Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Halyomorpha_20halys_20[refseq_20GCF_5F000696795.1_202014-06-03] 12,168 sequences; 1,150,108,890 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq1287 147 2e-30 seq1631 93.3 4e-14 >seq1287 Length=463317 Score = 147 bits (162), Expect = 2e-30 Identities = 170/229 (74%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 |||||||| || || | || || || || || ||||| || || | |||||||| Sbjct 103006 CCTCCTCTTAAACGAAGTACTAAATGTAAGGTTGATTCTTTCTGAATATTATAATCTGAA 103065 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | ||| | ||| || ||||| ||||| |||| |||||||| || || ||||| ||| Sbjct 103066 AGGGTGCGGCCATCTTCAAGCTGCTTTCCAGCAAAAATTAATCTCTGTTGGTCTGGGGGA 103125 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 || ||||||||||| | ||||| |||||||| ||| ||||||| | || || Sbjct 103126 ATTCCTTCTTTGTCTTGGATTTTAGCCTTGACATTTTCGATTGTGTCAGAAGGTTCAACT 103185 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 || | ||||| ||||| |||||||||||||| |||||||||||||||| Sbjct 103186 TCTAAAGTGATTGTTTTGCCAGTAAGAGTTTTAACAAAGATCTGCATGC 103234 Score = 136 bits (150), Expect = 4e-27 Identities = 174/240 (73%), Gaps = 0/240 (0%) Strand=Plus/Plus Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827 |||| | | || ||||||||| | || | || || || ||||||||||| || || | Sbjct 102537 AAAAATCTGCATTCCTCCTCTAAGACGAAGTACTAAATGTAAAGTAGATTCTTTCTGAAT 102596 Query 94828 GTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTG 94887 ||| ||||| | ||| | ||| || ||||| ||||| |||| |||||||| || Sbjct 102597 GTTGTAATCTGAAAGAGTACGGCCATCTTCAAGCTGCTTTCCAGCAAATATTAATCTCTG 102656 Query 94888 CTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTC 94947 || |||||||| || ||||||||||| | |||||| |||||||| ||| ||||| Sbjct 102657 TTGGTCTGGAGGGATTCCTTCTTTGTCTTGAATTTTAGCCTTGACATTTTCGATTGTGTC 102716 Query 94948 AGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || | || || || | || || ||||| ||||| | |||||| ||||| || ||||| Sbjct 102717 AGAAGGCTCAACTTCCAATGTAATTGTTTTACCAGTTAAAGTTTTAACAAAAATTTGCAT 102776 Score = 134 bits (148), Expect = 1e-26 Identities = 176/242 (73%), Gaps = 4/242 (2%) Strand=Plus/Plus Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827 |||| ||| || ||| |||||||| |||| ||||| || | |||||||||||| || | Sbjct 100485 AAAAATTTGCATTCCACCTCTCAAACGCAGGACCAAATGAAGAGTAGATTCCTTCTGAAT 100544 Query 94828 GTTATAATCGCTCATAGTGTT--GGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTT 94885 ||| |||| | | || ||| | ||| || || |||||||| |||| || || | | Sbjct 100545 GTTGTAAT--CAGAAAGGGTTCGGCCATCTTCGAGTTGTTTTCCAGCAAAAATCAAACGT 100602 Query 94886 TGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTG 94945 || |||||||| ||||| |||||||| || | |||||| ||||| || | | || Sbjct 100603 TGTTGATCTGGTGGAATTCCTTCTTTATCCTGAATTTTAGCCTTCACATTTTCAATGGTA 100662 Query 94946 TCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGC 95005 || | | || || || | |||||| || || || ||||||||||| ||||| || ||| Sbjct 100663 TCTGAAGGTTCAACTTCCAGCGTGATTGTCTTGCCGGTAAGAGTTTTAACAAAAATTTGC 100722 Query 95006 AT 95007 || Sbjct 100723 AT 100724 Score = 132 bits (146), Expect = 4e-26 Identities = 168/229 (73%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 |||||||||| || | |||||| || || |||||||| || || | |||||||| | Sbjct 103234 CCTCCTCTCAGACGAAGCACCAAATGTAATGTAGATTCTTTCTGAATATTATAATC--TG 103291 Query 94841 ATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAG 94898 | ||||| | ||| || ||||| ||||| |||| |||||||| || || ||||| | Sbjct 103292 AAAGTGTGCGGCCATCTTCAAGCTGCTTTCCAGCAAAAATTAATCTCTGTTGGTCTGGGG 103351 Query 94899 GAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGA 94958 |||| ||||||||||| | |||||| ||||| || | | ||||||| | || | Sbjct 103352 GAATTCCTTCTTTGTCTTGAATTTTGGCCTTAACATTTTCTATTGTGTCAGAAGGCTCAA 103411 Query 94959 CGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | || | || || ||||| || ||||| || || || ||||||||||| Sbjct 103412 CTTCTAATGTAATTGTTTTGCCGGTAAGTGTCTTGACGAAGATCTGCAT 103460 Score = 123 bits (136), Expect = 2e-23 Identities = 175/244 (72%), Gaps = 4/244 (2%) Strand=Plus/Plus Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827 |||| ||| || |||||||| | || | || | || || || ||||||||||| | Sbjct 100713 AAAAATTTGCATACCTCCTCTAAGACGAAGTACAAGATGTAAGGTGGATTCCTTTTGAAT 100772 Query 94828 GTTATAATCGCTCATAGTGTT--GGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTT 94885 || |||| || | || ||| | ||| || ||||| ||||| |||| || ||||| Sbjct 100773 ATTGTAAT--CTGAAAGGGTTCGGCCATCTTCAAGCTGCTTTCCAGCAAAAATCAATCTC 100830 Query 94886 TGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTG 94945 || ||||| || ||||| |||||||| || | |||||| || || ||| | | ||| Sbjct 100831 TGTTGATCCGGTGGAATTCCTTCTTTATCCTGAATTTTGGCTTTAACGTTCTCAATAGTA 100890 Query 94946 TCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGC 95005 |||| | || || || | ||||| || |||||||| |||||||| ||||| || ||| Sbjct 100891 TCAGATGGCTCAACTTCCAAAGTGATAGTCTTTCCAGTGAGAGTTTTAACAAAAATTTGC 100950 Query 95006 ATGC 95009 |||| Sbjct 100951 ATGC 100954 Score = 118 bits (130), Expect = 1e-21 Identities = 170/240 (71%), Gaps = 0/240 (0%) Strand=Plus/Plus Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827 |||| ||| || ||||||||||| || | || | ||||| || ||||||||||| | Sbjct 100257 AAAAATTTGCATTCCTCCTCTCAGACGAAGTACAAGATGCAATGTTGATTCCTTTTGGAT 100316 Query 94828 GTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTG 94887 |||||||| | ||| ||| || | ||||| || |||| || ||||| || Sbjct 100317 ATTATAATCAGAGAGGGTGCGCCCATCTTCTAATTGTTTGCCAGCAAAAATCAATCTCTG 100376 Query 94888 CTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTC 94947 ||||||||||||||| ||||| || || | |||||| || || ||| | | ||| || Sbjct 100377 CTGATCTGGAGGAATTCCTTCCTTATCCTGAATTTTAGCTTTAACGTTTTCAATAGTATC 100436 Query 94948 AGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | | || || || | || || ||||| ||||| | |||||| ||||| || ||||| Sbjct 100437 TGATGGTTCAACTTCCAATGTAATTGTTTTCCCAGTTAAAGTTTTAACAAAAATTTGCAT 100496 Score = 116 bits (128), Expect = 3e-21 Identities = 171/242 (71%), Gaps = 0/242 (0%) Strand=Plus/Plus Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827 |||| ||| || ||| ||||||| || || |||| || | |||||||||||| || | Sbjct 102765 AAAAATTTGCATTCCACCTCTCAGACGTAAGACCAGATGAAGAGTAGATTCCTTCTGGAT 102824 Query 94828 GTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTG 94887 || ||||| || || | ||| || || ||||| || |||| || | |||||| Sbjct 102825 ATTGTAATCTGACAAGGTACGGCCATCTTCTAGTTGTTTGCCAGCAAAAATCAGTCTTTG 102884 Query 94888 CTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTC 94947 || ||||| ||||| |||||||| || | |||||| ||||| || | | ||||| Sbjct 102885 TTGGTCTGGTGGAATTCCTTCTTTATCTTGAATTTTGGCCTTAACATTTTCAATTGTGTC 102944 Query 94948 AGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | | || || || | || || ||||| || || ||||| || || ||||||||||| Sbjct 102945 TGAAGGCTCAACTTCTAATGTAATTGTTTTACCGGTTAGAGTCTTGACGAAGATCTGCAT 103004 Query 95008 GC 95009 || Sbjct 103005 GC 103006 Score = 111 bits (122), Expect = 1e-19 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 94777 CACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATC 94836 || ||||||||| || || | || || || || || ||||| || || | |||||||| Sbjct 101406 CATTCCTCCTCTTAAACGAAGTACTAAATGTAAGGTTGATTCTTTCTGGATATTATAATC 101465 Query 94837 GCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGG 94896 | ||| | ||| || || ||||| || | || || | ||| |||||||| || Sbjct 101466 AGAGAGGGTGCGGCCATCTTCTAGTTGTTTACCAGCGAAAATCAGTCTCTGCTGATCAGG 101525 Query 94897 AGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTC 94956 |||||||||||||| || | |||||| || || || | | || |||| | || Sbjct 101526 TGGAATACCTTCTTTATCCTGAATTTTAGCTTTAACATTTTCTATGGTATCAGATGGTTC 101585 Query 94957 GACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || | || || ||||| ||||| | ||||||||||||||||||||| Sbjct 101586 AACTTCCAAGGTTATAGTTTTGCCAGTTAAAGTTTTCACAAAGATCTGCAT 101636 Score = 109 bits (120), Expect = 5e-19 Identities = 168/240 (70%), Gaps = 0/240 (0%) Strand=Plus/Plus Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827 |||| ||| || ||| || | || || | || || || || || |||||||| || | Sbjct 101853 AAAAATTTGCATTCCACCACGTAAACGTAGAACTAAATGTAAGGTTGATTCCTTCTGAAT 101912 Query 94828 GTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTG 94887 ||||||||| || ||| ||| |||| ||||||||| ||||||| || | ||| Sbjct 101913 GTTATAATCAGACAGAGTACGACCATCTTCCAACTGTTTTCCTGCAAAGATCAAACGTTG 101972 Query 94888 CTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTC 94947 ||||||||| |||||||| || || || | |||||| || || || | | || || Sbjct 101973 CTGATCTGGTGGAATACCCTCCTTATCTTGAATTTTAGCTTTAACATTTTCAATTGTATC 102032 Query 94948 AGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || | || || || | || || || ||||| || | ||| |||||||| || ||||| Sbjct 102033 AGAAGGTTCCACTTCCAATGTAATCGTCTTTCCTGTTAAAGTCTTCACAAATATTTGCAT 102092 Score = 107 bits (118), Expect = 2e-18 Identities = 171/242 (71%), Gaps = 5/242 (2%) Strand=Plus/Plus Query 94769 AAAT-TTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827 |||| ||| || || |||| || |||| || | || | ||| || || ||||| | Sbjct 102081 AAATATTTGCATACCACCTCGCAGCCGCAGTACAAGATGAAGAGTGGACTCTTTTTGAAT 102140 Query 94828 GTTATAATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTT 94885 |||||||| | | || ||| | ||| || || |||||||| |||| ||||| | Sbjct 102141 ATTATAATC--TGAAAGGGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAAATTAAACGC 102198 Query 94886 TGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTG 94945 ||||| || || || || |||||||| || | |||||| || ||||| | | |||| Sbjct 102199 TGCTGGTCAGGGGGTATTCCTTCTTTATCTTGAATTTTCGCTTTGACATTTTCAATAGTG 102258 Query 94946 TCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGC 95005 |||| | || || || | |||||| || || || ||||||||||| ||||| || ||| Sbjct 102259 TCAGATGGTTCAACTTCCAGCGTGATTGTCTTGCCGGTAAGAGTTTTAACAAATATTTGC 102318 Query 95006 AT 95007 || Sbjct 102319 AT 102320 Score = 105 bits (116), Expect = 6e-18 Identities = 169/241 (70%), Gaps = 4/241 (2%) Strand=Plus/Plus Query 94769 AAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACG 94828 ||| ||| || || |||| || |||| || | || | ||| || || ||||| | Sbjct 101170 AAAATTTGCATACCACCTCGCAGCCGCAGTACAAGATGAAGAGTGGACTCTTTTTGTATA 101229 Query 94829 TTATAATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTT 94886 |||||||| | | || ||| | ||| || || |||||||| | ||||| || | | Sbjct 101230 TTATAATC--TGACAGGGTTCGGCCATCTTCGAGTTGTTTTCCAGCGAAGATCAAACGCT 101287 Query 94887 GCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGT 94946 |||| || |||||||| |||||||| || | |||||| ||||| || ||| |||| Sbjct 101288 GCTGGTCAGGAGGAATTCCTTCTTTATCTTGAATTTTAGCCTTAACATTTTCGATGGTGT 101347 Query 94947 CAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCA 95006 | | | || || || | || || ||||| ||||| ||||| || || |||||||||| Sbjct 101348 CTGAAGGCTCAACTTCTAATGTAATCGTTTTACCAGTTAGAGTCTTGACGAAGATCTGCA 101407 Query 95007 T 95007 | Sbjct 101408 T 101408 Score = 105 bits (116), Expect = 6e-18 Identities = 117/156 (75%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 ||| |||| ||||||||| ||||||| | |||||||||||||| ||||| |||||||| Sbjct 101709 ATCTTCCAACTGTTTTCCTGCAAAGATCAGCCTTTGCTGATCTGGCGGAATTCCTTCTTT 101768 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971 || | |||||| || || || | | |||||||| | || || || | || || Sbjct 101769 ATCCTGAATTTTAGCTTTAACATTTTCAATAGTGTCAGAAGGTTCCACTTCTAATGTAAT 101828 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||||||| || || || || ||||| || ||||| Sbjct 101829 GGTTTTTCCTGTTAGTGTCTTGACAAAAATTTGCAT 101864 >seq1631 Length=286364 Score = 93.3 bits (102), Expect = 4e-14 Identities = 116/159 (73%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 ||| |||| ||||| || |||| || | || || ||||||||||| || |||||||| Sbjct 119137 ATCTTCCAATTGTTTACCAGCAAAAATAAGCCTCTGTTGATCTGGAGGTATTCCTTCTTT 119078 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971 ||| | |||||| || || || ||| ||| |||| | | || || || | || || Sbjct 119077 GTCTTGAATTTTAGCTTTCACATTTTCGATAGTATCAGAGGGTTCTACCTCTAGGGTAAT 119018 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGCT 95010 |||||| || || || || || || ||||||||||| || Sbjct 119017 GGTTTTACCCGTGAGGGTCTTAACGAAGATCTGCATTCT 118979 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448223014908480