Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Halyomorpha_20halys_20[refseq_20GCF_5F000696795.1_202014-06-03] 12,168 sequences; 1,150,108,890 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq1001 131 9e-26 seq943 127 1e-24 seq939 127 1e-24 seq1892 125 4e-24 seq11224 123 1e-23 seq1973 120 2e-22 seq155 118 6e-22 seq162 116 2e-21 seq94 113 2e-20 >seq1001 Length=684889 Score = 131 bits (144), Expect = 9e-26 Identities = 85/93 (91%), Gaps = 2/93 (2%) Strand=Plus/Plus Query 11437 AATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTA 11496 |||||| ||||||||| ||||||||||| |||||||||| ||||||||||||||||| Sbjct 648556 AATTAAAAAAAAATCA--TTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTA 648613 Query 11497 GCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||||||| |||||||||||||||||||| Sbjct 648614 GCACGACGCTCTAACCAACTGAGCTAATGGGCC 648646 >seq943 Length=771520 Score = 127 bits (140), Expect = 1e-24 Identities = 82/89 (92%), Gaps = 1/89 (1%) Strand=Plus/Plus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 |||||||||| |||| ||||||||| |||||||||| ||||||||||||||||||||| Sbjct 687499 AATAAAAAATTAAAT-GGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCAC 687557 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||| |||||||||||||||||||| Sbjct 687558 GACGCTCTAACCAACTGAGCTAATGGGCC 687586 >seq939 Length=588158 Score = 127 bits (140), Expect = 1e-24 Identities = 91/104 (88%), Gaps = 1/104 (1%) Strand=Plus/Minus Query 11426 GGGAAATATAGAATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCT 11485 |||||||| | |||||| |||||| | |||||||||| |||||||||| |||||| Sbjct 43649 GGGAAATA-ATAATTAAAAAAAAAAATATATGGCCCATGAGGGGATCGAACCCGCGACCT 43591 Query 11486 TCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||||||||||||||||| |||||||||||||||||||| Sbjct 43590 TCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCC 43547 >seq1892 Length=221798 Score = 125 bits (138), Expect = 4e-24 Identities = 84/93 (90%), Gaps = 1/93 (1%) Strand=Plus/Plus Query 11437 AATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTA 11496 ||||| |||||||| | ||||||||||| |||||||||| ||||||||||||||||| Sbjct 108910 AATTA-TAAAAAATTTAGTTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTA 108968 Query 11497 GCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||||||| |||||||||||||||||||| Sbjct 108969 GCACGACGCTCTAACCAACTGAGCTAATGGGCC 109001 Score = 123 bits (136), Expect = 1e-23 Identities = 81/89 (91%), Gaps = 2/89 (2%) Strand=Plus/Plus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 || |||||||||| |||||||||| |||||||||| ||||||||||||||||||||| Sbjct 63543 AAAAAAAAATCAA--TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCAC 63600 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||| |||||||||||||||||||| Sbjct 63601 GACGCTCTAACCAACTGAGCTAATGGGCC 63629 Score = 120 bits (132), Expect = 2e-22 Identities = 79/87 (91%), Gaps = 1/87 (1%) Strand=Plus/Minus Query 11443 TAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGA 11502 |||||||| | ||||||||||| |||||||||| ||||||||||||||||||||||| Sbjct 98054 TAAAAAATTAT-TTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGA 97996 Query 11503 CGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||| |||||||||||||||||||| Sbjct 97995 CGCTCTAACCAACTGAGCTAATGGGCC 97969 Score = 116 bits (128), Expect = 2e-21 Identities = 77/85 (91%), Gaps = 2/85 (2%) Strand=Plus/Plus Query 11445 AAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACG 11504 ||||| ||| |||||||||| |||||||||| ||||||||||||||||||||||||| Sbjct 134077 AAAAA--AAAGTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACG 134134 Query 11505 CTCTRACCAACTGAGCTAATGGGCC 11529 |||| |||||||||||||||||||| Sbjct 134135 CTCTAACCAACTGAGCTAATGGGCC 134159 >seq11224 Length=1189 Score = 123 bits (136), Expect = 1e-23 Identities = 84/94 (89%), Gaps = 2/94 (2%) Strand=Plus/Plus Query 11436 GAATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATT 11495 ||||| ||||||| ||||||||||||| |||||||||| |||||||||||||||| Sbjct 707 GAATTTTAAAAAAAT--AATTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATT 764 Query 11496 AGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||||||| |||||||||||||||||||| Sbjct 765 AGCACGACGCTCTAACCAACTGAGCTAATGGGCC 798 Score = 120 bits (132), Expect = 2e-22 Identities = 80/89 (90%), Gaps = 2/89 (2%) Strand=Plus/Minus Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 || ||||||| || |||||||||| |||||||||| ||||||||||||||||||||| Sbjct 247 AAAAAAAAATTAA--TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCAC 190 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||| |||||||||||||||||||| Sbjct 189 GACGCTCTAACCAACTGAGCTAATGGGCC 161 >seq1973 Length=74275 Score = 120 bits (132), Expect = 2e-22 Identities = 83/94 (88%), Gaps = 2/94 (2%) Strand=Plus/Minus Query 11436 GAATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATT 11495 ||||| | ||||||| | |||||||||| |||||||||| |||||||||||||||| Sbjct 72665 GAATTTAAAAAAAATTAG--TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATT 72608 Query 11496 AGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||||||| |||||||||||||||||||| Sbjct 72607 AGCACGACGCTCTAACCAACTGAGCTAATGGGCC 72574 Score = 114 bits (126), Expect = 7e-21 Identities = 77/86 (90%), Gaps = 2/86 (2%) Strand=Plus/Plus Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 ||||||| | |||||||||| |||||||||| |||||||||||||||||||||||| Sbjct 74023 AAAAAATTAG--TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGAC 74080 Query 11504 GCTCTRACCAACTGAGCTAATGGGCC 11529 ||||| |||||||||||||||||||| Sbjct 74081 GCTCTAACCAACTGAGCTAATGGGCC 74106 >seq155 Length=2150701 Score = 118 bits (130), Expect = 6e-22 Identities = 80/90 (89%), Gaps = 3/90 (3%) Strand=Plus/Minus Query 11444 AAAAAATCAAATT---GGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500 |||||| ||||| ||||||||| |||||||||| ||||||||||||||||||||| Sbjct 1811989 AAAAAAAAAAATTAGTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCAC 1811930 Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCCG 11530 |||||||| ||||||||||||||||||||| Sbjct 1811929 GACGCTCTAACCAACTGAGCTAATGGGCCG 1811900 >seq162 Length=761772 Score = 116 bits (128), Expect = 2e-21 Identities = 80/90 (89%), Gaps = 2/90 (2%) Strand=Plus/Plus Query 11442 ATAAAAAATCAAATT--GGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCA 11499 ||| |||| ||||| ||||||||| |||||||||| |||||||||||||||||||| Sbjct 667028 ATAGAAAAAAAAATTATGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCA 667087 Query 11500 CGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||| |||||||||||||||||||| Sbjct 667088 CGACGCTCTAACCAACTGAGCTAATGGGCC 667117 >seq94 Length=2836508 Score = 113 bits (124), Expect = 2e-20 Identities = 69/74 (93%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 2575624 TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 2575683 Query 11516 TGAGCTAATGGGCC 11529 |||||||||||||| Sbjct 2575684 TGAGCTAATGGGCC 2575697 Lambda K H 0.638 0.410 0.920 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261452421508768