Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Halyomorpha_20halys_20[refseq_20GCF_5F000696795.1_202014-06-03] 12,168 sequences; 1,150,108,890 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq53 131 2e-25 seq2523 129 7e-25 >seq53 Length=1573976 Score = 131 bits (144), Expect = 2e-25 Identities = 166/226 (73%), Gaps = 3/226 (1%) Strand=Plus/Minus Query 33326 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 33385 |||| |||| | || || || || ||||| || ||||| ||||| || || | ||| | Sbjct 796324 CCTCATCTCGAGATATGAGCTCATTTGAAAAGGTAAGTCCTGGCATGAGACCTCTCTTCT 796265 Query 33386 TAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGG 33445 |||||||||| || | ||| || || ||||||||||| |||||||| || |||||||| | Sbjct 796264 TAAGCCAAAAAATAGCAGCAAAGGAGCCAGAAAAGAAAATTCCTTCAACAGCAGCAAACG 796205 Query 33446 CAATAAGTCTCTCTCCATAACCGGCGCTGTCA-TG--TATCCACTTTTGAGCCCAATCGG 33502 | | | |||||| ||| || ||| || | || ||||| | |||||||| | Sbjct 796204 CTACTATTCTCTCACCAAAAGTGGCCGTGGGACTGGAGATCCAAGAAAGTGCCCAATCAG 796145 Query 33503 CCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATA 33548 ||||||| || ||||| ||| ||||| |||||||| || | ||| Sbjct 796144 CCTTCTTCTTAACACACTCCATGGTTTCGATGGCATTGAATAAATA 796099 Score = 102 bits (112), Expect = 1e-16 Identities = 98/126 (78%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 33790 TTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATGTTC 33849 ||||| | ||| ||||| || | |||||||| ||||| || || ||||| ||||| ||| Sbjct 793942 TTAGAGAGATCAACTTCCTCAGCAGTCCAAAAGGATGCTTCAGCTTTTTTGTACATCTTC 793883 Query 33850 CAGATGTCATAATATTGGATTGGGAAAATAACAAATCTATTTGGATTTGGTGCAAGGATG 33909 || || |||| ||||| ||||||||||||||||| || |||| || | ||||| | Sbjct 793882 CATATATCATGATATTCAATTGGGAAAATAACAAACCTCCTTGGGTTATCTTTAAGGAGG 793823 Query 33910 GGTTCC 33915 |||||| Sbjct 793822 GGTTCC 793817 Score = 93.3 bits (102), Expect = 5e-14 Identities = 148/211 (70%), Gaps = 1/211 (0%) Strand=Plus/Minus Query 33119 CCAA-TTCAGAAATCAATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAA 33177 |||| |||| || ||||||||| || || ||||| || ||| |||||||| |||||| Sbjct 796813 CCAAGTTCACCAAGCAATCTATCAGCAACAAATTCGATGTATTGTTTCATCAGATCACAA 796754 Query 33178 TTCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACC 33237 |||||||| || | |||||| || || |||| |||||||| || || ||| ||| Sbjct 796753 TTCATTCCAATCATCGCAACTGGCAGCGCTTCAGTCAGAAATTCCTGCTCTATGACTACA 796694 Query 33238 GCATCTGTTATAATAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAAC 33297 |||| | ||||| |||| | || || ||| || | | || || ||| Sbjct 796693 GCATTACTGATAATTTCGGTAACCCTCTCAACAGATGGTTTCTGAACAAGGTGCTTGAAC 796634 Query 33298 ATCAAACATGCGAAATCGCAGTGCAGACCCT 33328 |||| ||| ||||| || || || ||||||| Sbjct 796633 ATCAGACAAGCGAAGTCACAATGAAGACCCT 796603 Score = 82.4 bits (90), Expect = 1e-10 Identities = 77/98 (79%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 33564 ATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 33623 |||| ||| ||||||||| || | || || ||||| || ||||| | |||||| || || Sbjct 794344 ATCTCTAATATAAGTATCAATGAGCAGGCTGTACATCTCAGAATGCACGTTTTCCATAGC 794285 Query 33624 CATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCT 33661 || ||||| ||||||||||| ||||| || |||| || Sbjct 794284 AATTTGAAAACCGTAGAAACACCTAGCTTCAGTAACCT 794247 >seq2523 Length=169028 Score = 129 bits (142), Expect = 7e-25 Identities = 210/299 (70%), Gaps = 9/299 (3%) Strand=Plus/Minus Query 62783 AGGATAATAATTAATATCTATAATTTTATTGAGATTTC---TGACAATTACTTTGACCAC 62839 |||||||||||| || ||||| || ||||| ||||| | | |||| ||||| || Sbjct 121642 AGGATAATAATTTATGTCTATTATCTTATTTAGATTCCATGTAACAAC--CTTTGTT-AC 121586 Query 62840 ATCCTTCAGTTTGAGAAAATCAAA---TCGCCCATCTATTACAAACATGTTCAAGGCAAC 62896 | | |||| || ||||||| | | || || | | ||| | | || |||| Sbjct 121585 AGCTTTCAACTTTTCAAAATCACAGGTTTTATCAGCTTTCATAAATTTACTTAATGCAAT 121526 Query 62897 AGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCA 62956 ||||| | ||||||||| || | |||| | | | ||||| || || ||||| || Sbjct 121525 TGATGCTAAATTACAAACAGCAATTTCATCTGAAGAAGTATATTCAATAATTTCAGTACA 121466 Query 62957 AAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATC 63016 ||||||||||||||| |||||||||| ||||| ||||| || | || || | ||| Sbjct 121465 AAGATTACTACACTTAATAGTTCCTAGATTTTTCTGATTTGATTTCCTATTGCAAGAATC 121406 Query 63017 CTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGA 63075 ||||| | ||| | || ||||||||||| |||||||| || || |||||||||| Sbjct 121405 TTTATACAACATGTAAGGTACACCAGTTTCAACTTGAGATTCAATGATAGCTTTCCAGA 121347 Score = 107 bits (118), Expect = 2e-18 Identities = 134/182 (74%), Gaps = 4/182 (2%) Strand=Plus/Minus Query 62336 TACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCAC 62395 ||| |||||||| ||||| | |||||| | || ||||||||| || || ||||| | Sbjct 123317 TACCTGAAATTCACCAGAAAGTACTCTTCTTGTATAAATATTAGATGTGTATGGTTCAAA 123258 Query 62396 CGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAA 62455 || |||||||| || |||||||||||||| || ||||| ||||| ||||| | | || Sbjct 123257 TGATTCATTATTGCCTAAAATTTGAGCAGTAGAAGCAGTTGGCATGGGTGCGATAAGCAA 123198 Query 62456 ACTATTTCTAAGACCGTATGTTCTG--ATTTTATCTTTTAGAGGTTCCCAATTCCAAAGA 62513 | ||| | | || ||||| || ||||| ||||| | | |||||| ||||||| Sbjct 123197 AGAATTCCGTAATCC--ATGTTTTGAAATTTTTTCTTTCAATGCAGCCCAATCCCAAAGA 123140 Query 62514 TC 62515 || Sbjct 123139 TC 123138 Score = 87.8 bits (96), Expect = 2e-12 Identities = 104/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 63611 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATT 63670 |||| | ||| | ||||| || || || || || ||||| || |||||| || | ||| Sbjct 113586 AGTTGCAGCACTGAATAATGTGGGTGAGGCATGTGTAAAATATCCTTCAGAGAGCAAATT 113527 Query 63671 GTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAA 63730 ||| || | |||| | | ||||||||| ||| ||||| || || || | ||| || Sbjct 113526 GTATGTTTTAATAACAGCATCTATATCCTCACCATGGATTCCAACAGCAACCCTCATCAA 113467 Query 63731 CATGTGCTGAGGTCTTTCAAC 63751 |||||| |||||||||||||| Sbjct 113466 CATGTGTTGAGGTCTTTCAAC 113446 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622852449730880