Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Halyomorpha_20halys_20[refseq_20GCF_5F000696795.1_202014-06-03] 12,168 sequences; 1,150,108,890 total letters Query= NC_006658.1 Length=30655 Score E Sequences producing significant alignments: (Bits) Value seq1417 132 9e-27 seq966 120 6e-23 seq2085 113 9e-21 seq2123 109 1e-19 seq2542 98.7 2e-16 seq952 86.0 1e-12 >seq1417 Length=159237 Score = 132 bits (146), Expect = 9e-27 Identities = 159/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 7269 TGGCATGTCCGTATTGACATGATCATCATAAATATGCTTCAGATTCATTTCATCTTGACG 7328 || |||||| | |||||||||||||| ||||| || ||| ||| | ||||||||| | Sbjct 84883 TGACATGTCTGAGTTGACATGATCATCGTAAATTCGCCTCAAATTTAATTCATCTTGTCT 84824 Query 7329 GAACAGCACGAGAAAGTTTGCATTATCTCTAATCAGGTGCTTGGGTATTCGTGTATAAGT 7388 || || | |||||||| ||||| |||||||| | || ||||| | || |||||| | Sbjct 84823 AAAGAGTATTAGAAAGTTAGCATTTTCTCTAATTAAATGTTTGGGAACTCTAGTATAACT 84764 Query 7389 TTGACAGAGATAGAAGCTGTCAACATCCTTGTGTCGACCCATGCAGAAAAAAGCTTTGAT 7448 || | ||||| || | ||||| | ||||| || |||||||| ||| ||| | | | Sbjct 84763 CTGGCTAAGATAAAATATATCAACCCCATTGTGGCGCCCCATGCAAAAATAAGATCTTAC 84704 Query 7449 GTGATCCTGTTTTTCACAAGCAACATCGTCAAATAT 7484 | || ||||| ||||| |||| ||| || ||||| Sbjct 84703 ATTGTCTTGTTTATCACAGGCAATATCATCGAATAT 84668 >seq966 Length=247175 Score = 120 bits (132), Expect = 6e-23 Identities = 131/174 (75%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 7268 ATGGCATGTCCGTATTGACATGATCATCATAAATATGCTTCAGATTCATTTCATCTTGAC 7327 ||| |||||| | |||||||||||||| ||||| || ||| ||| | ||||||||| | Sbjct 161033 ATGACATGTCTGAGTTGACATGATCATCGTAAATTCGCCTCAAATTTAATTCATCTTGTC 161092 Query 7328 GGAACAGCACGAGAAAGTTTGCATTATCTCTAATCAGGTGCTTGGGTATTCGTGTATAAG 7387 || || | |||||||| ||||| |||||||| | || ||||| | || |||||| Sbjct 161093 TAAAGAGTATTAGAAAGTTAGCATTTTCTCTAATTAAATGTTTGGGAACTCTAGTATAAC 161152 Query 7388 TTTGACAGAGATAGAAGCTGTCAACATCCTTGTGTCGACCCATGCAGAAAAAAG 7441 | || | ||||| || ||||||| ||||| || |||||||||||| ||| Sbjct 161153 TCTGGCTAAGATAAAATATGTCAACCCTATTGTGGCGCCCCATGCAGAAATAAG 161206 >seq2085 Length=39782 Score = 113 bits (124), Expect = 9e-21 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 7268 ATGGCATGTCCGTATTGACATGATCATCATAAATATGCTTCAGATTCATTTCATCTTGAC 7327 ||| |||||| | |||||||||||||| ||||| || ||| ||| | ||||||||| | Sbjct 25502 ATGACATGTCTGAGTTGACATGATCATCGTAAATTCGCCTCAAATTTAATTCATCTTGTC 25443 Query 7328 GGAACAGCACGAGAAAGTTTGCATTATCTCTAATCAGGTGCTTGGGTATTCGTGTATAAG 7387 || || | |||||||| ||||| |||||||| | || ||||| | || |||||| Sbjct 25442 TAAAGAGTATTAGAAAGTTAGCATTTTCTCTAATTAAATGTTTGGGAACTCTAGTATAAC 25383 Query 7388 TTTGACAGAGATAGAAGCTGTCAACATCCTTGTGTCGACCCATGCAGAAAAAAGCTTTGA 7447 | || | ||||| || | ||||| | ||||| || |||||||| | | ||| | | | Sbjct 25382 TCTGGCTAAGATAAAATATATCAACCCCATTGTGACGCCCCATGCAAATATAAGATCTTA 25323 Query 7448 TGTGATCCTGTTTTTCA 7464 | || ||||| ||| Sbjct 25322 CATTGTCTTGTTTATCA 25306 >seq2123 Length=36684 Score = 109 bits (120), Expect = 1e-19 Identities = 224/326 (69%), Gaps = 9/326 (3%) Strand=Plus/Minus Query 7164 GAATCCTTTCCGATACCTACCACTCTTCAATTCACTGTCTTTATCTATTACCACAAATCC 7223 ||| ||||| || || | |||| | | ||| |||| |||||||| ||||||| |||||| Sbjct 735 GAACCCTTTACGGTATCGACCATTGTCCAAGTCACGATCTTTATCAATTACCATAAATCC 676 Query 7224 ATATTTATT---CCAACATGCCGAGCATAAATCTCTGAATGAGTTGTATGGCATGTCCGT 7280 |||| |||| ||||||| | ||||| | | | ||| | | ||| || | Sbjct 675 ATATATATTTTTCCAACATTCTC--CATAATTTTTTAAATTCTGAAAACGACATATCAGA 618 Query 7281 ATTGACATGATCATCATAAATATGCTTCAG-ATTCATTTCATCTTGACGGAACAGCACGA 7339 ||| ||||| || | || || | || || | | | ||||| || | ||| | | | Sbjct 617 ATTAACATGGTCTTTGTATAT-TCTTTTAGTAATGAGATCATCCTGTCTGAATACTATCA 559 Query 7340 GAAAGTTTGCATTATCTCTAATCAGGTGCTTGGGTATTCGTGTATAAGTTTGACAGAGAT 7399 |||||||||||||||| | ||| | | || |||| || || || || | |||||||| Sbjct 558 GAAAGTTTGCATTATCACAAATTAATAGTTTTGGTACGCGGGTGTAGGTGTTACAGAGAT 499 Query 7400 AGAAGCTGTCAACATCCT-TGTGTCGACCCATGCAGAAAAAAGCTTTGATGTGATCCTGT 7458 | |||||||| || |||| | |||| |||||| | || | ||| ||| | | ||| Sbjct 498 AAAAGCTGTCTAC-TCCTCTATGTCTACCCATAAAAAAGTATGCTCTGACTCAACCTTGT 440 Query 7459 TTTTCACAAGCAACATCGTCAAATAT 7484 || || ||||| | ||| || || || Sbjct 439 TTATCGCAAGCGATATCATCGAAAAT 414 >seq2542 Length=19760 Score = 98.7 bits (108), Expect = 2e-16 Identities = 562/892 (63%), Gaps = 49/892 (5%) Strand=Plus/Minus Query 3817 TTTTATTCAAAATTAACTAATTCTACCATTTCCGATGACGATTATGCTTTTGCTCAAGTA 3876 |||||||||| | | | ||| || | |||||| |||| ||||| | ||| || || Sbjct 7064 TTTTATTCAAGACTTAATAAATCAAACATTTCTAATGAAGATTACGAACGTGCAAAACTA 7005 Query 3877 GTCTGGAACGAGTTTAAAATCAATACGCTTGGAGAGTACTCGGACTTATACTTAAAGACT 3936 || |||||| ||||||| || || | | | ||| || | | || || || || Sbjct 7004 GTTTGGAACAAGTTTAATATTAAAAACTTAGAAGAATATACAAAATTGTATAACAAATCT 6945 Query 3937 GATGTCCTTCTCTTGACTGATGTCTTTGAAAACTTTAGACGTAGTTGTTTCAAGACATAC 3996 ||||| | | || | || | |||||||| |||||| || ||| | || |||| Sbjct 6944 GATGTTTTAATATTAGCAGACATTTTTGAAAATTTTAGAGATACATGTATTAAAGCATAT 6885 Query 3997 AATTTAGACGCACTACACTTTTATACAGCACCAGGTCTTTCGAACGCTGCAATGTTAAAG 4056 || |||| | | || ||| |||||||| | ||| | |||||||||||| Sbjct 6884 AAACTAGATCCGTCTTGGTATTTTACTGCACCAGGATTATCGTGGGATGCAATGTTAAAA 6825 Query 4057 CATACTGAAGTAGAACTTGAACTGTTAACTGATCCTGAGATGCTTCTTTTCATTGAAAAG 4116 ||| || | ||| | || | || | |||| ||| ||| || | | ||||||| Sbjct 6824 ATAACTAAAATTGAATTAGATTTATTGAATGATTATGATATGATTTTAATGCTTGAAAAA 6765 Query 4117 GGTGTTCGCGGTGGGGTATCGATGTGTGCTAATAGACATGCTGAAGCTAACAACCGGTAT 4176 || |||| ||||| | || || ||| ||| |||| ||||||| || ||| Sbjct 6764 GGAATTCGTGGTGGAATTTCACAAAGTATTAAAAGATATGCAAAAGCTAATAATAAATAT 6705 Query 4177 ATGGGCAAAGATTTTGATTC-AAACAACCCCGAAACA---TACCTGATGTACTATGATGT 4232 ||| ||| ||| | |||| ||| || |||||| || | ||| |||| Sbjct 6704 ATG---AAAAATTATAATTCTAAAGAA----GAAACAAGTTATTTAGAATACCTAGATGC 6652 Query 4233 AAATAATTTGTATGGCGCAGCGATGAGTATGTCTTTACCAAAGGGTAAATTTGAATGGGT 4292 ||| ||| | ||||| || ||| | ||||||| | || |||||||||| | Sbjct 6651 AAACAATCTCTATGGTTGGGCAATGTCACAATATTTACCATATGGAGGATTTGAATGGTT 6592 Query 4293 TGAAAA------TGTAGATGATGTA--GATCA--GTTTTTCAATGATGATGAGAGTGTAG 4342 | || | | ||||| | ||| | | | | | ||| || | | | | Sbjct 6591 AAATAACAATTATTTCAATGATAAAAAGATAAAAGAAATACCA-GATAATTATAAATTTG 6533 Query 4343 GCTACATCCTTGAAGTAGATCTACACTATCCTGAGAATTTACATGATCTACACAAAGATC 4402 | || || ||||||| ||| || | ||||| | | ||||||||| | || |||||| Sbjct 6532 GTTATATATTTGAAGTTGATTTAGAATATCCAAAAGAATTACATGATTTGCATAAAGATT 6473 Query 4403 TACCTTTATGCCCAGAACATTTTGTACCACCTGGTAGCAAGCAACAAAA-ACTCACGACA 4461 |||| || ||| |||| | || | | || ||| ||| || ||| Sbjct 6472 TACC------------AC---TTGCACCA----GAAGGAGGAAATAAATTACTAACAACA 6432 Query 4462 ACTCTGTACGATAAAAATAATTATGTTATTCACTATAAAAATTTGAAACAATGTTTAGAT 4521 | | | ||| | || |||||| | || |||| |||||| ||| ||| |||| || Sbjct 6431 T---TAAATAACAAAGAAAAATATGTTTTACATTATAGAAATTTAAAAAAATATTTATAT 6375 Query 4522 TTAGGTTTAGTTCTTAAGAAAATACACCTAGTCTTGAAATTTGAGCAATCAGACTGGCTC 4581 | |||||| | | ||||| || ||| || | ||| | |||||||| | || Sbjct 6374 CTTGGTTTAAAGTTAACAAAAATTCATAGAGTTTTAACTTTTAAACAATCAGATTATCTA 6315 Query 4582 AAATCATATATCGATAAAAATACCGCATGCCGAAAACTA--GCTAAGAATGAGTTCGaaa 4639 || |||||| ||| ||||| | | || ||||| || | ||||| || |||| Sbjct 6314 AAGAAATATATAGATTTGAATACTGAAAT--GAGAACTAAAGCAACTAATGATTTTGAAA 6257 Query 4640 aaaaCTTTTATAAATTAATGAATAATGCGGTTTTTGGAAAGACGATGGAGAA 4691 || | || || || ||||||||||| | || ||||| || || ||||| || Sbjct 6256 AAGATTTCTACAAGTTAATGAATAACTCAGTATTTGGTAAAACAATGGAAAA 6205 >seq952 Length=292072 Score = 86.0 bits (94), Expect = 1e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 4483 TATGTTATTCACTATAAAAATTTGAAACAATGTTTAGATTTAGGTTTAGTTCTTAAGAAA 4542 || ||| | ||||||| |||||| | ||| | || | || ||| || | ||| Sbjct 162505 TACGTTCTACACTATAGAAATTTAATACAGGCTATAAAACATGGATTAAAACTAGAAAAA 162564 Query 4543 ATACACCTAGTCTTGAAATTTGAGCAATCAGACTGGCTCAAATCATATATCGATAAAAAT 4602 || |||| | || |||||| | ||||| ||||| | || ||||| || | ||| Sbjct 162565 ATTCACCGTGCTTTAAAATTTAACCAATCCCCATGGCTAAGTTCGTATATAGAATACAAT 162624 Query 4603 ACCGCATGCCGAAAACTAGCTAAGAATGAGTTCGaaaaaaaCTTTTATAAATTAATGAAT 4662 || | | ||||| ||| || || || |||||| | |||||||||||| | || Sbjct 162625 ACAGAGTTAAGAAAAGGAGCATCCAACGACTTTGAAAAAGATTTTTATAAATTATTAAAC 162684 Query 4663 AATGCGGTTTTTGGAAAGACGATGGAGAATGTACGAAAATATAAAGATAT 4712 || || |||||||| ||||||||||| ||| | |||| | ||||||| Sbjct 162685 AACGCAGTTTTTGGTAAGACGATGGAAAATATCAGAAATCGTCAAGATAT 162734 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 97960243189072