| || ||| |||| | ||||||||||| || | |||||||| || ||||||
Sbjct 101037 TTTACCAGCAAAAATTAATCTCTGTTGATCAGGTGGAATTCCTTCTTTATCCTGAATTTT 101096
Query 20125 TTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTTGCCGGT 20184
|| || | ||| | ||| |||||| ||||| ||| ||||| ||||||||
Sbjct 101097 AGCCTTAACATTTTCAATGGTATCTGAAGGTTCAACTTCCAGGGTGATGGTCTTGCCGGT 101156
Query 20185 CAACGTTTTGACAAAAATTTGCAT 20208
|| ||||| || |||||||||||
Sbjct 101157 TAAAGTTTTAACGAAAATTTGCAT 101180
Score = 100 bits (110), Expect = 2e-16
Identities = 145/205 (71%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 20005 ATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTCCAATTG 20064
||| ||||| ||||||||||| || |||||||| | || ||||||||| ||
Sbjct 101661 ATGCAGTGTGGATTCTTTTTGAATATTGTAATCAGAAAGGGTGCGTCCATCTTCCAACTG 101720
Query 20065 TTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGCAATTTT 20124
||| || ||| | || ||||| || ||||| || | |||||||| || ||||||
Sbjct 101721 TTTTCCTGCAAAGATCAGCCTTTGCTGATCTGGCGGAATTCCTTCTTTATCCTGAATTTT 101780
Query 20125 TTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTTGCCGGT 20184
||| || | ||| || || ||||||| ||| | ||||||||||| || ||
Sbjct 101781 AGCTTTAACATTTTCAATAGTGTCAGAAGGTTCCACTTCTAATGTAATGGTTTTTCCTGT 101840
Query 20185 CAACGTTTTGACAAAAATTTGCATT 20209
| || ||||||||||||||||||
Sbjct 101841 TAGTGTCTTGACAAAAATTTGCATT 101865
Score = 100 bits (110), Expect = 2e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 19980 TTCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGC 20039
|||| || ||||| | || || ||||| || |||||||||||||| ||||| |||||
Sbjct 102320 TTCCACCACGTAAACGCAGGACTAAATGAAGAGTAGATTCTTTTTGAATGTTATAATCAG 102379
Query 20040 CCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGG 20099
| ||| |||||| | || || || ||| |||| | ||||||||||| |
Sbjct 102380 AAAGAGTACGTCCATCTTCAAGCTGCTTTCCAGCAAAAATCAATCTCTGTTGATCAGGAG 102439
Query 20100 GCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCG 20159
| | ||||| || || || ||| ||||| | ||| || ||| ||||||
Sbjct 102440 GGATACCTTCCTTATCTTGGATCTTTGCCTTCACATTTTCAATAGTATCTGAAGGTTCAA 102499
Query 20160 TTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATT 20209
||||| || || |||||||| |||| ||||| |||||||| ||||||
Sbjct 102500 CTTCCAGTGTGATTGTTTTGCCAGTCAGAGTTTTAACAAAAATCTGCATT 102549
Score = 98.7 bits (108), Expect = 8e-16
Identities = 159/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 19980 TTCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGC 20039
|||| |||| || | || |||||||| || |||||||| || || |||||||||||
Sbjct 100496 TTCCACCTCTCAAACGCAGGACCAAATGAAGAGTAGATTCCTTCTGAATGTTGTAATCAG 100555
Query 20040 CCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGG 20099
| ||| |||||| | |||||| || ||| |||| | | |||||||| |
Sbjct 100556 AAAGGGTTCGGCCATCTTCGAGTTGTTTTCCAGCAAAAATCAAACGTTGTTGATCTGGTG 100615
Query 20100 GCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCG 20159
| | |||||||| || |||||| ||||| | ||| | ||| ||||||
Sbjct 100616 GAATTCCTTCTTTATCCTGAATTTTAGCCTTCACATTTTCAATGGTATCTGAAGGTTCAA 100675
Query 20160 TTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208
||||| || || || |||||||| | ||||| ||||||||||||||
Sbjct 100676 CTTCCAGCGTGATTGTCTTGCCGGTAAGAGTTTTAACAAAAATTTGCAT 100724
Score = 86.0 bits (94), Expect = 5e-12
Identities = 142/205 (69%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 20005 ATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTCCAATTG 20064
||| | ||| ||||| ||||| || || ||||| | || |||||| |||||
Sbjct 100293 ATGCAATGTTGATTCCTTTTGGATATTATAATCAGAGAGGGTGCGCCCATCTTCTAATTG 100352
Query 20065 TTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGCAATTTT 20124
|||||| ||| |||| | ||||| ||||| || | ||||| || || ||||||
Sbjct 100353 TTTGCCAGCAAAAATCAATCTCTGCTGATCTGGAGGAATTCCTTCCTTATCCTGAATTTT 100412
Query 20125 TTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTTGCCGGT 20184
||| || | ||| || ||| ||||| ||||| ||||| ||||| || ||
Sbjct 100413 AGCTTTAACGTTTTCAATAGTATCTGATGGTTCAACTTCCAATGTAATTGTTTTCCCAGT 100472
Query 20185 CAACGTTTTGACAAAAATTTGCATT 20209
|| ||||| |||||||||||||||
Sbjct 100473 TAAAGTTTTAACAAAAATTTGCATT 100497
>seq1631
Length=286364
Score = 105 bits (116), Expect = 6e-18
Identities = 138/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 20019 CTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAA 20078
|||||||||| |||||||| | |||| | ||||||||||||||| || ||| |||
Sbjct 119171 CTTTTTGTATATTGTAATCAGAGAGAGTTCTTCCATCTTCCAATTGTTTACCAGCAAAAA 119112
Query 20079 TAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGC 20138
|||||||||||||||| || | ||||||||||| |||||| |||||| |
Sbjct 119111 TAAGCCTCTGTTGATCTGGAGGTATTCCTTCTTTGTCTTGAATTTTAGCTTTCACATTTT 119052
Query 20139 CAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAA 20198
| | || ||| ||||| || | |||||||||||| || || | || || || |
Sbjct 119051 CGATAGTATCAGAGGGTTCTACCTCTAGGGTAATGGTTTTACCCGTGAGGGTCTTAACGA 118992
Query 20199 AAATTTGCATT 20209
| || ||||||
Sbjct 118991 AGATCTGCATT 118981
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419524976267208
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |