Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Halyomorpha_20halys_20[refseq_20GCF_5F000696795.1_202014-06-03] 12,168 sequences; 1,150,108,890 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq91 150 2e-31 seq276 96.9 4e-15 >seq91 Length=3084333 Score = 150 bits (166), Expect = 2e-31 Identities = 229/323 (71%), Gaps = 10/323 (3%) Strand=Plus/Plus Query 6913 GTTAATAATGCATAAGAAGCTACATTAAAAGGTACACCTAATCCCATATCTGCTGATCTT 6972 ||||| ||||||||| ||| | |||||| || ||||||||||||||||| ||||||||| Sbjct 97731 GTTAAAAATGCATAACTAGCAATATTAAAGGGAACACCTAATCCCATATCAGCTGATCTT 97790 Query 6973 TGATAACATTGACAAGATAAAATATTGTCTATAG----CATAAAATTGACACAATACATG 7028 || || ||| || || || || || || | ||||||| || ||| ||| Sbjct 97791 TGGTACAGTTGGCAGGACAA----TTCTCCATTGGCAACATAAAACTGTGCCAAGCAATG 97846 Query 7029 ACATGGAGGTAAAACAGCCTGATCTATATCAGATGGATTCCAAGCAGTCATTAAAATACG 7088 |||||||| ||| | ||| |||||| || ||||| |||| | || || | Sbjct 97847 GCATGGAGGCAAAGCCATTTGAGGAATATCAACAGGGTTCCATGCAGATAATATCATCCT 97906 Query 7089 TCTATCATTTGGATTTGTTTTTAATTTTGTTATAATTATTTGTAATTGATCTATACCCTG 7148 ||||||| |||||| ||||| | | || || |||||| || || | |||||| Sbjct 97907 CCTATCATCTGGATTCTCTTTTATCATCTTAATGATACTTTGTAGCTGGTCAACACCCTG 97966 Query 7149 ACCTTCATAATTAGTATGACAATTTAT-ATAATTAGCTCCAAAATGTCTCCATTGAAACC 7207 |||| |||| || ||| || || | ||| | || |||||||||||||||||||| | Sbjct 97967 GCCTTGGTAATCAGAATG-CATGTTGTCATATCTGGCACCAAAATGTCTCCATTGAAAGC 98025 Query 7208 CATAAATAGGACCTAAATCACCT 7230 ||||||| || || | |||||| Sbjct 98026 CATAAATTGGGCCCAGGTCACCT 98048 Score = 86.0 bits (94), Expect = 7e-12 Identities = 129/181 (71%), Gaps = 2/181 (1%) Strand=Plus/Plus Query 6699 TGGATGAGGATTATAATCTAACAATTCAAAATCTTCAAATTTAAAATCACATAAATTATC 6758 || |||||||| ||| | ||| | || ||||||||||| |||||| | || ||| Sbjct 94418 TGCATGAGGATCATAGTTAGACACTATAATGTCTTCAAATTTGAAATCATCAATATCATC 94477 Query 6759 AGACtttttttttAATATTACAACAGGTGAAGGTTTTATTGA-TCGAGTTAATTGTTCTT 6817 | || || | ||| | ||| ||||| |||| | |||||||| |||||||| Sbjct 94478 GATCCTTCTTCTAAATGAAATGGTAGG-GAAGGCTTTAGGTACTCGAGTTATTTGTTCTT 94536 Query 6818 TTATAGCTTTTATATGATCTAAATAAATATGAGCATCTCCTAGCGTATGAATAAATTCAC 6877 | |||||||| ||||| ||||| ||||| ||||||| ||||||||||| |||| Sbjct 94537 GCAAAGCTTTTACATGATTCAAATAGATATGGCTGTCTCCTAAAGTATGAATAAAATCAC 94596 Query 6878 C 6878 | Sbjct 94597 C 94597 >seq276 Length=734573 Score = 96.9 bits (106), Expect = 4e-15 Identities = 95/123 (77%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 164785 CATGATGCAGTGGTTAATCAGTTGCTTTCTAAAATAGATGGTGTAGAATCCTTAAATAAT 164844 |||||| | || || |||||| | || ||||||||||||||||| || ||||||||| Sbjct 582262 CATGATACTGTAGTCAATCAGCTTCTGTCTAAAATAGATGGTGTTGATCAGTTAAATAAT 582203 Query 164845 ATTTTAATTGTAGGTATGACCAACCGACCTGATTTAATTGATGATGCTTTATTACGACCT 164904 ||||| ||| | || ||||| ||| || ||| | ||||| || |||||| | ||||| Sbjct 582202 ATTTTGATTATTGGAATGACAAACAGAAGAGATATGATTGACGAAGCTTTACTCAGACCT 582143 Query 164905 GGT 164907 ||| Sbjct 582142 GGT 582140 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595781367868800